RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 RBM27Q9P2N5 1060 aaKnown RBP12.22□□□□□ -0.45
SIX1-201ENST00000247182 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
SIX1-201ENST00000247182 SPC24Q8NBT2 197 aa12.22□□□□□ -0.45
SIX1-201ENST00000247182 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
SIX1-201ENST00000247182 NKTRP30414 1462 aaKnown RBP12.22□□□□□ -0.45
SIX1-201ENST00000247182 RAPGEF3O95398 923 aa12.21□□□□□ -0.45
SIX1-201ENST00000247182 APPP05067 770 aa12.21□□□□□ -0.45
SIX1-201ENST00000247182 CCDC66A2RUB6 948 aa12.21□□□□□ -0.46
SIX1-201ENST00000247182 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 DIAPH3Q9NSV4 1193 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 ABCC10Q5T3U5 1492 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 NUCB2P80303 420 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 ITSN2Q9NZM3 1697 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
SIX1-201ENST00000247182 ST18O60284 1047 aa12.19□□□□□ -0.46
SIX1-201ENST00000247182 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
SIX1-201ENST00000247182 BLMP54132 1417 aaPredicted RBP12.19□□□□□ -0.46
SIX1-201ENST00000247182 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
SIX1-201ENST00000247182 AEBP2Q6ZN18 517 aaPredicted RBP12.18□□□□□ -0.46
SIX1-201ENST00000247182 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
SIX1-201ENST00000247182 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
SIX1-201ENST00000247182 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
SIX1-201ENST00000247182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
SIX1-201ENST00000247182 GOLGA6L6A8MZA4 724 aa12.17□□□□□ -0.46
SIX1-201ENST00000247182 PHF14O94880 888 aa12.17□□□□□ -0.46
SIX1-201ENST00000247182 LETM1O95202 739 aaPredicted RBP12.17□□□□□ -0.46
SIX1-201ENST00000247182 TRIM27P14373 513 aa12.17□□□□□ -0.46
SIX1-201ENST00000247182 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
SIX1-201ENST00000247182 EVC2Q86UK5 1308 aa12.17□□□□□ -0.46
SIX1-201ENST00000247182 ZNF521Q96K83 1311 aa12.17□□□□□ -0.46
SIX1-201ENST00000247182 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
SIX1-201ENST00000247182 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
SIX1-201ENST00000247182 TSPY26PQ9H489 355 aa12.16□□□□□ -0.46
SIX1-201ENST00000247182 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
SIX1-201ENST00000247182 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
SIX1-201ENST00000247182 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
SIX1-201ENST00000247182 GPRASP1Q5JY77 1395 aa12.16□□□□□ -0.46
SIX1-201ENST00000247182 NOS1P29475 1434 aa12.15□□□□□ -0.46
SIX1-201ENST00000247182 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 CERS3Q8IU89 383 aa12.15□□□□□ -0.46
SIX1-201ENST00000247182 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
SIX1-201ENST00000247182 C17orf53Q8N3J3 647 aaPredicted RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
SIX1-201ENST00000247182 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
SIX1-201ENST00000247182 CABP1Q9NZU7 370 aa12.15□□□□□ -0.46
SIX1-201ENST00000247182 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 JARID2Q92833 1246 aaPredicted RBP12.14□□□□□ -0.47
SIX1-201ENST00000247182 USP25Q9UHP3 1055 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 TAF3Q5VWG9 929 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 ASXL1Q8IXJ9 1541 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 ZBTB22O15209 634 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.47
SIX1-201ENST00000247182 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 HDGFL2Q7Z4V5 671 aaPredicted RBP12.14□□□□□ -0.47
SIX1-201ENST00000247182 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
SIX1-201ENST00000247182 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
SIX1-201ENST00000247182 TAF7LQ5H9L4 462 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 PRDM4Q9UKN5 801 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 KIF20AO95235 890 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 DMTNQ08495 405 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 DDX19BQ9UMR2 479 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 NUP160Q12769 1436 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 NOL7Q9UMY1 257 aaKnown RBP12.13□□□□□ -0.47
SIX1-201ENST00000247182 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
SIX1-201ENST00000247182 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 ADGBQ8N7X0 1667 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 WAPLQ7Z5K2 1190 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 USP19O94966 1318 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
SIX1-201ENST00000247182 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
SIX1-201ENST00000247182 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
SIX1-201ENST00000247182 WDR63Q8IWG1 891 aa12.11□□□□□ -0.47
SIX1-201ENST00000247182 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
SIX1-201ENST00000247182 RRS1Q15050 365 aaKnown RBP12.11□□□□□ -0.47
SIX1-201ENST00000247182 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
SIX1-201ENST00000247182 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
SIX1-201ENST00000247182 ZNF428Q96B54 188 aa12.11□□□□□ -0.47
SIX1-201ENST00000247182 NOLC1Q14978 699 aaKnown RBP eCLIP12.1□□□□□ -0.47
SIX1-201ENST00000247182 CDC42BPAQ5VT25 1732 aa12.1□□□□□ -0.47
SIX1-201ENST00000247182 TRMT2AQ8IZ69 625 aaKnown RBP12.1□□□□□ -0.47
SIX1-201ENST00000247182 FAM83GA6ND36 823 aa12.1□□□□□ -0.47
SIX1-201ENST00000247182 FBXO31Q5XUX0 539 aaPredicted RBP12.1□□□□□ -0.47
SIX1-201ENST00000247182 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
SIX1-201ENST00000247182 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
SIX1-201ENST00000247182 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
SIX1-201ENST00000247182 TRIM34Q9BYJ4 488 aa12.09□□□□□ -0.47
SIX1-201ENST00000247182 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms