RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 APLP2Q06481 763 aa22.36■■□□□ 1.17
RABEPK-201ENST00000259460 PHF8Q9UPP1 1060 aa22.36■■□□□ 1.17
RABEPK-201ENST00000259460 TRPM3Q9HCF6 1732 aaPredicted RBP22.35■■□□□ 1.17
RABEPK-201ENST00000259460 CRYBG1Q9Y4K1 1723 aa22.34■■□□□ 1.17
RABEPK-201ENST00000259460 STK26Q9P289 416 aa22.33■■□□□ 1.17
RABEPK-201ENST00000259460 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
RABEPK-201ENST00000259460 ALS2Q96Q42 1657 aa22.33■■□□□ 1.17
RABEPK-201ENST00000259460 RGPD3A6NKT7 1758 aaPredicted RBP22.33■■□□□ 1.17
RABEPK-201ENST00000259460 RGPD4Q7Z3J3 1758 aa22.33■■□□□ 1.17
RABEPK-201ENST00000259460 SPATA31A1Q5TZJ5 1347 aa22.32■■□□□ 1.16
RABEPK-201ENST00000259460 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
RABEPK-201ENST00000259460 ZBTB7AO95365 584 aa22.3■■□□□ 1.16
RABEPK-201ENST00000259460 FHDC1Q9C0D6 1143 aaPredicted RBP22.29■■□□□ 1.16
RABEPK-201ENST00000259460 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
RABEPK-201ENST00000259460 PDGFDQ9GZP0 370 aaPredicted RBP22.28■■□□□ 1.16
RABEPK-201ENST00000259460 PTGER2P43116 358 aa22.27■■□□□ 1.16
RABEPK-201ENST00000259460 PDE3BQ13370 1112 aa22.27■■□□□ 1.16
RABEPK-201ENST00000259460 SYT17Q9BSW7 474 aa22.27■■□□□ 1.16
RABEPK-201ENST00000259460 RPGRIP1LQ68CZ1 1315 aa22.25■■□□□ 1.15
RABEPK-201ENST00000259460 SHANK3Q9BYB0 1731 aa22.25■■□□□ 1.15
RABEPK-201ENST00000259460 PRDM11Q9NQV5 511 aa22.25■■□□□ 1.15
RABEPK-201ENST00000259460 ATF5Q9Y2D1 282 aaPredicted RBP22.24■■□□□ 1.15
RABEPK-201ENST00000259460 STRN4Q9NRL3 753 aa22.23■■□□□ 1.15
RABEPK-201ENST00000259460 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
RABEPK-201ENST00000259460 ABCC11Q96J66 1382 aa22.22■■□□□ 1.15
RABEPK-201ENST00000259460 PMFBP1Q8TBY8 1022 aa22.21■■□□□ 1.15
RABEPK-201ENST00000259460 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.14
RABEPK-201ENST00000259460 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
RABEPK-201ENST00000259460 SBF2Q86WG5 1849 aa22.18■■□□□ 1.14
RABEPK-201ENST00000259460 PARP4Q9UKK3 1724 aaKnown RBP22.18■■□□□ 1.14
RABEPK-201ENST00000259460 KIAA0232Q92628 1395 aa22.17■■□□□ 1.14
RABEPK-201ENST00000259460 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
RABEPK-201ENST00000259460 YTHDC2Q9H6S0 1430 aaKnown RBP22.16■■□□□ 1.14
RABEPK-201ENST00000259460 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
RABEPK-201ENST00000259460 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
RABEPK-201ENST00000259460 BARGINQ6ZT62 677 aa22.16■■□□□ 1.14
RABEPK-201ENST00000259460 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
RABEPK-201ENST00000259460 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
RABEPK-201ENST00000259460 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
RABEPK-201ENST00000259460 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.13
RABEPK-201ENST00000259460 GPRASP1Q5JY77 1395 aa22.13■■□□□ 1.13
RABEPK-201ENST00000259460 OVOS2A0A0G2JMS6 1433 aa22.13■■□□□ 1.13
RABEPK-201ENST00000259460 OVOS2A0A0J9YW53 1432 aa22.13■■□□□ 1.13
RABEPK-201ENST00000259460 OVOS2Q6IE36 1432 aa22.13■■□□□ 1.13
RABEPK-201ENST00000259460 GPR162Q16538 588 aa22.12■■□□□ 1.13
RABEPK-201ENST00000259460 PLSCR1O15162 318 aa22.1■■□□□ 1.13
RABEPK-201ENST00000259460 ITGAEP38570 1179 aa22.09■■□□□ 1.13
RABEPK-201ENST00000259460 SGIP1Q9BQI5 828 aa22.09■■□□□ 1.13
RABEPK-201ENST00000259460 MTFR1LQ9H019 292 aa22.09■■□□□ 1.13
RABEPK-201ENST00000259460 MAP3K5Q99683 1374 aa22.09■■□□□ 1.13
RABEPK-201ENST00000259460 LRRC37A3O60309 1634 aa22.08■■□□□ 1.13
RABEPK-201ENST00000259460 GOLGB1Q14789 3259 aaKnown RBP22.08■■□□□ 1.13
RABEPK-201ENST00000259460 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.13
RABEPK-201ENST00000259460 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
RABEPK-201ENST00000259460 STK32BQ9NY57 414 aa22.07■■□□□ 1.12
RABEPK-201ENST00000259460 EVA1CP58658 441 aa22.06■■□□□ 1.12
RABEPK-201ENST00000259460 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
RABEPK-201ENST00000259460 ARXQ96QS3 562 aa22.06■■□□□ 1.12
RABEPK-201ENST00000259460 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
RABEPK-201ENST00000259460 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
RABEPK-201ENST00000259460 PAK3O75914 559 aaPredicted RBP22.06■■□□□ 1.12
RABEPK-201ENST00000259460 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
RABEPK-201ENST00000259460 HSPA6P17066 643 aa22.05■■□□□ 1.12
RABEPK-201ENST00000259460 ZC3H6P61129 1189 aaKnown RBP22.05■■□□□ 1.12
RABEPK-201ENST00000259460 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
RABEPK-201ENST00000259460 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
RABEPK-201ENST00000259460 ATP7BP35670 1465 aa22.03■■□□□ 1.12
RABEPK-201ENST00000259460 SIRT1Q96EB6 747 aa22.03■■□□□ 1.12
RABEPK-201ENST00000259460 SLC15A2Q16348 729 aa22.02■■□□□ 1.12
RABEPK-201ENST00000259460 PTF1AQ7RTS3 328 aa22.02■■□□□ 1.12
RABEPK-201ENST00000259460 PROM2Q8N271 834 aa22.02■■□□□ 1.12
RABEPK-201ENST00000259460 ATP10DQ9P241 1426 aa22■■□□□ 1.11
RABEPK-201ENST00000259460 PRAM1Q96QH2 718 aa22■■□□□ 1.11
RABEPK-201ENST00000259460 DHX57Q6P158 1386 aaKnown RBP21.99■■□□□ 1.11
RABEPK-201ENST00000259460 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
RABEPK-201ENST00000259460 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
RABEPK-201ENST00000259460 KLHL34Q8N239 644 aa21.99■■□□□ 1.11
RABEPK-201ENST00000259460 THRAP3Q9Y2W1 955 aaKnown RBP21.99■■□□□ 1.11
RABEPK-201ENST00000259460 TULP4Q9NRJ4 1543 aa21.99■■□□□ 1.11
RABEPK-201ENST00000259460 TOPAZ1Q8N9V7 1692 aa21.98■■□□□ 1.11
RABEPK-201ENST00000259460 WNK3Q9BYP7 1800 aa21.97■■□□□ 1.11
RABEPK-201ENST00000259460 CAPN15O75808 1086 aa21.97■■□□□ 1.11
RABEPK-201ENST00000259460 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
RABEPK-201ENST00000259460 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
RABEPK-201ENST00000259460 NGDNQ8NEJ9 315 aaKnown RBP21.96■■□□□ 1.11
RABEPK-201ENST00000259460 RGL3Q3MIN7 710 aa21.95■■□□□ 1.1
RABEPK-201ENST00000259460 ITSN1Q15811 1721 aa21.95■■□□□ 1.1
RABEPK-201ENST00000259460 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
RABEPK-201ENST00000259460 COL5A2P05997 1499 aaPredicted RBP21.93■■□□□ 1.1
RABEPK-201ENST00000259460 PAPPAQ13219 1627 aa21.93■■□□□ 1.1
RABEPK-201ENST00000259460 NUTM2GQ5VZR2 741 aa21.93■■□□□ 1.1
RABEPK-201ENST00000259460 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
RABEPK-201ENST00000259460 HIRIP3Q9BW71 556 aaPredicted RBP21.92■■□□□ 1.1
RABEPK-201ENST00000259460 GPBP1L1Q9HC44 474 aaPredicted RBP21.91■■□□□ 1.1
RABEPK-201ENST00000259460 POGKQ9P215 609 aa21.91■■□□□ 1.1
RABEPK-201ENST00000259460 CRB1P82279 1406 aa21.9■■□□□ 1.1
RABEPK-201ENST00000259460 DDB1Q16531 1140 aa21.9■■□□□ 1.1
RABEPK-201ENST00000259460 AATKQ6ZMQ8 1374 aa21.88■■□□□ 1.09
RABEPK-201ENST00000259460 CPDO75976 1380 aa21.87■■□□□ 1.09
RABEPK-201ENST00000259460 NLGN2Q8NFZ4 835 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms