RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 CCDC125Q86Z20 511 aa18.9■□□□□ 0.62
PMPCB-201ENST00000249269 AEBP1Q8IUX7 1158 aa18.9■□□□□ 0.62
PMPCB-201ENST00000249269 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
PMPCB-201ENST00000249269 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
PMPCB-201ENST00000249269 MYOM2P54296 1465 aa18.89■□□□□ 0.61
PMPCB-201ENST00000249269 SPTY2D1Q68D10 685 aaPredicted RBP18.89■□□□□ 0.61
PMPCB-201ENST00000249269 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
PMPCB-201ENST00000249269 TET3O43151 1660 aa18.88■□□□□ 0.61
PMPCB-201ENST00000249269 PLCH2O75038 1416 aa18.88■□□□□ 0.61
PMPCB-201ENST00000249269 MYO3AQ8NEV4 1616 aa18.87■□□□□ 0.61
PMPCB-201ENST00000249269 L1TD1Q5T7N2 865 aaKnown RBP18.87■□□□□ 0.61
PMPCB-201ENST00000249269 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
PMPCB-201ENST00000249269 SEMA3FQ13275 785 aa18.86■□□□□ 0.61
PMPCB-201ENST00000249269 ABCC1P33527 1531 aa18.86■□□□□ 0.61
PMPCB-201ENST00000249269 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
PMPCB-201ENST00000249269 RINLQ6ZS11 566 aa18.84■□□□□ 0.61
PMPCB-201ENST00000249269 CEP120Q8N960 986 aa18.84■□□□□ 0.61
PMPCB-201ENST00000249269 APBB1O00213 710 aa18.84■□□□□ 0.61
PMPCB-201ENST00000249269 MPNDQ8N594 471 aa18.84■□□□□ 0.61
PMPCB-201ENST00000249269 VWDEQ8N2E2 1590 aa18.84■□□□□ 0.61
PMPCB-201ENST00000249269 KANK1Q14678 1352 aa18.84■□□□□ 0.61
PMPCB-201ENST00000249269 TMCO4Q5TGY1 634 aa18.83■□□□□ 0.61
PMPCB-201ENST00000249269 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.83■□□□□ 0.6
PMPCB-201ENST00000249269 IRF6O14896 467 aa18.82■□□□□ 0.6
PMPCB-201ENST00000249269 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
PMPCB-201ENST00000249269 USP32Q8NFA0 1604 aa18.82■□□□□ 0.6
PMPCB-201ENST00000249269 UPF2Q9HAU5 1272 aaKnown RBP18.81■□□□□ 0.6
PMPCB-201ENST00000249269 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
PMPCB-201ENST00000249269 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
PMPCB-201ENST00000249269 TSHZ1Q6ZSZ6 1077 aa18.8■□□□□ 0.6
PMPCB-201ENST00000249269 TRIM44Q96DX7 344 aaPredicted RBP18.8■□□□□ 0.6
PMPCB-201ENST00000249269 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
PMPCB-201ENST00000249269 USP19O94966 1318 aa18.79■□□□□ 0.6
PMPCB-201ENST00000249269 MAP3K4Q9Y6R4 1608 aa18.79■□□□□ 0.6
PMPCB-201ENST00000249269 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
PMPCB-201ENST00000249269 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
PMPCB-201ENST00000249269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■□□□ 13.3
PMPCB-201ENST00000249269 ADRA2BP18089 450 aa18.78■□□□□ 0.6
PMPCB-201ENST00000249269 NLRP1Q9C000 1473 aa18.77■□□□□ 0.6
PMPCB-201ENST00000249269 CT47B1P0C2W7 299 aaPredicted RBP18.77■□□□□ 0.6
PMPCB-201ENST00000249269 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
PMPCB-201ENST00000249269 ADGRL1O94910 1474 aa18.77■□□□□ 0.59
PMPCB-201ENST00000249269 ERVK-7P63135 1459 aa18.76■□□□□ 0.59
PMPCB-201ENST00000249269 NRXN1Q9ULB1 1477 aa18.76■□□□□ 0.59
PMPCB-201ENST00000249269 APAF1O14727 1248 aa18.76■□□□□ 0.59
PMPCB-201ENST00000249269 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
PMPCB-201ENST00000249269 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
PMPCB-201ENST00000249269 ZFYVE16Q7Z3T8 1539 aa18.75■□□□□ 0.59
PMPCB-201ENST00000249269 ISY1Q9ULR0 285 aaKnown RBP18.75■□□□□ 0.59
PMPCB-201ENST00000249269 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
PMPCB-201ENST00000249269 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
PMPCB-201ENST00000249269 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
PMPCB-201ENST00000249269 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
PMPCB-201ENST00000249269 ANTXR1Q9H6X2 564 aa18.72■□□□□ 0.59
PMPCB-201ENST00000249269 IGHDP01880 384 aa18.72■□□□□ 0.59
PMPCB-201ENST00000249269 SKAP1Q86WV1 359 aa18.72■□□□□ 0.59
PMPCB-201ENST00000249269 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
PMPCB-201ENST00000249269 PDCL3Q9H2J4 239 aa18.72■□□□□ 0.59
PMPCB-201ENST00000249269 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
PMPCB-201ENST00000249269 SHPRHQ149N8 1683 aa18.71■□□□□ 0.59
PMPCB-201ENST00000249269 RUNDC1Q96C34 613 aa18.71■□□□□ 0.58
PMPCB-201ENST00000249269 ABCA6Q8N139 1617 aa18.7■□□□□ 0.58
PMPCB-201ENST00000249269 BCAR3O75815 825 aa18.7■□□□□ 0.58
PMPCB-201ENST00000249269 NSD2O96028 1365 aa18.69■□□□□ 0.58
PMPCB-201ENST00000249269 INO80Q9ULG1 1556 aaPredicted RBP18.69■□□□□ 0.58
PMPCB-201ENST00000249269 KIF1BO60333 1816 aa18.69■□□□□ 0.58
PMPCB-201ENST00000249269 LMTK2Q8IWU2 1503 aa18.68■□□□□ 0.58
PMPCB-201ENST00000249269 FANCAO15360 1455 aa18.68■□□□□ 0.58
PMPCB-201ENST00000249269 SMARCA5O60264 1052 aaPredicted RBP18.68■□□□□ 0.58
PMPCB-201ENST00000249269 ARMCX6Q7L4S7 300 aa18.68■□□□□ 0.58
PMPCB-201ENST00000249269 NME8Q8N427 588 aa18.67■□□□□ 0.58
PMPCB-201ENST00000249269 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
PMPCB-201ENST00000249269 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
PMPCB-201ENST00000249269 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
PMPCB-201ENST00000249269 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
PMPCB-201ENST00000249269 OTUD6BQ8N6M0 293 aa18.66■□□□□ 0.58
PMPCB-201ENST00000249269 TERF2IPQ9NYB0 399 aa18.66■□□□□ 0.58
PMPCB-201ENST00000249269 ZCCHC11Q5TAX3 1644 aaKnown RBP18.66■□□□□ 0.58
PMPCB-201ENST00000249269 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
PMPCB-201ENST00000249269 MYH16Q9H6N6 1097 aa18.65■□□□□ 0.58
PMPCB-201ENST00000249269 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
PMPCB-201ENST00000249269 NEUROD2Q15784 382 aa18.64■□□□□ 0.58
PMPCB-201ENST00000249269 HSP90AB3PQ58FF7 597 aa18.64■□□□□ 0.58
PMPCB-201ENST00000249269 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.58
PMPCB-201ENST00000249269 NBPF9Q3BBW0 867 aa18.64■□□□□ 0.57
PMPCB-201ENST00000249269 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
PMPCB-201ENST00000249269 MYBPC2Q14324 1141 aa18.63■□□□□ 0.57
PMPCB-201ENST00000249269 ARID4AP29374 1257 aaPredicted RBP18.63■□□□□ 0.57
PMPCB-201ENST00000249269 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
PMPCB-201ENST00000249269 ADGRB2O60241 1585 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 APBB1IPQ7Z5R6 666 aaPredicted RBP18.62■□□□□ 0.57
PMPCB-201ENST00000249269 SMAP1Q8IYB5 467 aaPredicted RBP18.62■□□□□ 0.57
PMPCB-201ENST00000249269 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 CHD1O14646 1710 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 ZNF518AQ6AHZ1 1483 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 FSD2A1L4K1 749 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 POLD1P28340 1107 aa18.62■□□□□ 0.57
PMPCB-201ENST00000249269 PPP4R3BQ5MIZ7 849 aa18.61■□□□□ 0.57
PMPCB-201ENST00000249269 CARD14Q9BXL6 1004 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms