RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ONECUT3O60422 494 aaPredicted RBP18.71■□□□□ 0.59
APOBEC3A-201ENST00000249116 BLMP54132 1417 aaPredicted RBP18.71■□□□□ 0.59
APOBEC3A-201ENST00000249116 BTG4Q9NY30 223 aa18.71■□□□□ 0.59
APOBEC3A-201ENST00000249116 ATP7BP35670 1465 aa18.7■□□□□ 0.58
APOBEC3A-201ENST00000249116 A0A0G2JS52 829 aa18.7■□□□□ 0.58
APOBEC3A-201ENST00000249116 MYT1Q01538 1121 aa18.7■□□□□ 0.58
APOBEC3A-201ENST00000249116 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
APOBEC3A-201ENST00000249116 CDK19Q9BWU1 502 aa18.7■□□□□ 0.58
APOBEC3A-201ENST00000249116 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
APOBEC3A-201ENST00000249116 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
APOBEC3A-201ENST00000249116 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
APOBEC3A-201ENST00000249116 KIAA1210Q9ULL0 1709 aa18.68■□□□□ 0.58
APOBEC3A-201ENST00000249116 PRDM11Q9NQV5 511 aa18.66■□□□□ 0.58
APOBEC3A-201ENST00000249116 BRWD3Q6RI45 1802 aa18.66■□□□□ 0.58
APOBEC3A-201ENST00000249116 CCDC61Q9Y6R9 512 aa18.66■□□□□ 0.58
APOBEC3A-201ENST00000249116 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
APOBEC3A-201ENST00000249116 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
APOBEC3A-201ENST00000249116 ACEP12821 1306 aa18.64■□□□□ 0.57
APOBEC3A-201ENST00000249116 NBPF1Q3BBV0 1214 aa18.64■□□□□ 0.57
APOBEC3A-201ENST00000249116 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
APOBEC3A-201ENST00000249116 PLEKHG3A1L390 1219 aa18.63■□□□□ 0.57
APOBEC3A-201ENST00000249116 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
APOBEC3A-201ENST00000249116 CRYBG1Q9Y4K1 1723 aa18.62■□□□□ 0.57
APOBEC3A-201ENST00000249116 SPATA31A5Q5VU36 1347 aa18.62■□□□□ 0.57
APOBEC3A-201ENST00000249116 SPATA31A7Q8IWB4 1347 aa18.62■□□□□ 0.57
APOBEC3A-201ENST00000249116 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
APOBEC3A-201ENST00000249116 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
APOBEC3A-201ENST00000249116 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
APOBEC3A-201ENST00000249116 DEFB132Q7Z7B7 95 aa18.61■□□□□ 0.57
APOBEC3A-201ENST00000249116 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
APOBEC3A-201ENST00000249116 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
APOBEC3A-201ENST00000249116 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
APOBEC3A-201ENST00000249116 BAG6P46379 1132 aa18.58■□□□□ 0.57
APOBEC3A-201ENST00000249116 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.57
APOBEC3A-201ENST00000249116 CHRNA2Q15822 529 aa18.58■□□□□ 0.57
APOBEC3A-201ENST00000249116 ABTB2Q8N961 1025 aa18.58■□□□□ 0.57
APOBEC3A-201ENST00000249116 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.56
APOBEC3A-201ENST00000249116 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
APOBEC3A-201ENST00000249116 EP400Q96L91 3159 aa18.57■□□□□ 0.56
APOBEC3A-201ENST00000249116 PPIP5K1Q6PFW1 1433 aa18.56■□□□□ 0.56
APOBEC3A-201ENST00000249116 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
APOBEC3A-201ENST00000249116 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
APOBEC3A-201ENST00000249116 L3MBTL2Q969R5 705 aa18.56■□□□□ 0.56
APOBEC3A-201ENST00000249116 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
APOBEC3A-201ENST00000249116 EVA1CP58658 441 aa18.55■□□□□ 0.56
APOBEC3A-201ENST00000249116 NLRP13Q86W25 1043 aa18.55■□□□□ 0.56
APOBEC3A-201ENST00000249116 BRD4O60885 1362 aaPredicted RBP18.54■□□□□ 0.56
APOBEC3A-201ENST00000249116 THSD7AQ9UPZ6 1657 aa18.53■□□□□ 0.56
APOBEC3A-201ENST00000249116 USP19O94966 1318 aa18.53■□□□□ 0.56
APOBEC3A-201ENST00000249116 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
APOBEC3A-201ENST00000249116 CPDO75976 1380 aa18.52■□□□□ 0.55
APOBEC3A-201ENST00000249116 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
APOBEC3A-201ENST00000249116 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
APOBEC3A-201ENST00000249116 QRICH2Q9H0J4 1663 aa18.51■□□□□ 0.55
APOBEC3A-201ENST00000249116 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
APOBEC3A-201ENST00000249116 CABP1Q9NZU7 370 aa18.5■□□□□ 0.55
APOBEC3A-201ENST00000249116 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
APOBEC3A-201ENST00000249116 EVC2Q86UK5 1308 aa18.5■□□□□ 0.55
APOBEC3A-201ENST00000249116 SSH2Q76I76 1423 aa18.5■□□□□ 0.55
APOBEC3A-201ENST00000249116 GCP02774 474 aa18.49■□□□□ 0.55
APOBEC3A-201ENST00000249116 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
APOBEC3A-201ENST00000249116 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
APOBEC3A-201ENST00000249116 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
APOBEC3A-201ENST00000249116 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
APOBEC3A-201ENST00000249116 ROCK2O75116 1388 aaKnown RBP18.48■□□□□ 0.55
APOBEC3A-201ENST00000249116 USP6P35125 1406 aa18.48■□□□□ 0.55
APOBEC3A-201ENST00000249116 EN1Q05925 392 aaPredicted RBP18.48■□□□□ 0.55
APOBEC3A-201ENST00000249116 CAMTA1Q9Y6Y1 1673 aa18.47■□□□□ 0.55
APOBEC3A-201ENST00000249116 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
APOBEC3A-201ENST00000249116 NLRP6P59044 892 aa18.47■□□□□ 0.55
APOBEC3A-201ENST00000249116 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
APOBEC3A-201ENST00000249116 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
APOBEC3A-201ENST00000249116 TCP11L2Q8N4U5 519 aa18.47■□□□□ 0.55
APOBEC3A-201ENST00000249116 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
APOBEC3A-201ENST00000249116 DISP2A7MBM2 1401 aa18.45■□□□□ 0.54
APOBEC3A-201ENST00000249116 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
APOBEC3A-201ENST00000249116 ZBTB7CA1YPR0 619 aa18.44■□□□□ 0.54
APOBEC3A-201ENST00000249116 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
APOBEC3A-201ENST00000249116 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
APOBEC3A-201ENST00000249116 TRIM37O94972 964 aa18.43■□□□□ 0.54
APOBEC3A-201ENST00000249116 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
APOBEC3A-201ENST00000249116 COL5A2P05997 1499 aaPredicted RBP18.42■□□□□ 0.54
APOBEC3A-201ENST00000249116 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
APOBEC3A-201ENST00000249116 SLIT3O75094 1523 aa18.41■□□□□ 0.54
APOBEC3A-201ENST00000249116 APBA3O96018 575 aa18.4■□□□□ 0.54
APOBEC3A-201ENST00000249116 CRB1P82279 1406 aa18.4■□□□□ 0.54
APOBEC3A-201ENST00000249116 EZH2Q15910 746 aaKnown RBP18.4■□□□□ 0.54
APOBEC3A-201ENST00000249116 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
APOBEC3A-201ENST00000249116 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
APOBEC3A-201ENST00000249116 CAMKK2Q96RR4 588 aa18.39■□□□□ 0.53
APOBEC3A-201ENST00000249116 LRP5O75197 1615 aa18.39■□□□□ 0.53
APOBEC3A-201ENST00000249116 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
APOBEC3A-201ENST00000249116 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
APOBEC3A-201ENST00000249116 TTC21AQ8NDW8 1320 aa18.38■□□□□ 0.53
APOBEC3A-201ENST00000249116 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
APOBEC3A-201ENST00000249116 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
APOBEC3A-201ENST00000249116 R3HDM1Q15032 1099 aaKnown RBP18.37■□□□□ 0.53
APOBEC3A-201ENST00000249116 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
APOBEC3A-201ENST00000249116 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
APOBEC3A-201ENST00000249116 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms