RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 FBLN1P23142 703 aa13.64□□□□□ -0.23
PRAMEF4-201ENST00000235349 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
PRAMEF4-201ENST00000235349 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
PRAMEF4-201ENST00000235349 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
PRAMEF4-201ENST00000235349 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
PRAMEF4-201ENST00000235349 TTC21BQ7Z4L5 1316 aa13.63□□□□□ -0.23
PRAMEF4-201ENST00000235349 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
PRAMEF4-201ENST00000235349 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
PRAMEF4-201ENST00000235349 NSD2O96028 1365 aa13.62□□□□□ -0.23
PRAMEF4-201ENST00000235349 ANKRD26Q9UPS8 1709 aa13.62□□□□□ -0.23
PRAMEF4-201ENST00000235349 LRRC7Q96NW7 1537 aa13.61□□□□□ -0.23
PRAMEF4-201ENST00000235349 USP6P35125 1406 aa13.61□□□□□ -0.23
PRAMEF4-201ENST00000235349 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
PRAMEF4-201ENST00000235349 ATF3P18847 181 aa13.6□□□□□ -0.23
PRAMEF4-201ENST00000235349 MTHFSP49914 203 aa13.6□□□□□ -0.23
PRAMEF4-201ENST00000235349 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
PRAMEF4-201ENST00000235349 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
PRAMEF4-201ENST00000235349 NCOA3Q9Y6Q9 1424 aa13.59□□□□□ -0.23
PRAMEF4-201ENST00000235349 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
PRAMEF4-201ENST00000235349 NEFLP07196 543 aa13.58□□□□□ -0.24
PRAMEF4-201ENST00000235349 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
PRAMEF4-201ENST00000235349 FOXO3O43524 673 aa13.57□□□□□ -0.24
PRAMEF4-201ENST00000235349 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRAMEF4-201ENST00000235349 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
PRAMEF4-201ENST00000235349 COG3Q96JB2 828 aa13.57□□□□□ -0.24
PRAMEF4-201ENST00000235349 MST1RQ04912 1400 aa13.56□□□□□ -0.24
PRAMEF4-201ENST00000235349 PSME1Q06323 249 aa13.56□□□□□ -0.24
PRAMEF4-201ENST00000235349 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
PRAMEF4-201ENST00000235349 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
PRAMEF4-201ENST00000235349 MSH6P52701 1360 aa13.56□□□□□ -0.24
PRAMEF4-201ENST00000235349 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
PRAMEF4-201ENST00000235349 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
PRAMEF4-201ENST00000235349 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
PRAMEF4-201ENST00000235349 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
PRAMEF4-201ENST00000235349 DCCP43146 1447 aa13.54□□□□□ -0.24
PRAMEF4-201ENST00000235349 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
PRAMEF4-201ENST00000235349 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
PRAMEF4-201ENST00000235349 NLRP6P59044 892 aa13.53□□□□□ -0.24
PRAMEF4-201ENST00000235349 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
PRAMEF4-201ENST00000235349 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
PRAMEF4-201ENST00000235349 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
PRAMEF4-201ENST00000235349 EMILIN1Q9Y6C2 1016 aa13.53□□□□□ -0.24
PRAMEF4-201ENST00000235349 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
PRAMEF4-201ENST00000235349 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
PRAMEF4-201ENST00000235349 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
PRAMEF4-201ENST00000235349 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
PRAMEF4-201ENST00000235349 SOX12O15370 315 aa13.52□□□□□ -0.25
PRAMEF4-201ENST00000235349 WDR43Q15061 677 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRAMEF4-201ENST00000235349 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
PRAMEF4-201ENST00000235349 SLAIN2Q9P270 581 aa13.51□□□□□ -0.25
PRAMEF4-201ENST00000235349 SHPRHQ149N8 1683 aa13.51□□□□□ -0.25
PRAMEF4-201ENST00000235349 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
PRAMEF4-201ENST00000235349 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
PRAMEF4-201ENST00000235349 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
PRAMEF4-201ENST00000235349 LTBP4Q8N2S1 1624 aa13.5□□□□□ -0.25
PRAMEF4-201ENST00000235349 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
PRAMEF4-201ENST00000235349 FKBP8Q14318 412 aa13.49□□□□□ -0.25
PRAMEF4-201ENST00000235349 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
PRAMEF4-201ENST00000235349 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
PRAMEF4-201ENST00000235349 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 TRPM3Q9HCF6 1732 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
PRAMEF4-201ENST00000235349 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.26
PRAMEF4-201ENST00000235349 PEAK1Q9H792 1746 aa13.46□□□□□ -0.26
PRAMEF4-201ENST00000235349 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.26
PRAMEF4-201ENST00000235349 INSRP06213 1382 aa13.46□□□□□ -0.26
PRAMEF4-201ENST00000235349 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
PRAMEF4-201ENST00000235349 U2SURPO15042 1029 aaKnown RBP13.45□□□□□ -0.26
PRAMEF4-201ENST00000235349 ERICH6BQ5W0A0 696 aa13.45□□□□□ -0.26
PRAMEF4-201ENST00000235349 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
PRAMEF4-201ENST00000235349 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
PRAMEF4-201ENST00000235349 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
PRAMEF4-201ENST00000235349 U2AF1L5P0DN76 240 aaPredicted RBP13.44□□□□□ -0.26
PRAMEF4-201ENST00000235349 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
PRAMEF4-201ENST00000235349 U2AF1Q01081 240 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRAMEF4-201ENST00000235349 HSP90AB2PQ58FF8 381 aa13.44□□□□□ -0.26
PRAMEF4-201ENST00000235349 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
PRAMEF4-201ENST00000235349 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
PRAMEF4-201ENST00000235349 IL13P35225 146 aa13.43□□□□□ -0.26
PRAMEF4-201ENST00000235349 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
PRAMEF4-201ENST00000235349 APAF1O14727 1248 aa13.43□□□□□ -0.26
PRAMEF4-201ENST00000235349 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
PRAMEF4-201ENST00000235349 PXDNQ92626 1479 aa13.42□□□□□ -0.26
PRAMEF4-201ENST00000235349 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
PRAMEF4-201ENST00000235349 GCP02774 474 aa13.41□□□□□ -0.26
PRAMEF4-201ENST00000235349 AMPHP49418 695 aa13.41□□□□□ -0.26
PRAMEF4-201ENST00000235349 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
PRAMEF4-201ENST00000235349 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
PRAMEF4-201ENST00000235349 LTN1O94822 1766 aa13.4□□□□□ -0.26
PRAMEF4-201ENST00000235349 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
PRAMEF4-201ENST00000235349 SPATA31A3Q5VYP0 1347 aa13.4□□□□□ -0.26
PRAMEF4-201ENST00000235349 NFAT5O94916 1531 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 HMOX1P09601 288 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
PRAMEF4-201ENST00000235349 USP19O94966 1318 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms