RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CABP1Q9NZU7 370 aa24.41■■□□□ 1.5
PDLIM4-201ENST00000253754 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
PDLIM4-201ENST00000253754 NGEFQ8N5V2 710 aa24.4■■□□□ 1.5
PDLIM4-201ENST00000253754 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.5
PDLIM4-201ENST00000253754 NCKAP5LQ9HCH0 1330 aa24.39■■□□□ 1.49
PDLIM4-201ENST00000253754 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.38■■□□□ 1.49
PDLIM4-201ENST00000253754 FYB1O15117 783 aa24.37■■□□□ 1.49
PDLIM4-201ENST00000253754 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
PDLIM4-201ENST00000253754 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
PDLIM4-201ENST00000253754 TCERG1O14776 1098 aaKnown RBP24.36■■□□□ 1.49
PDLIM4-201ENST00000253754 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
PDLIM4-201ENST00000253754 HDGFL2Q7Z4V5 671 aaPredicted RBP24.35■■□□□ 1.49
PDLIM4-201ENST00000253754 NUDT16Q96DE0 195 aaKnown RBP24.34■■□□□ 1.49
PDLIM4-201ENST00000253754 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
PDLIM4-201ENST00000253754 KDM2BQ8NHM5 1336 aa24.33■■□□□ 1.49
PDLIM4-201ENST00000253754 KCNA6P17658 529 aa24.33■■□□□ 1.49
PDLIM4-201ENST00000253754 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
PDLIM4-201ENST00000253754 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
PDLIM4-201ENST00000253754 U2SURPO15042 1029 aaKnown RBP24.31■■□□□ 1.48
PDLIM4-201ENST00000253754 CCDC61Q9Y6R9 512 aa24.31■■□□□ 1.48
PDLIM4-201ENST00000253754 PIK3R4Q99570 1358 aa24.31■■□□□ 1.48
PDLIM4-201ENST00000253754 PPIP5K1Q6PFW1 1433 aa24.31■■□□□ 1.48
PDLIM4-201ENST00000253754 NUTM2FA1L443 756 aa24.3■■□□□ 1.48
PDLIM4-201ENST00000253754 PDE4AP27815 886 aa24.3■■□□□ 1.48
PDLIM4-201ENST00000253754 XRN1Q8IZH2 1706 aaKnown RBP24.29■■□□□ 1.48
PDLIM4-201ENST00000253754 COL3A1P02461 1466 aaPredicted RBP24.29■■□□□ 1.48
PDLIM4-201ENST00000253754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.28■■□□□ 1.48
PDLIM4-201ENST00000253754 PRR36Q9H6K5 1346 aa24.28■■□□□ 1.48
PDLIM4-201ENST00000253754 LMTK3Q96Q04 1460 aa24.28■■□□□ 1.48
PDLIM4-201ENST00000253754 ADGRB2O60241 1585 aa24.27■■□□□ 1.48
PDLIM4-201ENST00000253754 ATP7BP35670 1465 aa24.27■■□□□ 1.48
PDLIM4-201ENST00000253754 NPHP4O75161 1426 aaPredicted RBP24.27■■□□□ 1.48
PDLIM4-201ENST00000253754 WDR63Q8IWG1 891 aa24.27■■□□□ 1.48
PDLIM4-201ENST00000253754 FBLN1P23142 703 aa24.26■■□□□ 1.47
PDLIM4-201ENST00000253754 MS4A1P11836 297 aa24.26■■□□□ 1.47
PDLIM4-201ENST00000253754 ANP32AP39687 249 aaKnown RBP24.26■■□□□ 1.47
PDLIM4-201ENST00000253754 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
PDLIM4-201ENST00000253754 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
PDLIM4-201ENST00000253754 CENPQQ7L2Z9 268 aaPredicted RBP24.25■■□□□ 1.47
PDLIM4-201ENST00000253754 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
PDLIM4-201ENST00000253754 BACH2Q9BYV9 841 aa24.24■■□□□ 1.47
PDLIM4-201ENST00000253754 CHD2O14647 1828 aaKnown RBP24.24■■□□□ 1.47
PDLIM4-201ENST00000253754 PANK1Q8TE04 598 aa24.24■■□□□ 1.47
PDLIM4-201ENST00000253754 PLEKHF1Q96S99 279 aa24.24■■□□□ 1.47
PDLIM4-201ENST00000253754 CANXP27824 592 aaKnown RBP24.23■■□□□ 1.47
PDLIM4-201ENST00000253754 FRAT1Q92837 279 aaPredicted RBP24.23■■□□□ 1.47
PDLIM4-201ENST00000253754 PAK3O75914 559 aaPredicted RBP24.23■■□□□ 1.47
PDLIM4-201ENST00000253754 RARSP54136 660 aaKnown RBP24.23■■□□□ 1.47
PDLIM4-201ENST00000253754 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
PDLIM4-201ENST00000253754 BCL2L13Q9BXK5 485 aa24.22■■□□□ 1.47
PDLIM4-201ENST00000253754 CPSF1Q10570 1443 aaKnown RBP24.22■■□□□ 1.47
PDLIM4-201ENST00000253754 NOP58Q9Y2X3 529 aaKnown RBP24.21■■□□□ 1.47
PDLIM4-201ENST00000253754 COG6Q9Y2V7 657 aa24.2■■□□□ 1.46
PDLIM4-201ENST00000253754 IPO9Q96P70 1041 aaKnown RBP24.19■■□□□ 1.46
PDLIM4-201ENST00000253754 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
PDLIM4-201ENST00000253754 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
PDLIM4-201ENST00000253754 BCL11AQ9H165 835 aa24.19■■□□□ 1.46
PDLIM4-201ENST00000253754 TNNQ9UQP3 1299 aa24.19■■□□□ 1.46
PDLIM4-201ENST00000253754 CDC42BPGQ6DT37 1551 aa24.19■■□□□ 1.46
PDLIM4-201ENST00000253754 PDE3AQ14432 1141 aa24.18■■□□□ 1.46
PDLIM4-201ENST00000253754 TSR2Q969E8 191 aaKnown RBP24.18■■□□□ 1.46
PDLIM4-201ENST00000253754 DIAPH1O60610 1272 aaKnown RBP24.18■■□□□ 1.46
PDLIM4-201ENST00000253754 TMPOP42166 694 aaKnown RBP24.18■■□□□ 1.46
PDLIM4-201ENST00000253754 PNPLA6Q8IY17 1366 aa24.17■■□□□ 1.46
PDLIM4-201ENST00000253754 TRIM35Q9UPQ4 493 aa24.17■■□□□ 1.46
PDLIM4-201ENST00000253754 ZNF692Q9BU19 519 aaPredicted RBP24.16■■□□□ 1.46
PDLIM4-201ENST00000253754 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
PDLIM4-201ENST00000253754 MAPK8IP3Q9UPT6 1336 aa24.16■■□□□ 1.46
PDLIM4-201ENST00000253754 EDC4Q6P2E9 1401 aaKnown RBP24.16■■□□□ 1.46
PDLIM4-201ENST00000253754 ITSN1Q15811 1721 aa24.15■■□□□ 1.46
PDLIM4-201ENST00000253754 ACEP12821 1306 aa24.15■■□□□ 1.46
PDLIM4-201ENST00000253754 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
PDLIM4-201ENST00000253754 ZRANB1Q9UGI0 708 aa24.15■■□□□ 1.46
PDLIM4-201ENST00000253754 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.46
PDLIM4-201ENST00000253754 IGHDP01880 384 aa24.14■■□□□ 1.46
PDLIM4-201ENST00000253754 RLBP1P12271 317 aa24.14■■□□□ 1.45
PDLIM4-201ENST00000253754 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.45
PDLIM4-201ENST00000253754 NME9Q86XW9 330 aa24.14■■□□□ 1.45
PDLIM4-201ENST00000253754 RGPD8O14715 1765 aaPredicted RBP24.14■■□□□ 1.45
PDLIM4-201ENST00000253754 TOPAZ1Q8N9V7 1692 aa24.14■■□□□ 1.45
PDLIM4-201ENST00000253754 AKAP12Q02952 1782 aa24.13■■□□□ 1.45
PDLIM4-201ENST00000253754 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
PDLIM4-201ENST00000253754 MON2Q7Z3U7 1717 aa24.13■■□□□ 1.45
PDLIM4-201ENST00000253754 RGS3P49796 1198 aa24.12■■□□□ 1.45
PDLIM4-201ENST00000253754 CLUAP1Q96AJ1 413 aa24.12■■□□□ 1.45
PDLIM4-201ENST00000253754 EMILIN1Q9Y6C2 1016 aa24.1■■□□□ 1.45
PDLIM4-201ENST00000253754 RIPK4P57078 832 aa24.1■■□□□ 1.45
PDLIM4-201ENST00000253754 NALCNQ8IZF0 1738 aa24.09■■□□□ 1.45
PDLIM4-201ENST00000253754 EXOSC9Q06265 439 aaKnown RBP24.09■■□□□ 1.45
PDLIM4-201ENST00000253754 C14orf37Q86TY3 774 aa24.08■■□□□ 1.44
PDLIM4-201ENST00000253754 LRRC7Q96NW7 1537 aa24.07■■□□□ 1.44
PDLIM4-201ENST00000253754 NGDNQ8NEJ9 315 aaKnown RBP24.07■■□□□ 1.44
PDLIM4-201ENST00000253754 ZBTB47Q9UFB7 747 aaPredicted RBP24.07■■□□□ 1.44
PDLIM4-201ENST00000253754 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
PDLIM4-201ENST00000253754 STRCQ7RTU9 1775 aa24.06■■□□□ 1.44
PDLIM4-201ENST00000253754 FMN2Q9NZ56 1722 aa24.05■■□□□ 1.44
PDLIM4-201ENST00000253754 HMOX1P09601 288 aa24.05■■□□□ 1.44
PDLIM4-201ENST00000253754 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
PDLIM4-201ENST00000253754 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
PDLIM4-201ENST00000253754 USP6P35125 1406 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms