RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 CTDP1Q9Y5B0 961 aaPredicted RBP22.14■■□□□ 1.14
EFR3A-201ENST00000254624 FBXW7Q969H0 707 aa22.14■■□□□ 1.14
EFR3A-201ENST00000254624 CCT4P50991 539 aaKnown RBP22.14■■□□□ 1.13
EFR3A-201ENST00000254624 HDGFL1Q5TGJ6 251 aa22.14■■□□□ 1.13
EFR3A-201ENST00000254624 DDX49Q9Y6V7 483 aaKnown RBP22.13■■□□□ 1.13
EFR3A-201ENST00000254624 GNAI2P04899 355 aa22.13■■□□□ 1.13
EFR3A-201ENST00000254624 GCC1Q96CN9 775 aa22.13■■□□□ 1.13
EFR3A-201ENST00000254624 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
EFR3A-201ENST00000254624 NFXL1Q6ZNB6 911 aa22.12■■□□□ 1.13
EFR3A-201ENST00000254624 PRDM11Q9NQV5 511 aa22.12■■□□□ 1.13
EFR3A-201ENST00000254624 SURF6O75683 361 aaKnown RBP22.11■■□□□ 1.13
EFR3A-201ENST00000254624 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
EFR3A-201ENST00000254624 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
EFR3A-201ENST00000254624 HIP1O00291 1037 aa22.1■■□□□ 1.13
EFR3A-201ENST00000254624 WASHC4Q2M389 1173 aa22.1■■□□□ 1.13
EFR3A-201ENST00000254624 RALYLQ86SE5 291 aaKnown RBP22.1■■□□□ 1.13
EFR3A-201ENST00000254624 ZNF428Q96B54 188 aa22.1■■□□□ 1.13
EFR3A-201ENST00000254624 TPD52L1Q16890 204 aaPredicted RBP22.1■■□□□ 1.13
EFR3A-201ENST00000254624 NOB1Q9ULX3 412 aaKnown RBP22.1■■□□□ 1.13
EFR3A-201ENST00000254624 TBC1D2BQ9UPU7 963 aa22.09■■□□□ 1.13
EFR3A-201ENST00000254624 C22orf23Q9BZE7 217 aa22.09■■□□□ 1.13
EFR3A-201ENST00000254624 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
EFR3A-201ENST00000254624 CREBRFQ8IUR6 639 aa22.09■■□□□ 1.13
EFR3A-201ENST00000254624 CHMP5Q9NZZ3 219 aa22.09■■□□□ 1.13
EFR3A-201ENST00000254624 PSMA5P28066 241 aa22.08■■□□□ 1.13
EFR3A-201ENST00000254624 TSR2Q969E8 191 aaKnown RBP22.08■■□□□ 1.12
EFR3A-201ENST00000254624 SMC3Q9UQE7 1217 aa22.08■■□□□ 1.12
EFR3A-201ENST00000254624 RAD21O60216 631 aa22.07■■□□□ 1.12
EFR3A-201ENST00000254624 RRS1Q15050 365 aaKnown RBP22.07■■□□□ 1.12
EFR3A-201ENST00000254624 FSD1Q9BTV5 496 aa22.07■■□□□ 1.12
EFR3A-201ENST00000254624 DHX16O60231 1041 aaKnown RBP22.07■■□□□ 1.12
EFR3A-201ENST00000254624 TPM2P07951 284 aa22.07■■□□□ 1.12
EFR3A-201ENST00000254624 NUCB2P80303 420 aa22.07■■□□□ 1.12
EFR3A-201ENST00000254624 CCDC47Q96A33 483 aaKnown RBP22.07■■□□□ 1.12
EFR3A-201ENST00000254624 GOLGA6L19H0YKK7 550 aa22.06■■□□□ 1.12
EFR3A-201ENST00000254624 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
EFR3A-201ENST00000254624 NFE2L2Q16236 605 aa22.06■■□□□ 1.12
EFR3A-201ENST00000254624 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
EFR3A-201ENST00000254624 TCEAL9Q9UHQ7 104 aa22.05■■□□□ 1.12
EFR3A-201ENST00000254624 DDX54Q8TDD1 881 aaKnown RBP22.05■■□□□ 1.12
EFR3A-201ENST00000254624 HOOK1Q9UJC3 728 aaKnown RBP22.05■■□□□ 1.12
EFR3A-201ENST00000254624 SLC4A3P48751 1232 aa22.05■■□□□ 1.12
EFR3A-201ENST00000254624 BECN2A8MW95 431 aa22.04■■□□□ 1.12
EFR3A-201ENST00000254624 FANCIQ9NVI1 1328 aa22.04■■□□□ 1.12
EFR3A-201ENST00000254624 SAFBQ15424 915 aaKnown RBP eCLIP22.04■■□□□ 1.12
EFR3A-201ENST00000254624 GPATCH8Q9UKJ3 1502 aaKnown RBP22.04■■□□□ 1.12
EFR3A-201ENST00000254624 TPM3P06753 285 aa22.04■■□□□ 1.12
EFR3A-201ENST00000254624 CCDC27Q2M243 656 aa22.04■■□□□ 1.12
EFR3A-201ENST00000254624 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
EFR3A-201ENST00000254624 NUTM2BA6NNL0 878 aaPredicted RBP22.04■■□□□ 1.12
EFR3A-201ENST00000254624 NUTM2EB1AL46 878 aaPredicted RBP22.04■■□□□ 1.12
EFR3A-201ENST00000254624 NUTM2AQ8IVF1 878 aaPredicted RBP22.04■■□□□ 1.12
EFR3A-201ENST00000254624 IDI1Q13907 227 aa22.03■■□□□ 1.12
EFR3A-201ENST00000254624 TEX14Q8IWB6 1497 aa22.02■■□□□ 1.12
EFR3A-201ENST00000254624 TSR1Q2NL82 804 aaKnown RBP22.02■■□□□ 1.12
EFR3A-201ENST00000254624 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
EFR3A-201ENST00000254624 PLCH2O75038 1416 aa22.02■■□□□ 1.12
EFR3A-201ENST00000254624 BTBD11A6QL63 1104 aa22.01■■□□□ 1.11
EFR3A-201ENST00000254624 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
EFR3A-201ENST00000254624 GNL3LQ9NVN8 582 aaKnown RBP22.01■■□□□ 1.11
EFR3A-201ENST00000254624 SCAF11Q99590 1463 aaKnown RBP22.01■■□□□ 1.11
EFR3A-201ENST00000254624 TPM1P09493 284 aa22.01■■□□□ 1.11
EFR3A-201ENST00000254624 CCDC158Q5M9N0 1113 aa22.01■■□□□ 1.11
EFR3A-201ENST00000254624 ADGRF5Q8IZF2 1346 aa22■■□□□ 1.11
EFR3A-201ENST00000254624 WASLO00401 505 aaPredicted RBP22■■□□□ 1.11
EFR3A-201ENST00000254624 FBXO31Q5XUX0 539 aaPredicted RBP22■■□□□ 1.11
EFR3A-201ENST00000254624 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
EFR3A-201ENST00000254624 FOXD4L6Q3SYB3 417 aaPredicted RBP22■■□□□ 1.11
EFR3A-201ENST00000254624 FOXD4L3Q6VB84 417 aaPredicted RBP22■■□□□ 1.11
EFR3A-201ENST00000254624 NOC3LQ8WTT2 800 aaKnown RBP22■■□□□ 1.11
EFR3A-201ENST00000254624 CNNM1Q9NRU3 951 aa22■■□□□ 1.11
EFR3A-201ENST00000254624 PDZRN3Q9UPQ7 1066 aa21.99■■□□□ 1.11
EFR3A-201ENST00000254624 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
EFR3A-201ENST00000254624 PES1O00541 588 aaKnown RBP21.98■■□□□ 1.11
EFR3A-201ENST00000254624 TMPOP42166 694 aaKnown RBP21.98■■□□□ 1.11
EFR3A-201ENST00000254624 SART3Q15020 963 aaKnown RBP21.98■■□□□ 1.11
EFR3A-201ENST00000254624 ITSN2Q9NZM3 1697 aa21.98■■□□□ 1.11
EFR3A-201ENST00000254624 BCAR3O75815 825 aa21.98■■□□□ 1.11
EFR3A-201ENST00000254624 NOS1P29475 1434 aa21.98■■□□□ 1.11
EFR3A-201ENST00000254624 VPS37CA5D8V6 355 aaPredicted RBP21.98■■□□□ 1.11
EFR3A-201ENST00000254624 FAM177BA6PVY3 158 aa21.98■■□□□ 1.11
EFR3A-201ENST00000254624 CEP89Q96ST8 783 aa21.98■■□□□ 1.11
EFR3A-201ENST00000254624 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.98■■□□□ 1.11
EFR3A-201ENST00000254624 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
EFR3A-201ENST00000254624 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
EFR3A-201ENST00000254624 PHF8Q9UPP1 1060 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 ATP10BO94823 1461 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 DNAJC2Q99543 621 aaKnown RBP21.97■■□□□ 1.11
EFR3A-201ENST00000254624 C14orf93Q9H972 538 aaKnown RBP21.97■■□□□ 1.11
EFR3A-201ENST00000254624 TTC39AQ5SRH9 613 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
EFR3A-201ENST00000254624 NSD2O96028 1365 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 XBP1P17861 261 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
EFR3A-201ENST00000254624 BICD2Q8TD16 824 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 BRMS1Q9HCU9 246 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 SF3B2Q13435 895 aaKnown RBP21.97■■□□□ 1.11
EFR3A-201ENST00000254624 LRRCC1Q9C099 1032 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 ABCC11Q96J66 1382 aa21.97■■□□□ 1.11
EFR3A-201ENST00000254624 SLC3A2P08195 630 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms