RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 NUTM1Q86Y26 1132 aa4.37□□□□□ -1.71
ATF1-201ENST00000262053 ATP1B4Q9UN42 357 aaPredicted RBP4.37□□□□□ -1.71
ATF1-201ENST00000262053 PCDHGC3Q9UN70 934 aa4.37□□□□□ -1.71
ATF1-201ENST00000262053 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
ATF1-201ENST00000262053 HPS1Q92902 700 aa4.36□□□□□ -1.71
ATF1-201ENST00000262053 SLC27A5Q9Y2P5 690 aa4.36□□□□□ -1.71
ATF1-201ENST00000262053 MSS51Q4VC12 460 aa4.35□□□□□ -1.71
ATF1-201ENST00000262053 CABLES1Q8TDN4 633 aa4.35□□□□□ -1.71
ATF1-201ENST00000262053 MRGPRX2Q96LB1 330 aa4.35□□□□□ -1.71
ATF1-201ENST00000262053 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
ATF1-201ENST00000262053 ERBB4Q15303 1308 aa4.35□□□□□ -1.71
ATF1-201ENST00000262053 J3QL48 77 aa4.34□□□□□ -1.71
ATF1-201ENST00000262053 WNT7BP56706 349 aa4.34□□□□□ -1.71
ATF1-201ENST00000262053 TRIM32Q13049 653 aa4.34□□□□□ -1.71
ATF1-201ENST00000262053 RSBN1LQ6PCB5 846 aaPredicted RBP4.34□□□□□ -1.71
ATF1-201ENST00000262053 RNF19BQ6ZMZ0 732 aa4.34□□□□□ -1.71
ATF1-201ENST00000262053 RIC3Q7Z5B4 369 aa4.34□□□□□ -1.71
ATF1-201ENST00000262053 CLK2P49760 499 aaKnown RBP4.34□□□□□ -1.72
ATF1-201ENST00000262053 MORN1Q5T089 497 aa4.34□□□□□ -1.72
ATF1-201ENST00000262053 ATP6V1AP38606 617 aa4.33□□□□□ -1.72
ATF1-201ENST00000262053 SH3D19Q5HYK7 790 aa4.33□□□□□ -1.72
ATF1-201ENST00000262053 GPAT2Q6NUI2 795 aa4.33□□□□□ -1.72
ATF1-201ENST00000262053 CAPN5O15484 640 aaPredicted RBP4.33□□□□□ -1.72
ATF1-201ENST00000262053 FDX1P10109 184 aa4.33□□□□□ -1.72
ATF1-201ENST00000262053 SKIV2LQ15477 1246 aaKnown RBP4.33□□□□□ -1.72
ATF1-201ENST00000262053 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.33□□□□□ -1.72
ATF1-201ENST00000262053 HRCP23327 699 aa4.32□□□□□ -1.72
ATF1-201ENST00000262053 SCARF1Q14162 830 aa4.32□□□□□ -1.72
ATF1-201ENST00000262053 RTL5Q5HYW3 569 aaPredicted RBP4.32□□□□□ -1.72
ATF1-201ENST00000262053 PRDM9Q9NQV7 894 aa4.32□□□□□ -1.72
ATF1-201ENST00000262053 C6orf229H3BNL8 230 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 TSC1Q92574 1164 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 THAP11Q96EK4 314 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 PSMG3-AS1Q96PY0 264 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 SPTLC1O15269 473 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 VEGFBP49765 207 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 GRIPAP1Q4V328 841 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 RSPH6AQ9H0K4 717 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 ADAMTS8Q9UP79 889 aa4.31□□□□□ -1.72
ATF1-201ENST00000262053 NUTM2BA6NNL0 878 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 NUTM2EB1AL46 878 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 CFAP99D6REC4 459 aa4.3□□□□□ -1.72
ATF1-201ENST00000262053 Q3C1V9 767 aa4.3□□□□□ -1.72
ATF1-201ENST00000262053 NUTM2DQ5VT03 806 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 TRIM46Q7Z4K8 759 aa4.3□□□□□ -1.72
ATF1-201ENST00000262053 NUTM2AQ8IVF1 878 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 WASF2Q9Y6W5 498 aa4.3□□□□□ -1.72
ATF1-201ENST00000262053 USP46P62068 366 aa4.3□□□□□ -1.72
ATF1-201ENST00000262053 RC3H1Q5TC82 1133 aaKnown RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 FAM160A2Q8N612 972 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 SCARF2Q96GP6 870 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 PCMTD1Q96MG8 357 aaPredicted RBP4.3□□□□□ -1.72
ATF1-201ENST00000262053 LILRB3O75022 631 aa4.29□□□□□ -1.72
ATF1-201ENST00000262053 ADAM23O75077 832 aa4.29□□□□□ -1.72
ATF1-201ENST00000262053 MTMR2Q13614 643 aa4.29□□□□□ -1.72
ATF1-201ENST00000262053 GOPCQ9HD26 462 aa4.29□□□□□ -1.72
ATF1-201ENST00000262053 PER1O15534 1290 aaPredicted RBP4.29□□□□□ -1.72
ATF1-201ENST00000262053 ALDH1A1P00352 501 aa4.29□□□□□ -1.72
ATF1-201ENST00000262053 DIXDC1Q155Q3 683 aa4.29□□□□□ -1.72
ATF1-201ENST00000262053 RFC5P40937 340 aa4.28□□□□□ -1.72
ATF1-201ENST00000262053 MARSP56192 900 aaKnown RBP4.28□□□□□ -1.72
ATF1-201ENST00000262053 CTDSPL2Q05D32 466 aa4.28□□□□□ -1.72
ATF1-201ENST00000262053 BRICD5Q6PL45 260 aa4.28□□□□□ -1.72
ATF1-201ENST00000262053 MSTNO14793 375 aa4.27□□□□□ -1.73
ATF1-201ENST00000262053 MMP16P51512 607 aa4.27□□□□□ -1.73
ATF1-201ENST00000262053 HOMEZQ8IX15 550 aa4.27□□□□□ -1.73
ATF1-201ENST00000262053 PRR7Q8TB68 274 aa4.27□□□□□ -1.73
ATF1-201ENST00000262053 ZBTB3Q9H5J0 574 aa4.27□□□□□ -1.73
ATF1-201ENST00000262053 AP1G2O75843 785 aa4.27□□□□□ -1.73
ATF1-201ENST00000262053 USB1Q9BQ65 265 aaKnown RBP4.27□□□□□ -1.73
ATF1-201ENST00000262053 HMX1Q9NP08 348 aaPredicted RBP4.27□□□□□ -1.73
ATF1-201ENST00000262053 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
ATF1-201ENST00000262053 EPS8L1Q8TE68 723 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 LRRN4Q8WUT4 740 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 ZFP42Q96MM3 310 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 SNRKQ9NRH2 765 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 BMP1P13497 986 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 IRS1P35568 1242 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 RETREG3Q86VR2 466 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
ATF1-201ENST00000262053 GJA5P36382 358 aa4.25□□□□□ -1.73
ATF1-201ENST00000262053 PRPF38BQ5VTL8 546 aaKnown RBP4.25□□□□□ -1.73
ATF1-201ENST00000262053 PPP2R2DQ66LE6 453 aa4.25□□□□□ -1.73
ATF1-201ENST00000262053 ZMYND15Q9H091 742 aa4.25□□□□□ -1.73
ATF1-201ENST00000262053 MAP10Q9P2G4 905 aa4.24□□□□□ -1.73
ATF1-201ENST00000262053 USP17L8P0C7I0 530 aa4.24□□□□□ -1.73
ATF1-201ENST00000262053 MRPL14Q6P1L8 145 aaKnown RBP4.24□□□□□ -1.73
ATF1-201ENST00000262053 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 BTBD11A6QL63 1104 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 DXOO77932 396 aaKnown RBP4.23□□□□□ -1.73
ATF1-201ENST00000262053 TUSC1Q2TAM9 212 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 MTMR14Q8NCE2 650 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 EHBP1Q8NDI1 1231 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 POM121Q96HA1 1249 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 PHF20L1A8MW92 1017 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 PPFIA3O75145 1194 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 FLIIQ13045 1269 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 MCM6Q14566 821 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 NR6A1Q15406 480 aa4.23□□□□□ -1.73
ATF1-201ENST00000262053 CCDC24Q8N4L8 307 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms