RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 AAMPQ13685 434 aa15.88■□□□□ 0.13
RAB3IP-201ENST00000247833 TXNDC2Q86VQ3 553 aa15.88■□□□□ 0.13
RAB3IP-201ENST00000247833 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
RAB3IP-201ENST00000247833 TBC1D2Q9BYX2 928 aa15.88■□□□□ 0.13
RAB3IP-201ENST00000247833 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
RAB3IP-201ENST00000247833 KIF16BQ96L93 1317 aa15.87■□□□□ 0.13
RAB3IP-201ENST00000247833 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 ABCA9Q8IUA7 1624 aa15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 USP19O94966 1318 aa15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 NSD2O96028 1365 aa15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 MROH2AA6NES4 1674 aa15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 NME9Q86XW9 330 aa15.86■□□□□ 0.13
RAB3IP-201ENST00000247833 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
RAB3IP-201ENST00000247833 TBC1D32Q96NH3 1257 aa15.85■□□□□ 0.13
RAB3IP-201ENST00000247833 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
RAB3IP-201ENST00000247833 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
RAB3IP-201ENST00000247833 VWDEQ8N2E2 1590 aa15.84■□□□□ 0.13
RAB3IP-201ENST00000247833 COG3Q96JB2 828 aa15.84■□□□□ 0.13
RAB3IP-201ENST00000247833 PHACTR3Q96KR7 559 aa15.84■□□□□ 0.13
RAB3IP-201ENST00000247833 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
RAB3IP-201ENST00000247833 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
RAB3IP-201ENST00000247833 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.13
RAB3IP-201ENST00000247833 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
RAB3IP-201ENST00000247833 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
RAB3IP-201ENST00000247833 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
RAB3IP-201ENST00000247833 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
RAB3IP-201ENST00000247833 FCHSD2O94868 740 aa15.82■□□□□ 0.12
RAB3IP-201ENST00000247833 QRICH2Q9H0J4 1663 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 FAM83GA6ND36 823 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 TSPYL6Q8N831 410 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 ABCC11Q96J66 1382 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 ABCC3O15438 1527 aa15.81■□□□□ 0.12
RAB3IP-201ENST00000247833 KIAA1210Q9ULL0 1709 aa15.8■□□□□ 0.12
RAB3IP-201ENST00000247833 TWISTNBQ3B726 338 aaPredicted RBP15.8■□□□□ 0.12
RAB3IP-201ENST00000247833 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
RAB3IP-201ENST00000247833 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
RAB3IP-201ENST00000247833 YTHDC2Q9H6S0 1430 aaKnown RBP15.79■□□□□ 0.12
RAB3IP-201ENST00000247833 GNAI1P63096 354 aa15.79■□□□□ 0.12
RAB3IP-201ENST00000247833 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
RAB3IP-201ENST00000247833 NRXN1Q9ULB1 1477 aa15.78■□□□□ 0.12
RAB3IP-201ENST00000247833 CHD1LQ86WJ1 897 aa15.78■□□□□ 0.12
RAB3IP-201ENST00000247833 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
RAB3IP-201ENST00000247833 GLI2P10070 1586 aa15.78■□□□□ 0.12
RAB3IP-201ENST00000247833 ZBTB40Q9NUA8 1239 aa15.77■□□□□ 0.12
RAB3IP-201ENST00000247833 ADGRB1O14514 1584 aa15.77■□□□□ 0.12
RAB3IP-201ENST00000247833 HDAC1Q13547 482 aaPredicted RBP15.76■□□□□ 0.11
RAB3IP-201ENST00000247833 CHMP4BQ9H444 224 aaKnown RBP15.76■□□□□ 0.11
RAB3IP-201ENST00000247833 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
RAB3IP-201ENST00000247833 HECW2Q9P2P5 1572 aa15.76■□□□□ 0.11
RAB3IP-201ENST00000247833 SLC4A10Q6U841 1118 aa15.76■□□□□ 0.11
RAB3IP-201ENST00000247833 NUDT16Q96DE0 195 aaKnown RBP15.76■□□□□ 0.11
RAB3IP-201ENST00000247833 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
RAB3IP-201ENST00000247833 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
RAB3IP-201ENST00000247833 RSPH6AQ9H0K4 717 aa15.75■□□□□ 0.11
RAB3IP-201ENST00000247833 MBIPQ9NS73 344 aa15.75■□□□□ 0.11
RAB3IP-201ENST00000247833 LMTK2Q8IWU2 1503 aa15.75■□□□□ 0.11
RAB3IP-201ENST00000247833 SETBP1Q9Y6X0 1596 aa15.75■□□□□ 0.11
RAB3IP-201ENST00000247833 IL16Q14005 1332 aa15.74■□□□□ 0.11
RAB3IP-201ENST00000247833 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
RAB3IP-201ENST00000247833 GOLGA6L3A6NEY3 463 aa15.74■□□□□ 0.11
RAB3IP-201ENST00000247833 SMC5Q8IY18 1101 aa15.74■□□□□ 0.11
RAB3IP-201ENST00000247833 IQSEC2Q5JU85 1478 aa15.74■□□□□ 0.11
RAB3IP-201ENST00000247833 ZBTB7CA1YPR0 619 aa15.73■□□□□ 0.11
RAB3IP-201ENST00000247833 WASLO00401 505 aaPredicted RBP15.73■□□□□ 0.11
RAB3IP-201ENST00000247833 KRT24Q2M2I5 525 aa15.73■□□□□ 0.11
RAB3IP-201ENST00000247833 ALDH1L2Q3SY69 923 aa15.73■□□□□ 0.11
RAB3IP-201ENST00000247833 L1TD1Q5T7N2 865 aaKnown RBP15.73■□□□□ 0.11
RAB3IP-201ENST00000247833 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
RAB3IP-201ENST00000247833 VAMP4O75379 141 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 MCM4P33991 863 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 MCM10Q7L590 875 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 AEBP1Q8IUX7 1158 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 MIS18AQ9NYP9 233 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 FRMPD1Q5SYB0 1578 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 NECTIN2Q92692 538 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
RAB3IP-201ENST00000247833 NUCB1Q02818 461 aa15.71■□□□□ 0.11
RAB3IP-201ENST00000247833 API5Q9BZZ5 524 aaKnown RBP15.71■□□□□ 0.11
RAB3IP-201ENST00000247833 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.11
RAB3IP-201ENST00000247833 TRAK2O60296 914 aa15.7■□□□□ 0.1
RAB3IP-201ENST00000247833 HDGFP51858 240 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-201ENST00000247833 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-201ENST00000247833 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-201ENST00000247833 LTV1Q96GA3 475 aaPredicted RBP15.69■□□□□ 0.1
RAB3IP-201ENST00000247833 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
RAB3IP-201ENST00000247833 IFT57Q9NWB7 429 aa15.69■□□□□ 0.1
RAB3IP-201ENST00000247833 PPLO60437 1756 aa15.69■□□□□ 0.1
RAB3IP-201ENST00000247833 GCC1Q96CN9 775 aa15.69■□□□□ 0.1
RAB3IP-201ENST00000247833 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
RAB3IP-201ENST00000247833 NEXMIFQ5QGS0 1516 aa15.68■□□□□ 0.1
RAB3IP-201ENST00000247833 PPIP5K1Q6PFW1 1433 aa15.68■□□□□ 0.1
RAB3IP-201ENST00000247833 ZBTB7BO15156 539 aaPredicted RBP15.67■□□□□ 0.1
RAB3IP-201ENST00000247833 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
RAB3IP-201ENST00000247833 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
RAB3IP-201ENST00000247833 CAMSAP1Q5T5Y3 1602 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms