RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 KIAA0754O94854 1291 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 RUSC2Q8N2Y8 1516 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 CCDC192P0DO97 292 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 CCDC141Q6ZP82 1450 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 DNMBPQ6XZF7 1577 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 PBRM1Q86U86 1689 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 ANKRD1Q15327 319 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 FILIP1LQ4L180 1135 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.73□□□□□ -1.49
RC3H1-201ENST00000258349 EIF3JO75822 258 aaKnown RBP5.73□□□□□ -1.49
RC3H1-201ENST00000258349 CT47B1P0C2W7 299 aaPredicted RBP5.73□□□□□ -1.49
RC3H1-201ENST00000258349 SLC3A2P08195 630 aaKnown RBP5.73□□□□□ -1.49
RC3H1-201ENST00000258349 JMYQ8N9B5 988 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 GOLGA6L7A0A1B0GV03 622 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 APAF1O14727 1248 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 PDIA4P13667 645 aaKnown RBP5.73□□□□□ -1.49
RC3H1-201ENST00000258349 AEBP1Q8IUX7 1158 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 SDF4Q9BRK5 362 aa5.73□□□□□ -1.49
RC3H1-201ENST00000258349 POLR1AO95602 1720 aaPredicted RBP5.73□□□□□ -1.49
RC3H1-201ENST00000258349 SYNJ2O15056 1496 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 FKBP5Q13451 457 aaPredicted RBP5.72□□□□□ -1.49
RC3H1-201ENST00000258349 STIM1Q13586 685 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 INCENPQ9NQS7 918 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 ARAP1Q96P48 1450 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 ZNHIT6Q9NWK9 470 aaKnown RBP5.72□□□□□ -1.49
RC3H1-201ENST00000258349 UBTFL1P0CB47 393 aaPredicted RBP5.72□□□□□ -1.49
RC3H1-201ENST00000258349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.72□□□□□ -1.491e-8■■■■□ 24.7
RC3H1-201ENST00000258349 DACH1Q9UI36 760 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 C9orf84Q5VXU9 1444 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 OFD1O75665 1012 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 AKNAQ7Z591 1439 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 CBFA2T2O43439 604 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 EVA1CP58658 441 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 TSPYL4Q9UJ04 414 aa5.72□□□□□ -1.49
RC3H1-201ENST00000258349 ERLIN1O75477 346 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 PANK1Q8TE04 598 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 ANKRD50Q9ULJ7 1429 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 USP8P40818 1118 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 FOSBP53539 338 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 LNPKQ9C0E8 428 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 WASHC2AQ641Q2 1341 aa5.71□□□□□ -1.49
RC3H1-201ENST00000258349 PKNOX2Q96KN3 472 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 NUTM2DQ5VT03 806 aaPredicted RBP5.71□□□□□ -1.5
RC3H1-201ENST00000258349 EIF2S2P20042 333 aaKnown RBP5.71□□□□□ -1.5
RC3H1-201ENST00000258349 TRHP20396 242 aaPredicted RBP5.71□□□□□ -1.5
RC3H1-201ENST00000258349 AXDND1Q5T1B0 1012 aaPredicted RBP5.71□□□□□ -1.5
RC3H1-201ENST00000258349 ANKRD18AQ8IVF6 992 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 PLEKHH1Q9ULM0 1364 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 WDR33Q9C0J8 1336 aaKnown RBP5.71□□□□□ -1.5
RC3H1-201ENST00000258349 GCC1Q96CN9 775 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 CDK5RAP3Q96JB5 506 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 PTPRGP23470 1445 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 ERBINQ96RT1 1412 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 HFM1A2PYH4 1435 aa5.71□□□□□ -1.5
RC3H1-201ENST00000258349 GCC2Q8IWJ2 1684 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 PDE3AQ14432 1141 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 TNMDQ9H2S6 317 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 UQCRHLA0A096LP55 91 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 UQCRHP07919 91 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 HMGXB3Q12766 1538 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 MINK1Q8N4C8 1332 aaPredicted RBP5.7□□□□□ -1.5
RC3H1-201ENST00000258349 PPFIBP1Q86W92 1011 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 SRCIN1Q9C0H9 1055 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 CIZ1Q9ULV3 898 aaPredicted RBP5.7□□□□□ -1.5
RC3H1-201ENST00000258349 CCDC30Q5VVM6 783 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 TSPYL1Q9H0U9 437 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 KIF2AO00139 706 aaPredicted RBP5.7□□□□□ -1.5
RC3H1-201ENST00000258349 MYO10Q9HD67 2058 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 DAPK1P53355 1430 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 GNAI3P08754 354 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 TBC1D2BQ9UPU7 963 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 CFTRP13569 1480 aa5.7□□□□□ -1.5
RC3H1-201ENST00000258349 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
RC3H1-201ENST00000258349 THOC2Q8NI27 1593 aaKnown RBP5.7□□□□□ -1.5
RC3H1-201ENST00000258349 NKTRP30414 1462 aaKnown RBP5.69□□□□□ -1.5
RC3H1-201ENST00000258349 RAD21O60216 631 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 KIAA1107Q9UPP5 1409 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 CCDC112Q8NEF3 446 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 EPRSP07814 1512 aaKnown RBP5.69□□□□□ -1.5
RC3H1-201ENST00000258349 SYCP1Q15431 976 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 GRPEL1Q9HAV7 217 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 PSME1Q06323 249 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 SEPT7Q16181 437 aaKnown RBP5.69□□□□□ -1.5
RC3H1-201ENST00000258349 FSD1Q9BTV5 496 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 ELL2O00472 640 aaPredicted RBP5.69□□□□□ -1.5
RC3H1-201ENST00000258349 CNKSR2Q8WXI2 1034 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.69□□□□□ -1.51e-6■■■■□ 20.6
RC3H1-201ENST00000258349 K7ELQ4 463 aaPredicted RBP5.69□□□□□ -1.5
RC3H1-201ENST00000258349 CDKL5O76039 1030 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 GNAI2P04899 355 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 CCDC27Q2M243 656 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 MCM3P25205 808 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 CCT4P50991 539 aaKnown RBP5.69□□□□□ -1.5
RC3H1-201ENST00000258349 TTLL5Q6EMB2 1281 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 KIF6Q6ZMV9 814 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 RIC3Q7Z5B4 369 aa5.69□□□□□ -1.5
RC3H1-201ENST00000258349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.68□□□□□ -1.5
RC3H1-201ENST00000258349 BRPF3Q9ULD4 1205 aa5.68□□□□□ -1.5
RC3H1-201ENST00000258349 CCAR1Q8IX12 1150 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms