RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
PUM1-201ENST00000257075 CCDC158Q5M9N0 1113 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 SART3Q15020 963 aaKnown RBP12.92□□□□□ -0.34
PUM1-201ENST00000257075 WAPLQ7Z5K2 1190 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 TEX14Q8IWB6 1497 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 KIAA1107Q9UPP5 1409 aa12.92□□□□□ -0.34
PUM1-201ENST00000257075 SURF6O75683 361 aaKnown RBP12.91□□□□□ -0.34
PUM1-201ENST00000257075 CCDC57Q2TAC2 916 aa12.91□□□□□ -0.34
PUM1-201ENST00000257075 PAXIP1Q6ZW49 1069 aaPredicted RBP12.91□□□□□ -0.34
PUM1-201ENST00000257075 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
PUM1-201ENST00000257075 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
PUM1-201ENST00000257075 KIF7Q2M1P5 1343 aa12.91□□□□□ -0.34
PUM1-201ENST00000257075 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
PUM1-201ENST00000257075 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
PUM1-201ENST00000257075 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
PUM1-201ENST00000257075 RRS1Q15050 365 aaKnown RBP12.9□□□□□ -0.34
PUM1-201ENST00000257075 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
PUM1-201ENST00000257075 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
PUM1-201ENST00000257075 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
PUM1-201ENST00000257075 ZSCAN29Q8IWY8 852 aaPredicted RBP12.9□□□□□ -0.34
PUM1-201ENST00000257075 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
PUM1-201ENST00000257075 PTCD1O75127 700 aaKnown RBP12.9□□□□□ -0.34
PUM1-201ENST00000257075 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
PUM1-201ENST00000257075 CNTLNQ9NXG0 1405 aa12.9□□□□□ -0.35
PUM1-201ENST00000257075 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 XBP1P17861 261 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 BRMS1Q9HCU9 246 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 TPM3P06753 285 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 WWC2Q6AWC2 1192 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
PUM1-201ENST00000257075 IGHMBP2P38935 993 aaKnown RBP12.89□□□□□ -0.35
PUM1-201ENST00000257075 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
PUM1-201ENST00000257075 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
PUM1-201ENST00000257075 FOXD4L5Q5VV16 416 aaPredicted RBP12.88□□□□□ -0.35
PUM1-201ENST00000257075 FOXD4L4Q8WXT5 416 aaPredicted RBP12.88□□□□□ -0.35
PUM1-201ENST00000257075 IDI1Q13907 227 aa12.88□□□□□ -0.35
PUM1-201ENST00000257075 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
PUM1-201ENST00000257075 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■□□□ 14
PUM1-201ENST00000257075 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
PUM1-201ENST00000257075 TNRQ92752 1358 aa12.87□□□□□ -0.35
PUM1-201ENST00000257075 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
PUM1-201ENST00000257075 AK7Q96M32 723 aa12.87□□□□□ -0.35
PUM1-201ENST00000257075 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
PUM1-201ENST00000257075 PRXQ9BXM0 1461 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 DAPK1P53355 1430 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 FANCAO15360 1455 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 PHF14O94880 888 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
PUM1-201ENST00000257075 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
PUM1-201ENST00000257075 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
PUM1-201ENST00000257075 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
PUM1-201ENST00000257075 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
PUM1-201ENST00000257075 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
PUM1-201ENST00000257075 TPM1P09493 284 aa12.85□□□□□ -0.35
PUM1-201ENST00000257075 INTS3Q68E01 1043 aaKnown RBP12.85□□□□□ -0.35
PUM1-201ENST00000257075 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
PUM1-201ENST00000257075 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
PUM1-201ENST00000257075 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
PUM1-201ENST00000257075 GNAI2P04899 355 aa12.84□□□□□ -0.35
PUM1-201ENST00000257075 RRP12Q5JTH9 1297 aaKnown RBP12.84□□□□□ -0.35
PUM1-201ENST00000257075 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
PUM1-201ENST00000257075 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
PUM1-201ENST00000257075 HSPA2P54652 639 aa12.84□□□□□ -0.35
PUM1-201ENST00000257075 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
PUM1-201ENST00000257075 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
PUM1-201ENST00000257075 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
PUM1-201ENST00000257075 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
PUM1-201ENST00000257075 RPGRQ92834 1020 aaKnown RBP12.83□□□□□ -0.36
PUM1-201ENST00000257075 FAM135AQ9P2D6 1515 aa12.83□□□□□ -0.36
PUM1-201ENST00000257075 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
PUM1-201ENST00000257075 EXOSC9Q06265 439 aaKnown RBP12.83□□□□□ -0.36
PUM1-201ENST00000257075 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
PUM1-201ENST00000257075 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
PUM1-201ENST00000257075 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.36
PUM1-201ENST00000257075 HIP1O00291 1037 aa12.83□□□□□ -0.36
PUM1-201ENST00000257075 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
PUM1-201ENST00000257075 NPHP3Q7Z494 1330 aa12.82□□□□□ -0.36
PUM1-201ENST00000257075 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
PUM1-201ENST00000257075 LNPKQ9C0E8 428 aa12.82□□□□□ -0.36
PUM1-201ENST00000257075 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
PUM1-201ENST00000257075 BECN2A8MW95 431 aa12.82□□□□□ -0.36
PUM1-201ENST00000257075 AAMPQ13685 434 aa12.82□□□□□ -0.36
PUM1-201ENST00000257075 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
PUM1-201ENST00000257075 SIL1Q9H173 461 aa12.81□□□□□ -0.36
PUM1-201ENST00000257075 PSMA5P28066 241 aa12.81□□□□□ -0.36
PUM1-201ENST00000257075 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
PUM1-201ENST00000257075 RAI14Q9P0K7 980 aa12.81□□□□□ -0.36
PUM1-201ENST00000257075 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
PUM1-201ENST00000257075 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
PUM1-201ENST00000257075 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms