RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 NGDNQ8NEJ9 315 aaKnown RBP24.67■■□□□ 1.54
GSDMD-201ENST00000262580 ZBED9Q6R2W3 1325 aa24.66■■□□□ 1.54
GSDMD-201ENST00000262580 INSRP06213 1382 aa24.66■■□□□ 1.54
GSDMD-201ENST00000262580 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
GSDMD-201ENST00000262580 ADAMTS8Q9UP79 889 aa24.65■■□□□ 1.54
GSDMD-201ENST00000262580 XIRP1Q702N8 1843 aaKnown RBP24.65■■□□□ 1.54
GSDMD-201ENST00000262580 SENP3-EIF4A1A0A087X0R7 540 aa24.64■■□□□ 1.53
GSDMD-201ENST00000262580 PHF8Q9UPP1 1060 aa24.62■■□□□ 1.53
GSDMD-201ENST00000262580 OVOS2A0A0J9YW53 1432 aa24.62■■□□□ 1.53
GSDMD-201ENST00000262580 OVOS2Q6IE36 1432 aa24.62■■□□□ 1.53
GSDMD-201ENST00000262580 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
GSDMD-201ENST00000262580 C19orf44Q9H6X5 657 aa24.62■■□□□ 1.53
GSDMD-201ENST00000262580 PIK3C2AO00443 1686 aa24.62■■□□□ 1.53
GSDMD-201ENST00000262580 COG3Q96JB2 828 aa24.61■■□□□ 1.53
GSDMD-201ENST00000262580 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
GSDMD-201ENST00000262580 COL3A1P02461 1466 aaPredicted RBP24.61■■□□□ 1.53
GSDMD-201ENST00000262580 MAP2P11137 1827 aaKnown RBP24.6■■□□□ 1.53
GSDMD-201ENST00000262580 ZNF335Q9H4Z2 1342 aaPredicted RBP24.6■■□□□ 1.53
GSDMD-201ENST00000262580 ESCO1Q5FWF5 840 aa24.59■■□□□ 1.53
GSDMD-201ENST00000262580 TTC21AQ8NDW8 1320 aa24.59■■□□□ 1.53
GSDMD-201ENST00000262580 FBLN1P23142 703 aa24.59■■□□□ 1.53
GSDMD-201ENST00000262580 CFAP53Q96M91 514 aa24.59■■□□□ 1.53
GSDMD-201ENST00000262580 DCCP43146 1447 aa24.58■■□□□ 1.53
GSDMD-201ENST00000262580 C1orf167Q5SNV9 1468 aa24.58■■□□□ 1.52
GSDMD-201ENST00000262580 LRRC7Q96NW7 1537 aa24.57■■□□□ 1.52
GSDMD-201ENST00000262580 MST1RQ04912 1400 aa24.56■■□□□ 1.52
GSDMD-201ENST00000262580 AATKQ6ZMQ8 1374 aa24.56■■□□□ 1.52
GSDMD-201ENST00000262580 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
GSDMD-201ENST00000262580 KIF1AQ12756 1690 aa24.56■■□□□ 1.52
GSDMD-201ENST00000262580 MARF1Q9Y4F3 1742 aaKnown RBP24.56■■□□□ 1.52
GSDMD-201ENST00000262580 ORAI2Q96SN7 254 aa24.55■■□□□ 1.52
GSDMD-201ENST00000262580 POLKQ9UBT6 870 aa24.54■■□□□ 1.52
GSDMD-201ENST00000262580 USP54Q70EL1 1684 aa24.54■■□□□ 1.52
GSDMD-201ENST00000262580 PNPLA6Q8IY17 1366 aa24.53■■□□□ 1.52
GSDMD-201ENST00000262580 ATF3P18847 181 aa24.53■■□□□ 1.52
GSDMD-201ENST00000262580 USP31Q70CQ4 1352 aa24.52■■□□□ 1.52
GSDMD-201ENST00000262580 MSH6P52701 1360 aa24.52■■□□□ 1.52
GSDMD-201ENST00000262580 EMILIN1Q9Y6C2 1016 aa24.52■■□□□ 1.52
GSDMD-201ENST00000262580 CCDC146Q8IYE0 955 aa24.51■■□□□ 1.51
GSDMD-201ENST00000262580 CDK12Q9NYV4 1490 aaPredicted RBP24.51■■□□□ 1.51
GSDMD-201ENST00000262580 RRS1Q15050 365 aaKnown RBP24.49■■□□□ 1.51
GSDMD-201ENST00000262580 SALL2Q9Y467 1007 aaPredicted RBP24.49■■□□□ 1.51
GSDMD-201ENST00000262580 PPM1GO15355 546 aaPredicted RBP24.49■■□□□ 1.51
GSDMD-201ENST00000262580 DMRT2Q9Y5R5 561 aa24.49■■□□□ 1.51
GSDMD-201ENST00000262580 PAK3O75914 559 aaPredicted RBP24.48■■□□□ 1.51
GSDMD-201ENST00000262580 TRPM3Q9HCF6 1732 aaPredicted RBP24.48■■□□□ 1.51
GSDMD-201ENST00000262580 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
GSDMD-201ENST00000262580 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
GSDMD-201ENST00000262580 PSME1Q06323 249 aa24.47■■□□□ 1.51
GSDMD-201ENST00000262580 FOXO3O43524 673 aa24.46■■□□□ 1.51
GSDMD-201ENST00000262580 NUTM2GQ5VZR2 741 aa24.45■■□□□ 1.5
GSDMD-201ENST00000262580 DIAPH1O60610 1272 aaKnown RBP24.44■■□□□ 1.5
GSDMD-201ENST00000262580 NLRP6P59044 892 aa24.44■■□□□ 1.5
GSDMD-201ENST00000262580 ABTB2Q8N961 1025 aa24.44■■□□□ 1.5
GSDMD-201ENST00000262580 SOX12O15370 315 aa24.44■■□□□ 1.5
GSDMD-201ENST00000262580 XPCQ01831 940 aaPredicted RBP24.44■■□□□ 1.5
GSDMD-201ENST00000262580 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
GSDMD-201ENST00000262580 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
GSDMD-201ENST00000262580 U2SURPO15042 1029 aaKnown RBP24.42■■□□□ 1.5
GSDMD-201ENST00000262580 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
GSDMD-201ENST00000262580 GTF3C3Q9Y5Q9 886 aa24.42■■□□□ 1.5
GSDMD-201ENST00000262580 IQSEC2Q5JU85 1478 aa24.41■■□□□ 1.5
GSDMD-201ENST00000262580 APAF1O14727 1248 aa24.4■■□□□ 1.5
GSDMD-201ENST00000262580 KRT28Q7Z3Y7 464 aa24.38■■□□□ 1.49
GSDMD-201ENST00000262580 RUNDC1Q96C34 613 aa24.38■■□□□ 1.49
GSDMD-201ENST00000262580 ALS2Q96Q42 1657 aa24.38■■□□□ 1.49
GSDMD-201ENST00000262580 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
GSDMD-201ENST00000262580 IL13P35225 146 aa24.37■■□□□ 1.49
GSDMD-201ENST00000262580 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
GSDMD-201ENST00000262580 NFAT5O94916 1531 aa24.35■■□□□ 1.49
GSDMD-201ENST00000262580 LTN1O94822 1766 aa24.34■■□□□ 1.49
GSDMD-201ENST00000262580 SBNO1A3KN83 1393 aa24.34■■□□□ 1.49
GSDMD-201ENST00000262580 ZNF521Q96K83 1311 aa24.34■■□□□ 1.49
GSDMD-201ENST00000262580 PDE3BQ13370 1112 aa24.33■■□□□ 1.49
GSDMD-201ENST00000262580 SLIT3O75094 1523 aa24.33■■□□□ 1.49
GSDMD-201ENST00000262580 PXDNQ92626 1479 aa24.33■■□□□ 1.48
GSDMD-201ENST00000262580 FLT4P35916 1363 aa24.32■■□□□ 1.48
GSDMD-201ENST00000262580 PLEKHF1Q96S99 279 aa24.32■■□□□ 1.48
GSDMD-201ENST00000262580 NPHP3Q7Z494 1330 aa24.32■■□□□ 1.48
GSDMD-201ENST00000262580 HSP90AB2PQ58FF8 381 aa24.31■■□□□ 1.48
GSDMD-201ENST00000262580 BRINP3Q76B58 766 aa24.31■■□□□ 1.48
GSDMD-201ENST00000262580 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
GSDMD-201ENST00000262580 CDCA7LQ96GN5 454 aa24.31■■□□□ 1.48
GSDMD-201ENST00000262580 LTBP4Q8N2S1 1624 aa24.31■■□□□ 1.48
GSDMD-201ENST00000262580 EIF4A2Q14240 407 aaKnown RBP24.31■■□□□ 1.48
GSDMD-201ENST00000262580 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
GSDMD-201ENST00000262580 LMOD2Q6P5Q4 547 aa24.29■■□□□ 1.48
GSDMD-201ENST00000262580 SLAIN2Q9P270 581 aa24.29■■□□□ 1.48
GSDMD-201ENST00000262580 RRP7AQ9Y3A4 280 aaKnown RBP24.29■■□□□ 1.48
GSDMD-201ENST00000262580 RSPH6AQ9H0K4 717 aa24.29■■□□□ 1.48
GSDMD-201ENST00000262580 AMPHP49418 695 aa24.28■■□□□ 1.48
GSDMD-201ENST00000262580 USP19O94966 1318 aa24.28■■□□□ 1.48
GSDMD-201ENST00000262580 HMOX1P09601 288 aa24.27■■□□□ 1.48
GSDMD-201ENST00000262580 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
GSDMD-201ENST00000262580 MED1Q15648 1581 aaPredicted RBP24.27■■□□□ 1.48
GSDMD-201ENST00000262580 FCHSD2O94868 740 aa24.26■■□□□ 1.47
GSDMD-201ENST00000262580 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
GSDMD-201ENST00000262580 NGEFQ8N5V2 710 aa24.26■■□□□ 1.47
GSDMD-201ENST00000262580 PHRF1Q9P1Y6 1649 aaKnown RBP24.26■■□□□ 1.47
GSDMD-201ENST00000262580 TNS3Q68CZ2 1445 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms