RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
CTSD-201ENST00000236671 TULP4Q9NRJ4 1543 aa19.99■□□□□ 0.79
CTSD-201ENST00000236671 MAPK8IP3Q9UPT6 1336 aa19.99■□□□□ 0.79
CTSD-201ENST00000236671 USP19O94966 1318 aa19.98■□□□□ 0.79
CTSD-201ENST00000236671 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
CTSD-201ENST00000236671 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
CTSD-201ENST00000236671 WDR63Q8IWG1 891 aa19.98■□□□□ 0.79
CTSD-201ENST00000236671 ARHGEF28Q8N1W1 1705 aaKnown RBP19.98■□□□□ 0.79
CTSD-201ENST00000236671 MTHFSP49914 203 aa19.97■□□□□ 0.79
CTSD-201ENST00000236671 CCDC27Q2M243 656 aa19.97■□□□□ 0.79
CTSD-201ENST00000236671 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
CTSD-201ENST00000236671 SETD1AO15047 1707 aaKnown RBP19.97■□□□□ 0.79
CTSD-201ENST00000236671 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
CTSD-201ENST00000236671 MED14O60244 1454 aa19.97■□□□□ 0.79
CTSD-201ENST00000236671 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
CTSD-201ENST00000236671 PUS7Q96PZ0 661 aaKnown RBP19.96■□□□□ 0.79
CTSD-201ENST00000236671 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
CTSD-201ENST00000236671 NSD2O96028 1365 aa19.95■□□□□ 0.78
CTSD-201ENST00000236671 METP08581 1390 aa19.95■□□□□ 0.78
CTSD-201ENST00000236671 ANKRD36BQ8N2N9 1353 aa19.95■□□□□ 0.78
CTSD-201ENST00000236671 RBM33Q96EV2 1170 aaKnown RBP19.95■□□□□ 0.78
CTSD-201ENST00000236671 ALKQ9UM73 1620 aa19.95■□□□□ 0.78
CTSD-201ENST00000236671 AAMPQ13685 434 aa19.94■□□□□ 0.78
CTSD-201ENST00000236671 CFAP53Q96M91 514 aa19.94■□□□□ 0.78
CTSD-201ENST00000236671 ADGRB2O60241 1585 aa19.94■□□□□ 0.78
CTSD-201ENST00000236671 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
CTSD-201ENST00000236671 RLBP1P12271 317 aa19.93■□□□□ 0.78
CTSD-201ENST00000236671 GSE1Q14687 1217 aa19.93■□□□□ 0.78
CTSD-201ENST00000236671 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
CTSD-201ENST00000236671 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
CTSD-201ENST00000236671 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
CTSD-201ENST00000236671 EVC2Q86UK5 1308 aa19.92■□□□□ 0.78
CTSD-201ENST00000236671 IL27Q8NEV9 243 aa19.92■□□□□ 0.78
CTSD-201ENST00000236671 PMFBP1Q8TBY8 1022 aa19.91■□□□□ 0.78
CTSD-201ENST00000236671 PCDHB15Q9Y5E8 787 aa19.91■□□□□ 0.78
CTSD-201ENST00000236671 SEC24BO95487 1268 aa19.91■□□□□ 0.78
CTSD-201ENST00000236671 PTPRUQ92729 1446 aa19.9■□□□□ 0.78
CTSD-201ENST00000236671 BCL2L13Q9BXK5 485 aa19.9■□□□□ 0.78
CTSD-201ENST00000236671 STK26Q9P289 416 aa19.9■□□□□ 0.78
CTSD-201ENST00000236671 MYH16Q9H6N6 1097 aa19.89■□□□□ 0.77
CTSD-201ENST00000236671 CHD2O14647 1828 aaKnown RBP19.87■□□□□ 0.77
CTSD-201ENST00000236671 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
CTSD-201ENST00000236671 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
CTSD-201ENST00000236671 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
CTSD-201ENST00000236671 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
CTSD-201ENST00000236671 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
CTSD-201ENST00000236671 KCNA6P17658 529 aa19.85■□□□□ 0.77
CTSD-201ENST00000236671 A0A1W2PP64 1363 aa19.85■□□□□ 0.77
CTSD-201ENST00000236671 COL3A1P02461 1466 aaPredicted RBP19.84■□□□□ 0.77
CTSD-201ENST00000236671 PDZRN3Q9UPQ7 1066 aa19.84■□□□□ 0.77
CTSD-201ENST00000236671 TBX22Q9Y458 520 aa19.84■□□□□ 0.77
CTSD-201ENST00000236671 MVPQ14764 893 aaKnown RBP19.83■□□□□ 0.77
CTSD-201ENST00000236671 AMOTL2Q9Y2J4 779 aa19.82■□□□□ 0.76
CTSD-201ENST00000236671 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
CTSD-201ENST00000236671 RWDD1Q9H446 243 aaPredicted RBP19.82■□□□□ 0.76
CTSD-201ENST00000236671 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
CTSD-201ENST00000236671 DIP2AQ14689 1571 aa19.81■□□□□ 0.76
CTSD-201ENST00000236671 ZKSCAN2Q63HK3 967 aa19.81■□□□□ 0.76
CTSD-201ENST00000236671 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
CTSD-201ENST00000236671 BECN1Q14457 450 aa19.8■□□□□ 0.76
CTSD-201ENST00000236671 WAPLQ7Z5K2 1190 aa19.79■□□□□ 0.76
CTSD-201ENST00000236671 ANKRD26Q9UPS8 1709 aa19.79■□□□□ 0.76
CTSD-201ENST00000236671 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
CTSD-201ENST00000236671 TSR2Q969E8 191 aaKnown RBP19.79■□□□□ 0.76
CTSD-201ENST00000236671 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
CTSD-201ENST00000236671 ROBO2Q9HCK4 1378 aa19.78■□□□□ 0.76
CTSD-201ENST00000236671 DZIP1LQ8IYY4 767 aaKnown RBP19.78■□□□□ 0.76
CTSD-201ENST00000236671 TBC1D32Q96NH3 1257 aa19.78■□□□□ 0.76
CTSD-201ENST00000236671 XIRP1Q702N8 1843 aaKnown RBP19.78■□□□□ 0.76
CTSD-201ENST00000236671 BRPF3Q9ULD4 1205 aa19.78■□□□□ 0.76
CTSD-201ENST00000236671 CD163L1Q9NR16 1453 aa19.77■□□□□ 0.76
CTSD-201ENST00000236671 GGNBP2Q9H3C7 697 aa19.77■□□□□ 0.76
CTSD-201ENST00000236671 TRIM35Q9UPQ4 493 aa19.77■□□□□ 0.76
CTSD-201ENST00000236671 LTBP4Q8N2S1 1624 aa19.77■□□□□ 0.76
CTSD-201ENST00000236671 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
CTSD-201ENST00000236671 FTSJ3Q8IY81 847 aaKnown RBP19.76■□□□□ 0.75
CTSD-201ENST00000236671 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
CTSD-201ENST00000236671 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
CTSD-201ENST00000236671 RTN4Q9NQC3 1192 aaKnown RBP19.76■□□□□ 0.75
CTSD-201ENST00000236671 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
CTSD-201ENST00000236671 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
CTSD-201ENST00000236671 SMC4Q9NTJ3 1288 aa19.75■□□□□ 0.75
CTSD-201ENST00000236671 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
CTSD-201ENST00000236671 NWD1Q149M9 1564 aa19.75■□□□□ 0.75
CTSD-201ENST00000236671 TRIM27P14373 513 aa19.74■□□□□ 0.75
CTSD-201ENST00000236671 IL16Q14005 1332 aa19.73■□□□□ 0.75
CTSD-201ENST00000236671 ANTXR1Q9H6X2 564 aa19.73■□□□□ 0.75
CTSD-201ENST00000236671 FYB1O15117 783 aa19.73■□□□□ 0.75
CTSD-201ENST00000236671 SSH1Q8WYL5 1049 aa19.73■□□□□ 0.75
CTSD-201ENST00000236671 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
CTSD-201ENST00000236671 PROSER2Q86WR7 435 aaPredicted RBP19.72■□□□□ 0.75
CTSD-201ENST00000236671 TERF2IPQ9NYB0 399 aa19.72■□□□□ 0.75
CTSD-201ENST00000236671 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
CTSD-201ENST00000236671 HDAC1Q13547 482 aaPredicted RBP19.71■□□□□ 0.75
CTSD-201ENST00000236671 SLKQ9H2G2 1235 aaPredicted RBP19.71■□□□□ 0.75
CTSD-201ENST00000236671 TMEM94Q12767 1356 aa19.71■□□□□ 0.75
CTSD-201ENST00000236671 MINK1Q8N4C8 1332 aaPredicted RBP19.71■□□□□ 0.75
CTSD-201ENST00000236671 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
CTSD-201ENST00000236671 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
CTSD-201ENST00000236671 KNDC1Q76NI1 1749 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms