RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 AFAP1Q8N556 730 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 MAP7D2Q96T17 732 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 ZBTB40Q9NUA8 1239 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 UQCRHLA0A096LP55 91 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 UQCRHP07919 91 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 TBC1D9Q6ZT07 1266 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 PRPF40AO75400 957 aaKnown RBP11.39□□□□□ -0.59
SRSF6-201ENST00000244020 CD2BP2O95400 341 aaKnown RBP11.39□□□□□ -0.59
SRSF6-201ENST00000244020 FOXD4L5Q5VV16 416 aaPredicted RBP11.39□□□□□ -0.59
SRSF6-201ENST00000244020 DRC7Q8IY82 874 aa11.39□□□□□ -0.59
SRSF6-201ENST00000244020 FOXD4L4Q8WXT5 416 aaPredicted RBP11.39□□□□□ -0.59
SRSF6-201ENST00000244020 PPP1R9BQ96SB3 815 aa11.39□□□□□ -0.59
SRSF6-201ENST00000244020 TMPOP42166 694 aaKnown RBP11.39□□□□□ -0.59
SRSF6-201ENST00000244020 TMEM132EQ6IEE7 984 aa11.39□□□□□ -0.59
SRSF6-201ENST00000244020 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
SRSF6-201ENST00000244020 DUOX2Q9NRD8 1548 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 KDM5AP29375 1690 aaKnown RBP11.38□□□□□ -0.59
SRSF6-201ENST00000244020 PLXNC1O60486 1568 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 CDC45O75419 566 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 ABCA8O94911 1581 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 GCC1Q96CN9 775 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 ATP10AO60312 1499 aa11.38□□□□□ -0.59
SRSF6-201ENST00000244020 APBB1O00213 710 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 DDIT3P35638 169 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 ZSCAN23Q3MJ62 389 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
SRSF6-201ENST00000244020 RNF214Q8ND24 703 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 RTEL1-TNFRSF6BF6WH68 1400 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 ERVK-7P63135 1459 aa11.37□□□□□ -0.59
SRSF6-201ENST00000244020 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
SRSF6-201ENST00000244020 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
SRSF6-201ENST00000244020 UNC13BO14795 1591 aa11.36□□□□□ -0.59
SRSF6-201ENST00000244020 ST18O60284 1047 aa11.36□□□□□ -0.59
SRSF6-201ENST00000244020 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
SRSF6-201ENST00000244020 SRPK2P78362 688 aaKnown RBP11.36□□□□□ -0.59
SRSF6-201ENST00000244020 RABEP1Q15276 862 aa11.36□□□□□ -0.59
SRSF6-201ENST00000244020 IQGAP3Q86VI3 1631 aa11.36□□□□□ -0.59
SRSF6-201ENST00000244020 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
SRSF6-201ENST00000244020 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
SRSF6-201ENST00000244020 MADDQ8WXG6 1647 aa11.35□□□□□ -0.59
SRSF6-201ENST00000244020 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
SRSF6-201ENST00000244020 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
SRSF6-201ENST00000244020 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
SRSF6-201ENST00000244020 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
SRSF6-201ENST00000244020 CCDC39Q9UFE4 941 aa11.34□□□□□ -0.59
SRSF6-201ENST00000244020 NOL7Q9UMY1 257 aaKnown RBP11.34□□□□□ -0.59
SRSF6-201ENST00000244020 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
SRSF6-201ENST00000244020 RNF17Q9BXT8 1623 aaKnown RBP11.34□□□□□ -0.59
SRSF6-201ENST00000244020 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
SRSF6-201ENST00000244020 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
SRSF6-201ENST00000244020 SYCE3A1L190 88 aa11.34□□□□□ -0.59
SRSF6-201ENST00000244020 MTERF4Q7Z6M4 381 aaKnown RBP11.34□□□□□ -0.59
SRSF6-201ENST00000244020 KIF2CQ99661 725 aa11.34□□□□□ -0.59
SRSF6-201ENST00000244020 HS1BP3Q53T59 392 aa11.33□□□□□ -0.6
SRSF6-201ENST00000244020 ZNF445P59923 1031 aa11.33□□□□□ -0.6
SRSF6-201ENST00000244020 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
SRSF6-201ENST00000244020 DIAPH1O60610 1272 aaKnown RBP11.33□□□□□ -0.6
SRSF6-201ENST00000244020 TERF1P54274 439 aa11.33□□□□□ -0.6
SRSF6-201ENST00000244020 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 FOXD4L6Q3SYB3 417 aaPredicted RBP11.32□□□□□ -0.6
SRSF6-201ENST00000244020 FOXD4L3Q6VB84 417 aaPredicted RBP11.32□□□□□ -0.6
SRSF6-201ENST00000244020 STK26Q9P289 416 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 PTPRTO14522 1441 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 PREX2Q70Z35 1606 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 INTS3Q68E01 1043 aaKnown RBP11.32□□□□□ -0.6
SRSF6-201ENST00000244020 CWC22Q9HCG8 908 aaKnown RBP11.32□□□□□ -0.6
SRSF6-201ENST00000244020 PRDM10Q9NQV6 1147 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 ZKSCAN5Q9Y2L8 839 aa11.32□□□□□ -0.6
SRSF6-201ENST00000244020 MPNDQ8N594 471 aa11.31□□□□□ -0.6
SRSF6-201ENST00000244020 ABCC11Q96J66 1382 aa11.31□□□□□ -0.6
SRSF6-201ENST00000244020 ALDH1L2Q3SY69 923 aa11.31□□□□□ -0.6
SRSF6-201ENST00000244020 LMBRD1Q9NUN5 540 aa11.31□□□□□ -0.6
SRSF6-201ENST00000244020 PKP1Q13835 747 aa11.31□□□□□ -0.6
SRSF6-201ENST00000244020 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
SRSF6-201ENST00000244020 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
SRSF6-201ENST00000244020 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
SRSF6-201ENST00000244020 ZNF518AQ6AHZ1 1483 aa11.3□□□□□ -0.6
SRSF6-201ENST00000244020 IBTKQ9P2D0 1353 aaPredicted RBP11.3□□□□□ -0.6
SRSF6-201ENST00000244020 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
SRSF6-201ENST00000244020 ZNF500O60304 480 aaPredicted RBP11.3□□□□□ -0.6
SRSF6-201ENST00000244020 TRAPPC8Q9Y2L5 1435 aa11.29□□□□□ -0.6
SRSF6-201ENST00000244020 ZGPATQ8N5A5 531 aaKnown RBP11.29□□□□□ -0.6
SRSF6-201ENST00000244020 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
SRSF6-201ENST00000244020 AEBP1Q8IUX7 1158 aa11.29□□□□□ -0.6
SRSF6-201ENST00000244020 IL16Q14005 1332 aa11.29□□□□□ -0.6
SRSF6-201ENST00000244020 MYOM1P52179 1685 aa11.29□□□□□ -0.6
SRSF6-201ENST00000244020 MCM5P33992 734 aa11.28□□□□□ -0.6
SRSF6-201ENST00000244020 THUMPD2Q9BTF0 503 aaKnown RBP11.28□□□□□ -0.6
SRSF6-201ENST00000244020 REC8O95072 547 aa11.28□□□□□ -0.6
SRSF6-201ENST00000244020 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
SRSF6-201ENST00000244020 LRSAM1Q6UWE0 723 aa11.28□□□□□ -0.6
SRSF6-201ENST00000244020 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
SRSF6-201ENST00000244020 PRKAR2BP31323 418 aa11.28□□□□□ -0.6
SRSF6-201ENST00000244020 HMOX1P09601 288 aa11.28□□□□□ -0.6
SRSF6-201ENST00000244020 TERF2IPQ9NYB0 399 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms