RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ACEP12821 1306 aa23.32■■□□□ 1.32
CLPP-201ENST00000245816 ATAD2Q6PL18 1390 aa23.31■■□□□ 1.32
CLPP-201ENST00000245816 PLEKHG3A1L390 1219 aa23.31■■□□□ 1.32
CLPP-201ENST00000245816 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
CLPP-201ENST00000245816 ONECUT3O60422 494 aaPredicted RBP23.3■■□□□ 1.32
CLPP-201ENST00000245816 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
CLPP-201ENST00000245816 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
CLPP-201ENST00000245816 NBPF8Q3BBV2 869 aa23.3■■□□□ 1.32
CLPP-201ENST00000245816 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
CLPP-201ENST00000245816 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
CLPP-201ENST00000245816 PAK3O75914 559 aaPredicted RBP23.28■■□□□ 1.32
CLPP-201ENST00000245816 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
CLPP-201ENST00000245816 CENPJQ9HC77 1338 aaPredicted RBP23.28■■□□□ 1.32
CLPP-201ENST00000245816 NUTM2GQ5VZR2 741 aa23.27■■□□□ 1.32
CLPP-201ENST00000245816 BTG4Q9NY30 223 aa23.27■■□□□ 1.32
CLPP-201ENST00000245816 SEPT12Q8IYM1 358 aa23.26■■□□□ 1.31
CLPP-201ENST00000245816 QRICH2Q9H0J4 1663 aa23.25■■□□□ 1.31
CLPP-201ENST00000245816 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
CLPP-201ENST00000245816 PHRF1Q9P1Y6 1649 aaKnown RBP23.24■■□□□ 1.31
CLPP-201ENST00000245816 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
CLPP-201ENST00000245816 KIAA0232Q92628 1395 aa23.22■■□□□ 1.31
CLPP-201ENST00000245816 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
CLPP-201ENST00000245816 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
CLPP-201ENST00000245816 SRPK2P78362 688 aaKnown RBP23.2■■□□□ 1.3
CLPP-201ENST00000245816 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
CLPP-201ENST00000245816 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
CLPP-201ENST00000245816 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
CLPP-201ENST00000245816 SPATA31A5Q5VU36 1347 aa23.18■■□□□ 1.3
CLPP-201ENST00000245816 SPATA31A7Q8IWB4 1347 aa23.18■■□□□ 1.3
CLPP-201ENST00000245816 FAM98CQ17RN3 349 aaKnown RBP23.18■■□□□ 1.3
CLPP-201ENST00000245816 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
CLPP-201ENST00000245816 SSH2Q76I76 1423 aa23.17■■□□□ 1.3
CLPP-201ENST00000245816 USP19O94966 1318 aa23.17■■□□□ 1.3
CLPP-201ENST00000245816 NRKQ7Z2Y5 1582 aa23.17■■□□□ 1.3
CLPP-201ENST00000245816 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
CLPP-201ENST00000245816 ROCK2O75116 1388 aaKnown RBP23.14■■□□□ 1.3
CLPP-201ENST00000245816 CAMTA1Q9Y6Y1 1673 aa23.14■■□□□ 1.29
CLPP-201ENST00000245816 DEFB132Q7Z7B7 95 aa23.14■■□□□ 1.29
CLPP-201ENST00000245816 ABTB2Q8N961 1025 aa23.14■■□□□ 1.29
CLPP-201ENST00000245816 THSD7AQ9UPZ6 1657 aa23.13■■□□□ 1.29
CLPP-201ENST00000245816 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
CLPP-201ENST00000245816 KRT27Q7Z3Y8 459 aa23.13■■□□□ 1.29
CLPP-201ENST00000245816 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
CLPP-201ENST00000245816 USP6P35125 1406 aa23.12■■□□□ 1.29
CLPP-201ENST00000245816 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
CLPP-201ENST00000245816 BLMP54132 1417 aaPredicted RBP23.11■■□□□ 1.29
CLPP-201ENST00000245816 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
CLPP-201ENST00000245816 GCP02774 474 aa23.09■■□□□ 1.29
CLPP-201ENST00000245816 CPDO75976 1380 aa23.09■■□□□ 1.29
CLPP-201ENST00000245816 STRN4Q9NRL3 753 aa23.08■■□□□ 1.29
CLPP-201ENST00000245816 PIK3C2AO00443 1686 aa23.08■■□□□ 1.29
CLPP-201ENST00000245816 EVC2Q86UK5 1308 aa23.08■■□□□ 1.28
CLPP-201ENST00000245816 LARP1Q6PKG0 1096 aaKnown RBP23.06■■□□□ 1.28
CLPP-201ENST00000245816 SLIT3O75094 1523 aa23.06■■□□□ 1.28
CLPP-201ENST00000245816 CLSPNQ9HAW4 1339 aa23.06■■□□□ 1.28
CLPP-201ENST00000245816 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
CLPP-201ENST00000245816 CPSF1Q10570 1443 aaKnown RBP23.04■■□□□ 1.28
CLPP-201ENST00000245816 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
CLPP-201ENST00000245816 COL18A1P39060 1754 aa23.03■■□□□ 1.28
CLPP-201ENST00000245816 AKAP12Q02952 1782 aa23.03■■□□□ 1.28
CLPP-201ENST00000245816 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
CLPP-201ENST00000245816 TONSLQ96HA7 1378 aa23.02■■□□□ 1.28
CLPP-201ENST00000245816 A0A0G2JS52 829 aa23.02■■□□□ 1.28
CLPP-201ENST00000245816 NLRP6P59044 892 aa23.02■■□□□ 1.28
CLPP-201ENST00000245816 MYT1Q01538 1121 aa23.02■■□□□ 1.28
CLPP-201ENST00000245816 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
CLPP-201ENST00000245816 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
CLPP-201ENST00000245816 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
CLPP-201ENST00000245816 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
CLPP-201ENST00000245816 COL5A2P05997 1499 aaPredicted RBP23■■□□□ 1.27
CLPP-201ENST00000245816 USP35Q9P2H5 1018 aa23■■□□□ 1.27
CLPP-201ENST00000245816 AXIN2Q9Y2T1 843 aa23■■□□□ 1.27
CLPP-201ENST00000245816 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
CLPP-201ENST00000245816 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
CLPP-201ENST00000245816 EVA1CP58658 441 aa22.96■■□□□ 1.27
CLPP-201ENST00000245816 TNS1Q9HBL0 1735 aaKnown RBP22.96■■□□□ 1.27
CLPP-201ENST00000245816 AATKQ6ZMQ8 1374 aa22.95■■□□□ 1.26
CLPP-201ENST00000245816 TESK2Q96S53 571 aa22.95■■□□□ 1.26
CLPP-201ENST00000245816 ZNF692Q9BU19 519 aaPredicted RBP22.95■■□□□ 1.26
CLPP-201ENST00000245816 MON2Q7Z3U7 1717 aa22.94■■□□□ 1.26
CLPP-201ENST00000245816 EN1Q05925 392 aaPredicted RBP22.94■■□□□ 1.26
CLPP-201ENST00000245816 ARHGEF25Q86VW2 580 aa22.94■■□□□ 1.26
CLPP-201ENST00000245816 ZBTB7CA1YPR0 619 aa22.93■■□□□ 1.26
CLPP-201ENST00000245816 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
CLPP-201ENST00000245816 SLC12A5Q9H2X9 1139 aa22.93■■□□□ 1.26
CLPP-201ENST00000245816 NFAT5O94916 1531 aa22.92■■□□□ 1.26
CLPP-201ENST00000245816 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
CLPP-201ENST00000245816 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
CLPP-201ENST00000245816 RGPD1P0DJD0 1748 aa22.91■■□□□ 1.26
CLPP-201ENST00000245816 TTC21AQ8NDW8 1320 aa22.9■■□□□ 1.26
CLPP-201ENST00000245816 SF3B2Q13435 895 aaKnown RBP22.9■■□□□ 1.26
CLPP-201ENST00000245816 CRB1P82279 1406 aa22.9■■□□□ 1.26
CLPP-201ENST00000245816 SOX12O15370 315 aa22.89■■□□□ 1.25
CLPP-201ENST00000245816 TRIM37O94972 964 aa22.89■■□□□ 1.25
CLPP-201ENST00000245816 NME9Q86XW9 330 aa22.89■■□□□ 1.25
CLPP-201ENST00000245816 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
CLPP-201ENST00000245816 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
CLPP-201ENST00000245816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.88■■□□□ 1.25
CLPP-201ENST00000245816 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
CLPP-201ENST00000245816 USP31Q70CQ4 1352 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms