RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 ARAP3Q8WWN8 1544 aa12.87□□□□□ -0.35
KPNA3-201ENST00000261667 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
KPNA3-201ENST00000261667 GOLIM4O00461 696 aa12.86□□□□□ -0.35
KPNA3-201ENST00000261667 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
KPNA3-201ENST00000261667 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
KPNA3-201ENST00000261667 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
KPNA3-201ENST00000261667 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
KPNA3-201ENST00000261667 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
KPNA3-201ENST00000261667 ZNF644Q9H582 1327 aaPredicted RBP12.85□□□□□ -0.35
KPNA3-201ENST00000261667 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
KPNA3-201ENST00000261667 ROCK2O75116 1388 aaKnown RBP12.85□□□□□ -0.35
KPNA3-201ENST00000261667 ABCA9Q8IUA7 1624 aa12.85□□□□□ -0.35
KPNA3-201ENST00000261667 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
KPNA3-201ENST00000261667 TERF1P54274 439 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 STK11IPQ8N1F8 1099 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
KPNA3-201ENST00000261667 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
KPNA3-201ENST00000261667 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
KPNA3-201ENST00000261667 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
KPNA3-201ENST00000261667 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
KPNA3-201ENST00000261667 DYDC1Q8WWB3 177 aa12.83□□□□□ -0.36
KPNA3-201ENST00000261667 RSPH14Q9UHP6 348 aa12.83□□□□□ -0.36
KPNA3-201ENST00000261667 DRC1Q96MC2 740 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 PAIP2Q9BPZ3 127 aaKnown RBP12.82□□□□□ -0.36
KPNA3-201ENST00000261667 ZKSCAN5Q9Y2L8 839 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 FEZ1Q99689 392 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 OGFRQ9NZT2 677 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 KDM5DQ9BY66 1539 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 PLXNC1O60486 1568 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
KPNA3-201ENST00000261667 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
KPNA3-201ENST00000261667 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
KPNA3-201ENST00000261667 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 SLC26A8Q96RN1 970 aa12.82□□□□□ -0.36
KPNA3-201ENST00000261667 TXLNBQ8N3L3 684 aa12.81□□□□□ -0.36
KPNA3-201ENST00000261667 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
KPNA3-201ENST00000261667 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
KPNA3-201ENST00000261667 SYCE3A1L190 88 aa12.81□□□□□ -0.36
KPNA3-201ENST00000261667 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
KPNA3-201ENST00000261667 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
KPNA3-201ENST00000261667 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
KPNA3-201ENST00000261667 MEX3CQ5U5Q3 659 aaKnown RBP12.8□□□□□ -0.36
KPNA3-201ENST00000261667 ABCC1P33527 1531 aa12.8□□□□□ -0.36
KPNA3-201ENST00000261667 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
KPNA3-201ENST00000261667 NEFHP12036 1026 aa12.79□□□□□ -0.36
KPNA3-201ENST00000261667 LMAN1P49257 510 aa12.79□□□□□ -0.36
KPNA3-201ENST00000261667 UBXN4Q92575 508 aa12.79□□□□□ -0.36
KPNA3-201ENST00000261667 GABPB1Q06547 395 aaPredicted RBP12.79□□□□□ -0.36
KPNA3-201ENST00000261667 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
KPNA3-201ENST00000261667 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
KPNA3-201ENST00000261667 BMS1Q14692 1282 aaKnown RBP12.79□□□□□ -0.36
KPNA3-201ENST00000261667 ERCC4Q92889 916 aaPredicted RBP12.79□□□□□ -0.36
KPNA3-201ENST00000261667 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
KPNA3-201ENST00000261667 ZBTB9Q96C00 473 aa12.79□□□□□ -0.36
KPNA3-201ENST00000261667 RUFY1Q96T51 708 aa12.78□□□□□ -0.36
KPNA3-201ENST00000261667 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
KPNA3-201ENST00000261667 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
KPNA3-201ENST00000261667 PZPP20742 1482 aa12.78□□□□□ -0.36
KPNA3-201ENST00000261667 HMGB1P09429 215 aaKnown RBP12.78□□□□□ -0.36
KPNA3-201ENST00000261667 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
KPNA3-201ENST00000261667 SMG6Q86US8 1419 aaKnown RBP12.78□□□□□ -0.36
KPNA3-201ENST00000261667 KIAA1107Q9UPP5 1409 aa12.78□□□□□ -0.36
KPNA3-201ENST00000261667 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
KPNA3-201ENST00000261667 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
KPNA3-201ENST00000261667 CCDC70Q6NSX1 233 aa12.77□□□□□ -0.36
KPNA3-201ENST00000261667 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.37
KPNA3-201ENST00000261667 WDR7Q9Y4E6 1490 aa12.77□□□□□ -0.37
KPNA3-201ENST00000261667 PLCH2O75038 1416 aa12.77□□□□□ -0.37
KPNA3-201ENST00000261667 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.37
KPNA3-201ENST00000261667 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
KPNA3-201ENST00000261667 UNC13BO14795 1591 aa12.76□□□□□ -0.37
KPNA3-201ENST00000261667 NF2P35240 595 aa12.76□□□□□ -0.37
KPNA3-201ENST00000261667 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
KPNA3-201ENST00000261667 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
KPNA3-201ENST00000261667 CCDC184Q52MB2 194 aa12.76□□□□□ -0.37
KPNA3-201ENST00000261667 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
KPNA3-201ENST00000261667 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
KPNA3-201ENST00000261667 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
KPNA3-201ENST00000261667 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 HS1BP3Q53T59 392 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 CPSF2Q9P2I0 782 aaKnown RBP12.75□□□□□ -0.37
KPNA3-201ENST00000261667 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
KPNA3-201ENST00000261667 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
KPNA3-201ENST00000261667 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
KPNA3-201ENST00000261667 RGL3Q3MIN7 710 aa12.74□□□□□ -0.37
KPNA3-201ENST00000261667 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
KPNA3-201ENST00000261667 SOX12O15370 315 aa12.74□□□□□ -0.37
KPNA3-201ENST00000261667 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
KPNA3-201ENST00000261667 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms