RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
TTC39A-201ENST00000262675 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
TTC39A-201ENST00000262675 FAM83GA6ND36 823 aa13.45□□□□□ -0.26
TTC39A-201ENST00000262675 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-201ENST00000262675 LRP5O75197 1615 aa13.45□□□□□ -0.26
TTC39A-201ENST00000262675 BAG6P46379 1132 aa13.45□□□□□ -0.26
TTC39A-201ENST00000262675 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
TTC39A-201ENST00000262675 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
TTC39A-201ENST00000262675 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
TTC39A-201ENST00000262675 TRAK1Q9UPV9 953 aa13.44□□□□□ -0.26
TTC39A-201ENST00000262675 ATP7BP35670 1465 aa13.44□□□□□ -0.26
TTC39A-201ENST00000262675 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
TTC39A-201ENST00000262675 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
TTC39A-201ENST00000262675 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
TTC39A-201ENST00000262675 BTG4Q9NY30 223 aa13.43□□□□□ -0.26
TTC39A-201ENST00000262675 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
TTC39A-201ENST00000262675 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
TTC39A-201ENST00000262675 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
TTC39A-201ENST00000262675 A0A0G2JS52 829 aa13.42□□□□□ -0.26
TTC39A-201ENST00000262675 MYT1Q01538 1121 aa13.42□□□□□ -0.26
TTC39A-201ENST00000262675 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
TTC39A-201ENST00000262675 SPATA31A5Q5VU36 1347 aa13.41□□□□□ -0.26
TTC39A-201ENST00000262675 SPATA31A7Q8IWB4 1347 aa13.41□□□□□ -0.26
TTC39A-201ENST00000262675 THSD7AQ9UPZ6 1657 aa13.4□□□□□ -0.26
TTC39A-201ENST00000262675 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
TTC39A-201ENST00000262675 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
TTC39A-201ENST00000262675 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
TTC39A-201ENST00000262675 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
TTC39A-201ENST00000262675 FAM98CQ17RN3 349 aaKnown RBP13.39□□□□□ -0.27
TTC39A-201ENST00000262675 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
TTC39A-201ENST00000262675 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
TTC39A-201ENST00000262675 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
TTC39A-201ENST00000262675 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
TTC39A-201ENST00000262675 PHRF1Q9P1Y6 1649 aaKnown RBP13.38□□□□□ -0.27
TTC39A-201ENST00000262675 NUDT16Q96DE0 195 aaKnown RBP13.38□□□□□ -0.27
TTC39A-201ENST00000262675 EP400Q96L91 3159 aa13.38□□□□□ -0.27
TTC39A-201ENST00000262675 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
TTC39A-201ENST00000262675 POLR3AO14802 1390 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-201ENST00000262675 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-201ENST00000262675 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
TTC39A-201ENST00000262675 CCER2I3L3R5 266 aa13.37□□□□□ -0.27
TTC39A-201ENST00000262675 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-201ENST00000262675 FAM196AQ6ZSG2 479 aa13.35□□□□□ -0.27
TTC39A-201ENST00000262675 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
TTC39A-201ENST00000262675 SPATA31A1Q5TZJ5 1347 aa13.35□□□□□ -0.27
TTC39A-201ENST00000262675 TNS1Q9HBL0 1735 aaKnown RBP13.35□□□□□ -0.27
TTC39A-201ENST00000262675 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
TTC39A-201ENST00000262675 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
TTC39A-201ENST00000262675 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
TTC39A-201ENST00000262675 CDK19Q9BWU1 502 aa13.34□□□□□ -0.27
TTC39A-201ENST00000262675 CPDO75976 1380 aa13.33□□□□□ -0.28
TTC39A-201ENST00000262675 EVA1CP58658 441 aa13.32□□□□□ -0.28
TTC39A-201ENST00000262675 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
TTC39A-201ENST00000262675 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
TTC39A-201ENST00000262675 THRAP3Q9Y2W1 955 aaKnown RBP13.32□□□□□ -0.28
TTC39A-201ENST00000262675 ACEP12821 1306 aa13.31□□□□□ -0.28
TTC39A-201ENST00000262675 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
TTC39A-201ENST00000262675 ANP32CO43423 234 aa13.31□□□□□ -0.28
TTC39A-201ENST00000262675 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
TTC39A-201ENST00000262675 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
TTC39A-201ENST00000262675 USP19O94966 1318 aa13.3□□□□□ -0.28
TTC39A-201ENST00000262675 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
TTC39A-201ENST00000262675 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
TTC39A-201ENST00000262675 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
TTC39A-201ENST00000262675 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
TTC39A-201ENST00000262675 LMO7Q8WWI1 1683 aa13.29□□□□□ -0.28
TTC39A-201ENST00000262675 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-201ENST00000262675 ZC3H6P61129 1189 aaKnown RBP13.28□□□□□ -0.28
TTC39A-201ENST00000262675 TCP11L2Q8N4U5 519 aa13.28□□□□□ -0.28
TTC39A-201ENST00000262675 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
TTC39A-201ENST00000262675 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-201ENST00000262675 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.28
TTC39A-201ENST00000262675 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.28
TTC39A-201ENST00000262675 RREB1Q92766 1687 aa13.27□□□□□ -0.29
TTC39A-201ENST00000262675 NBPF14Q5TI25 921 aa13.27□□□□□ -0.29
TTC39A-201ENST00000262675 PPIP5K1Q6PFW1 1433 aa13.26□□□□□ -0.29
TTC39A-201ENST00000262675 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
TTC39A-201ENST00000262675 SRPK2P78362 688 aaKnown RBP13.26□□□□□ -0.29
TTC39A-201ENST00000262675 TRIM37O94972 964 aa13.25□□□□□ -0.29
TTC39A-201ENST00000262675 APBA3O96018 575 aa13.25□□□□□ -0.29
TTC39A-201ENST00000262675 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
TTC39A-201ENST00000262675 EZH2Q15910 746 aaKnown RBP13.25□□□□□ -0.29
TTC39A-201ENST00000262675 QRICH2Q9H0J4 1663 aa13.25□□□□□ -0.29
TTC39A-201ENST00000262675 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
TTC39A-201ENST00000262675 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
TTC39A-201ENST00000262675 GCP02774 474 aa13.24□□□□□ -0.29
TTC39A-201ENST00000262675 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
TTC39A-201ENST00000262675 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
TTC39A-201ENST00000262675 SUPT16HQ9Y5B9 1047 aaKnown RBP13.24□□□□□ -0.29
TTC39A-201ENST00000262675 CRB1P82279 1406 aa13.24□□□□□ -0.29
TTC39A-201ENST00000262675 COL5A2P05997 1499 aaPredicted RBP13.24□□□□□ -0.29
TTC39A-201ENST00000262675 NUP188Q5SRE5 1749 aa13.23□□□□□ -0.29
TTC39A-201ENST00000262675 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
TTC39A-201ENST00000262675 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
TTC39A-201ENST00000262675 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
TTC39A-201ENST00000262675 SLIT3O75094 1523 aa13.23□□□□□ -0.29
TTC39A-201ENST00000262675 USP6P35125 1406 aa13.22□□□□□ -0.29
TTC39A-201ENST00000262675 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
TTC39A-201ENST00000262675 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
TTC39A-201ENST00000262675 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms