RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 MIER1Q8N108 512 aa5.09□□□□□ -1.59
UFM1-201ENST00000239878 USP32Q8NFA0 1604 aa5.09□□□□□ -1.6
UFM1-201ENST00000239878 CDK11BP21127 795 aaKnown RBP5.08□□□□□ -1.6
UFM1-201ENST00000239878 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
UFM1-201ENST00000239878 FMN2Q9NZ56 1722 aa5.08□□□□□ -1.6
UFM1-201ENST00000239878 TESPA1A2RU30 521 aaPredicted RBP5.08□□□□□ -1.6
UFM1-201ENST00000239878 STAC3Q96MF2 364 aa5.08□□□□□ -1.6
UFM1-201ENST00000239878 DCCP43146 1447 aa5.08□□□□□ -1.6
UFM1-201ENST00000239878 FAM135BQ49AJ0 1406 aa5.08□□□□□ -1.6
UFM1-201ENST00000239878 METP08581 1390 aa5.08□□□□□ -1.6
UFM1-201ENST00000239878 PDE4CQ08493 712 aa5.08□□□□□ -1.6
UFM1-201ENST00000239878 NCKAP5LQ9HCH0 1330 aa5.07□□□□□ -1.6
UFM1-201ENST00000239878 A0A0U1RQG5 324 aaPredicted RBP5.07□□□□□ -1.6
UFM1-201ENST00000239878 FOXD4L5Q5VV16 416 aaPredicted RBP5.07□□□□□ -1.6
UFM1-201ENST00000239878 FOXD4L4Q8WXT5 416 aaPredicted RBP5.07□□□□□ -1.6
UFM1-201ENST00000239878 ESF1Q9H501 851 aaKnown RBP5.07□□□□□ -1.6
UFM1-201ENST00000239878 USP54Q70EL1 1684 aa5.07□□□□□ -1.6
UFM1-201ENST00000239878 HSPA2P54652 639 aa5.07□□□□□ -1.6
UFM1-201ENST00000239878 TBX22Q9Y458 520 aa5.07□□□□□ -1.6
UFM1-201ENST00000239878 NHSL1Q5SYE7 1610 aa5.06□□□□□ -1.6
UFM1-201ENST00000239878 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.06□□□□□ -1.6
UFM1-201ENST00000239878 LRPPRCP42704 1394 aaKnown RBP5.06□□□□□ -1.6
UFM1-201ENST00000239878 ADGRF5Q8IZF2 1346 aa5.06□□□□□ -1.6
UFM1-201ENST00000239878 CD44P16070 742 aaKnown RBP5.06□□□□□ -1.6
UFM1-201ENST00000239878 ABCC11Q96J66 1382 aa5.06□□□□□ -1.6
UFM1-201ENST00000239878 NEFLP07196 543 aa5.06□□□□□ -1.6
UFM1-201ENST00000239878 BARGINQ6ZT62 677 aa5.06□□□□□ -1.6
UFM1-201ENST00000239878 SIRT1Q96EB6 747 aa5.06□□□□□ -1.6
UFM1-201ENST00000239878 AHDC1Q5TGY3 1603 aaPredicted RBP5.05□□□□□ -1.6
UFM1-201ENST00000239878 QRICH2Q9H0J4 1663 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 CRYBG1Q9Y4K1 1723 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 ANKLE2Q86XL3 938 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 BCL11BQ9C0K0 894 aaPredicted RBP5.05□□□□□ -1.6
UFM1-201ENST00000239878 C14orf93Q9H972 538 aaKnown RBP5.05□□□□□ -1.6
UFM1-201ENST00000239878 CLEC11AQ9Y240 323 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 NRKQ7Z2Y5 1582 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 YTHDC2Q9H6S0 1430 aaKnown RBP5.05□□□□□ -1.6
UFM1-201ENST00000239878 HMGB1P09429 215 aaKnown RBP5.05□□□□□ -1.6
UFM1-201ENST00000239878 FGD1P98174 961 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 TRIM52Q96A61 297 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 KDM4CQ9H3R0 1056 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 MST1RQ04912 1400 aa5.05□□□□□ -1.6
UFM1-201ENST00000239878 ROBO2Q9HCK4 1378 aa5.04□□□□□ -1.6
UFM1-201ENST00000239878 POTEB2H3BUK9 544 aa5.04□□□□□ -1.6
UFM1-201ENST00000239878 TULP4Q9NRJ4 1543 aa5.04□□□□□ -1.6
UFM1-201ENST00000239878 ADGRL3Q9HAR2 1447 aa5.04□□□□□ -1.6
UFM1-201ENST00000239878 SBNO2Q9Y2G9 1366 aa5.04□□□□□ -1.6
UFM1-201ENST00000239878 TRPM3Q9HCF6 1732 aaPredicted RBP5.04□□□□□ -1.6
UFM1-201ENST00000239878 CIZ1Q9ULV3 898 aaPredicted RBP5.04□□□□□ -1.6
UFM1-201ENST00000239878 MYOM1P52179 1685 aa5.04□□□□□ -1.6
UFM1-201ENST00000239878 COL22A1Q8NFW1 1626 aaPredicted RBP5.04□□□□□ -1.6
UFM1-201ENST00000239878 MFAP1P55081 439 aaKnown RBP5.03□□□□□ -1.6
UFM1-201ENST00000239878 KIF1AQ12756 1690 aa5.03□□□□□ -1.6
UFM1-201ENST00000239878 MARF1Q9Y4F3 1742 aaKnown RBP5.03□□□□□ -1.6
UFM1-201ENST00000239878 SEMA3EO15041 775 aa5.03□□□□□ -1.6
UFM1-201ENST00000239878 TRAK2O60296 914 aa5.03□□□□□ -1.6
UFM1-201ENST00000239878 KCNA6P17658 529 aa5.03□□□□□ -1.6
UFM1-201ENST00000239878 COL16A1Q07092 1604 aaPredicted RBP5.03□□□□□ -1.6
UFM1-201ENST00000239878 A6NJR5 290 aa5.03□□□□□ -1.6
UFM1-201ENST00000239878 TXNDC2Q86VQ3 553 aa5.03□□□□□ -1.6
UFM1-201ENST00000239878 ZNF335Q9H4Z2 1342 aaPredicted RBP5.03□□□□□ -1.6
UFM1-201ENST00000239878 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
UFM1-201ENST00000239878 VGFO15240 615 aaPredicted RBP5.02□□□□□ -1.61
UFM1-201ENST00000239878 RBM25P49756 843 aaKnown RBP5.02□□□□□ -1.61
UFM1-201ENST00000239878 AAMPQ13685 434 aa5.02□□□□□ -1.61
UFM1-201ENST00000239878 MAMSTRQ6ZN01 415 aa5.02□□□□□ -1.61
UFM1-201ENST00000239878 ZNF579Q8NAF0 562 aaKnown RBP5.02□□□□□ -1.61
UFM1-201ENST00000239878 ITSN1Q15811 1721 aa5.02□□□□□ -1.61
UFM1-201ENST00000239878 ABCA3Q99758 1704 aa5.02□□□□□ -1.61
UFM1-201ENST00000239878 MED1Q15648 1581 aaPredicted RBP5.02□□□□□ -1.61
UFM1-201ENST00000239878 ROBO1Q9Y6N7 1651 aa5.02□□□□□ -1.61
UFM1-201ENST00000239878 AKAP12Q02952 1782 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 ZNF316A6NFI3 1004 aaPredicted RBP5.01□□□□□ -1.61
UFM1-201ENST00000239878 IRF5Q13568 498 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 ARHGEF1Q92888 912 aaKnown RBP5.01□□□□□ -1.61
UFM1-201ENST00000239878 SHPRHQ149N8 1683 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 ALS2Q96Q42 1657 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 ATP7BP35670 1465 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 RBM10P98175 930 aaKnown RBP5.01□□□□□ -1.61
UFM1-201ENST00000239878 NBPF8Q3BBV2 869 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 CCER1Q8TC90 406 aaPredicted RBP5.01□□□□□ -1.61
UFM1-201ENST00000239878 L3MBTL2Q969R5 705 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 STAG3Q9UJ98 1225 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 EID1Q9Y6B2 187 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 ANKARQ7Z5J8 1434 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 CHADLQ6NUI6 762 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 SIN3AQ96ST3 1273 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 MON2Q7Z3U7 1717 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 PLEKHH1Q9ULM0 1364 aa5.01□□□□□ -1.61
UFM1-201ENST00000239878 PLEKHG3A1L390 1219 aa5□□□□□ -1.61
UFM1-201ENST00000239878 RIOK3O14730 519 aaKnown RBP5□□□□□ -1.61
UFM1-201ENST00000239878 HDGFP51858 240 aaKnown RBP5□□□□□ -1.61
UFM1-201ENST00000239878 PXDNQ92626 1479 aa5□□□□□ -1.61
UFM1-201ENST00000239878 TMCO4Q5TGY1 634 aa5□□□□□ -1.61
UFM1-201ENST00000239878 FANCIQ9NVI1 1328 aa5□□□□□ -1.61
UFM1-201ENST00000239878 TMEM94Q12767 1356 aa5□□□□□ -1.61
UFM1-201ENST00000239878 CLUAP1Q96AJ1 413 aa4.99□□□□□ -1.61
UFM1-201ENST00000239878 CD163L1Q9NR16 1453 aa4.99□□□□□ -1.61
UFM1-201ENST00000239878 AK7Q96M32 723 aa4.99□□□□□ -1.61
UFM1-201ENST00000239878 ZNF692Q9BU19 519 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms