RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 API5Q9BZZ5 524 aaKnown RBP13.57□□□□□ -0.24
LAMA5-201ENST00000252999 PDCP20941 246 aa13.57□□□□□ -0.24
LAMA5-201ENST00000252999 RABEP1Q15276 862 aa13.57□□□□□ -0.24
LAMA5-201ENST00000252999 TNMDQ9H2S6 317 aa13.57□□□□□ -0.24
LAMA5-201ENST00000252999 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
LAMA5-201ENST00000252999 SEPT11Q9NVA2 429 aaKnown RBP13.57□□□□□ -0.24
LAMA5-201ENST00000252999 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
LAMA5-201ENST00000252999 ZNF396Q96N95 335 aaPredicted RBP13.57□□□□□ -0.24
LAMA5-201ENST00000252999 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
LAMA5-201ENST00000252999 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
LAMA5-201ENST00000252999 FSD1Q9BTV5 496 aa13.56□□□□□ -0.24
LAMA5-201ENST00000252999 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
LAMA5-201ENST00000252999 RIPK4P57078 832 aa13.56□□□□□ -0.24
LAMA5-201ENST00000252999 STIM1Q13586 685 aa13.56□□□□□ -0.24
LAMA5-201ENST00000252999 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
LAMA5-201ENST00000252999 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
LAMA5-201ENST00000252999 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
LAMA5-201ENST00000252999 PDCL3Q9H2J4 239 aa13.55□□□□□ -0.24
LAMA5-201ENST00000252999 USP47Q96K76 1375 aa13.55□□□□□ -0.24
LAMA5-201ENST00000252999 CUX2O14529 1486 aa13.54□□□□□ -0.24
LAMA5-201ENST00000252999 PRKCSHP14314 528 aaPredicted RBP13.54□□□□□ -0.24
LAMA5-201ENST00000252999 NEK4P51957 841 aa13.54□□□□□ -0.24
LAMA5-201ENST00000252999 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
LAMA5-201ENST00000252999 PIP4K2AP48426 406 aaPredicted RBP13.54□□□□□ -0.24
LAMA5-201ENST00000252999 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
LAMA5-201ENST00000252999 ME1P48163 572 aa13.54□□□□□ -0.24
LAMA5-201ENST00000252999 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
LAMA5-201ENST00000252999 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
LAMA5-201ENST00000252999 CCDC97Q96F63 343 aaPredicted RBP13.53□□□□□ -0.24
LAMA5-201ENST00000252999 CEP63Q96MT8 703 aa13.52□□□□□ -0.24
LAMA5-201ENST00000252999 TANGO6Q9C0B7 1094 aa13.52□□□□□ -0.24
LAMA5-201ENST00000252999 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.24
LAMA5-201ENST00000252999 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.24
LAMA5-201ENST00000252999 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
LAMA5-201ENST00000252999 SSR1P43307 286 aaKnown RBP13.52□□□□□ -0.25
LAMA5-201ENST00000252999 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 KIAA1328Q86T90 577 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
LAMA5-201ENST00000252999 RB1CC1Q8TDY2 1594 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 CCDC91Q7Z6B0 441 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 EVC2Q86UK5 1308 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 AIMP1Q12904 312 aaKnown RBP13.51□□□□□ -0.25
LAMA5-201ENST00000252999 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
LAMA5-201ENST00000252999 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 ABCC8Q09428 1581 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 KIF3BO15066 747 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
LAMA5-201ENST00000252999 TMCO3Q6UWJ1 677 aa13.5□□□□□ -0.25
LAMA5-201ENST00000252999 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
LAMA5-201ENST00000252999 WASHC2CQ9Y4E1 1318 aa13.5□□□□□ -0.25
LAMA5-201ENST00000252999 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
LAMA5-201ENST00000252999 CCDC113Q9H0I3 377 aa13.5□□□□□ -0.25
LAMA5-201ENST00000252999 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
LAMA5-201ENST00000252999 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
LAMA5-201ENST00000252999 STK3Q13188 491 aa13.49□□□□□ -0.25
LAMA5-201ENST00000252999 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
LAMA5-201ENST00000252999 MAP2K1Q02750 393 aaPredicted RBP13.49□□□□□ -0.25
LAMA5-201ENST00000252999 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
LAMA5-201ENST00000252999 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
LAMA5-201ENST00000252999 CRACR2AQ9BSW2 395 aa13.48□□□□□ -0.25
LAMA5-201ENST00000252999 SHTN1A0MZ66 631 aa13.48□□□□□ -0.25
LAMA5-201ENST00000252999 CBFA2T2O43439 604 aa13.48□□□□□ -0.25
LAMA5-201ENST00000252999 SLC3A2P08195 630 aaKnown RBP13.48□□□□□ -0.25
LAMA5-201ENST00000252999 SOGA1O94964 1423 aa13.48□□□□□ -0.25
LAMA5-201ENST00000252999 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
LAMA5-201ENST00000252999 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
LAMA5-201ENST00000252999 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
LAMA5-201ENST00000252999 HMOX1P09601 288 aa13.47□□□□□ -0.25
LAMA5-201ENST00000252999 UBXN4Q92575 508 aa13.47□□□□□ -0.25
LAMA5-201ENST00000252999 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
LAMA5-201ENST00000252999 ESPNB1AK53 854 aa13.46□□□□□ -0.25
LAMA5-201ENST00000252999 EPB41L2O43491 1005 aaKnown RBP13.46□□□□□ -0.25
LAMA5-201ENST00000252999 DACH1Q9UI36 760 aa13.46□□□□□ -0.25
LAMA5-201ENST00000252999 MCM2P49736 904 aa13.46□□□□□ -0.25
LAMA5-201ENST00000252999 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
LAMA5-201ENST00000252999 POLR3GO15318 223 aaPredicted RBP13.46□□□□□ -0.26
LAMA5-201ENST00000252999 TAF4BQ92750 862 aa13.46□□□□□ -0.26
LAMA5-201ENST00000252999 CBX1P83916 185 aa13.46□□□□□ -0.26
LAMA5-201ENST00000252999 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.26
LAMA5-201ENST00000252999 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
LAMA5-201ENST00000252999 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
LAMA5-201ENST00000252999 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
LAMA5-201ENST00000252999 SSBP05455 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
LAMA5-201ENST00000252999 CCDC148Q8NFR7 591 aa13.45□□□□□ -0.26
LAMA5-201ENST00000252999 C1orf115Q9H7X2 142 aa13.44□□□□□ -0.26
LAMA5-201ENST00000252999 JAKMIP3Q5VZ66 844 aa13.44□□□□□ -0.26
LAMA5-201ENST00000252999 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.262e-15■■■■■ 54.7
LAMA5-201ENST00000252999 KRT85P78386 507 aa13.44□□□□□ -0.26
LAMA5-201ENST00000252999 UBE4AQ14139 1066 aa13.44□□□□□ -0.26
LAMA5-201ENST00000252999 ZHX1Q9UKY1 873 aaPredicted RBP13.44□□□□□ -0.26
LAMA5-201ENST00000252999 CEP57L1Q8IYX8 460 aa13.44□□□□□ -0.26
LAMA5-201ENST00000252999 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
LAMA5-201ENST00000252999 NEBLO76041 1014 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
LAMA5-201ENST00000252999 TNNT1P13805 278 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms