RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
PEX1-201ENST00000248633 MCM4P33991 863 aa16.59■□□□□ 0.25
PEX1-201ENST00000248633 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
PEX1-201ENST00000248633 SEC24BO95487 1268 aa16.58■□□□□ 0.25
PEX1-201ENST00000248633 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
PEX1-201ENST00000248633 CLTCL1P53675 1640 aa16.58■□□□□ 0.24
PEX1-201ENST00000248633 MRE11P49959 708 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 E9PCH4 1651 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 KIDINS220Q9ULH0 1771 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
PEX1-201ENST00000248633 PSME1Q06323 249 aa16.55■□□□□ 0.24
PEX1-201ENST00000248633 CARD14Q9BXL6 1004 aa16.55■□□□□ 0.24
PEX1-201ENST00000248633 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
PEX1-201ENST00000248633 HMOX1P09601 288 aa16.55■□□□□ 0.24
PEX1-201ENST00000248633 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
PEX1-201ENST00000248633 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
PEX1-201ENST00000248633 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
PEX1-201ENST00000248633 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
PEX1-201ENST00000248633 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
PEX1-201ENST00000248633 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
PEX1-201ENST00000248633 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
PEX1-201ENST00000248633 PKNOX2Q96KN3 472 aa16.54■□□□□ 0.24
PEX1-201ENST00000248633 DDX19BQ9UMR2 479 aa16.54■□□□□ 0.24
PEX1-201ENST00000248633 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
PEX1-201ENST00000248633 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
PEX1-201ENST00000248633 PROSER2Q86WR7 435 aaPredicted RBP16.53■□□□□ 0.24
PEX1-201ENST00000248633 KIF1BO60333 1816 aa16.53■□□□□ 0.24
PEX1-201ENST00000248633 NLRP6P59044 892 aa16.53■□□□□ 0.24
PEX1-201ENST00000248633 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
PEX1-201ENST00000248633 TNNQ9UQP3 1299 aa16.52■□□□□ 0.24
PEX1-201ENST00000248633 DIP2CQ9Y2E4 1556 aa16.52■□□□□ 0.24
PEX1-201ENST00000248633 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
PEX1-201ENST00000248633 RNF17Q9BXT8 1623 aaKnown RBP16.52■□□□□ 0.24
PEX1-201ENST00000248633 MYOM2P54296 1465 aa16.52■□□□□ 0.24
PEX1-201ENST00000248633 RIPK4P57078 832 aa16.52■□□□□ 0.23
PEX1-201ENST00000248633 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.23
PEX1-201ENST00000248633 NGEFQ8N5V2 710 aa16.52■□□□□ 0.23
PEX1-201ENST00000248633 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.23
PEX1-201ENST00000248633 ABCA6Q8N139 1617 aa16.51■□□□□ 0.23
PEX1-201ENST00000248633 CEP152O94986 1710 aa16.51■□□□□ 0.23
PEX1-201ENST00000248633 ESCO1Q5FWF5 840 aa16.51■□□□□ 0.23
PEX1-201ENST00000248633 ASXL1Q8IXJ9 1541 aa16.51■□□□□ 0.23
PEX1-201ENST00000248633 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
PEX1-201ENST00000248633 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
PEX1-201ENST00000248633 ERVK-7P63135 1459 aa16.5■□□□□ 0.23
PEX1-201ENST00000248633 NASPP49321 788 aaPredicted RBP16.5■□□□□ 0.23
PEX1-201ENST00000248633 NME9Q86XW9 330 aa16.5■□□□□ 0.23
PEX1-201ENST00000248633 ESPNB1AK53 854 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 R3HCC1Q9Y3T6 440 aaKnown RBP16.49■□□□□ 0.23
PEX1-201ENST00000248633 DIP2BQ9P265 1576 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 MPNDQ8N594 471 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 LRPPRCP42704 1394 aaKnown RBP16.49■□□□□ 0.23
PEX1-201ENST00000248633 ANKRD36BQ8N2N9 1353 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
PEX1-201ENST00000248633 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
PEX1-201ENST00000248633 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PEX1-201ENST00000248633 PPRC1Q5VV67 1664 aaKnown RBP16.48■□□□□ 0.23
PEX1-201ENST00000248633 PIK3C2GO75747 1445 aa16.48■□□□□ 0.23
PEX1-201ENST00000248633 GLI2P10070 1586 aa16.48■□□□□ 0.23
PEX1-201ENST00000248633 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
PEX1-201ENST00000248633 CAVIN1Q6NZI2 390 aaKnown RBP16.48■□□□□ 0.23
PEX1-201ENST00000248633 LMTK2Q8IWU2 1503 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
PEX1-201ENST00000248633 ATF3P18847 181 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 PTMSP20962 102 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 PCDHB15Q9Y5E8 787 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 TRPM1Q7Z4N2 1603 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 PUS7Q96PZ0 661 aaKnown RBP16.47■□□□□ 0.23
PEX1-201ENST00000248633 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
PEX1-201ENST00000248633 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
PEX1-201ENST00000248633 RRAGDQ9NQL2 400 aaPredicted RBP16.46■□□□□ 0.23
PEX1-201ENST00000248633 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
PEX1-201ENST00000248633 TMEM2Q9UHN6 1383 aa16.46■□□□□ 0.23
PEX1-201ENST00000248633 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
PEX1-201ENST00000248633 LTKP29376 864 aa16.46■□□□□ 0.23
PEX1-201ENST00000248633 FYB1O15117 783 aa16.45■□□□□ 0.22
PEX1-201ENST00000248633 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
PEX1-201ENST00000248633 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
PEX1-201ENST00000248633 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
PEX1-201ENST00000248633 FBLN1P23142 703 aa16.45■□□□□ 0.22
PEX1-201ENST00000248633 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
PEX1-201ENST00000248633 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
PEX1-201ENST00000248633 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
PEX1-201ENST00000248633 ST18O60284 1047 aa16.43■□□□□ 0.22
PEX1-201ENST00000248633 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
PEX1-201ENST00000248633 A0A0G2JS52 829 aa16.43■□□□□ 0.22
PEX1-201ENST00000248633 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
PEX1-201ENST00000248633 MAP3K4Q9Y6R4 1608 aa16.43■□□□□ 0.22
PEX1-201ENST00000248633 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
PEX1-201ENST00000248633 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
PEX1-201ENST00000248633 NSD2O96028 1365 aa16.42■□□□□ 0.22
PEX1-201ENST00000248633 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
PEX1-201ENST00000248633 TBC1D32Q96NH3 1257 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms