RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 SSH2Q76I76 1423 aa25.01■■□□□ 1.59
SNX17-201ENST00000233575 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
SNX17-201ENST00000233575 ESCO1Q5FWF5 840 aa25■■□□□ 1.59
SNX17-201ENST00000233575 LRRC7Q96NW7 1537 aa24.99■■□□□ 1.59
SNX17-201ENST00000233575 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
SNX17-201ENST00000233575 FBLN1P23142 703 aa24.98■■□□□ 1.59
SNX17-201ENST00000233575 MTHFSP49914 203 aa24.98■■□□□ 1.59
SNX17-201ENST00000233575 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
SNX17-201ENST00000233575 SENP3-EIF4A1A0A087X0R7 540 aa24.96■■□□□ 1.59
SNX17-201ENST00000233575 C1orf167Q5SNV9 1468 aa24.95■■□□□ 1.59
SNX17-201ENST00000233575 DMRT2Q9Y5R5 561 aa24.95■■□□□ 1.58
SNX17-201ENST00000233575 ATF3P18847 181 aa24.94■■□□□ 1.58
SNX17-201ENST00000233575 DCCP43146 1447 aa24.93■■□□□ 1.58
SNX17-201ENST00000233575 MST1RQ04912 1400 aa24.93■■□□□ 1.58
SNX17-201ENST00000233575 COG3Q96JB2 828 aa24.93■■□□□ 1.58
SNX17-201ENST00000233575 ADAMTS8Q9UP79 889 aa24.92■■□□□ 1.58
SNX17-201ENST00000233575 MSH6P52701 1360 aa24.92■■□□□ 1.58
SNX17-201ENST00000233575 PIK3C2AO00443 1686 aa24.92■■□□□ 1.58
SNX17-201ENST00000233575 OVOS2A0A0J9YW53 1432 aa24.91■■□□□ 1.58
SNX17-201ENST00000233575 OVOS2Q6IE36 1432 aa24.91■■□□□ 1.58
SNX17-201ENST00000233575 SHPRHQ149N8 1683 aa24.91■■□□□ 1.58
SNX17-201ENST00000233575 TTC21AQ8NDW8 1320 aa24.91■■□□□ 1.58
SNX17-201ENST00000233575 MAP2P11137 1827 aaKnown RBP24.9■■□□□ 1.58
SNX17-201ENST00000233575 FOXO3O43524 673 aa24.89■■□□□ 1.57
SNX17-201ENST00000233575 WDR43Q15061 677 aaKnown RBP eCLIP24.89■■□□□ 1.57
SNX17-201ENST00000233575 CADPS2Q86UW7 1296 aa24.88■■□□□ 1.57
SNX17-201ENST00000233575 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
SNX17-201ENST00000233575 PAK3O75914 559 aaPredicted RBP24.87■■□□□ 1.57
SNX17-201ENST00000233575 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
SNX17-201ENST00000233575 POLKQ9UBT6 870 aa24.87■■□□□ 1.57
SNX17-201ENST00000233575 PSME1Q06323 249 aa24.86■■□□□ 1.57
SNX17-201ENST00000233575 BLMP54132 1417 aaPredicted RBP24.86■■□□□ 1.57
SNX17-201ENST00000233575 NUTM2GQ5VZR2 741 aa24.85■■□□□ 1.57
SNX17-201ENST00000233575 EMILIN1Q9Y6C2 1016 aa24.85■■□□□ 1.57
SNX17-201ENST00000233575 COL3A1P02461 1466 aaPredicted RBP24.85■■□□□ 1.57
SNX17-201ENST00000233575 KIF1AQ12756 1690 aa24.85■■□□□ 1.57
SNX17-201ENST00000233575 MARF1Q9Y4F3 1742 aaKnown RBP24.85■■□□□ 1.57
SNX17-201ENST00000233575 CFAP53Q96M91 514 aa24.85■■□□□ 1.57
SNX17-201ENST00000233575 RRS1Q15050 365 aaKnown RBP24.84■■□□□ 1.57
SNX17-201ENST00000233575 AATKQ6ZMQ8 1374 aa24.84■■□□□ 1.57
SNX17-201ENST00000233575 PPM1GO15355 546 aaPredicted RBP24.83■■□□□ 1.57
SNX17-201ENST00000233575 USP31Q70CQ4 1352 aa24.83■■□□□ 1.57
SNX17-201ENST00000233575 SOX12O15370 315 aa24.83■■□□□ 1.56
SNX17-201ENST00000233575 ZBED9Q6R2W3 1325 aa24.82■■□□□ 1.56
SNX17-201ENST00000233575 ABTB2Q8N961 1025 aa24.82■■□□□ 1.56
SNX17-201ENST00000233575 NLRP6P59044 892 aa24.81■■□□□ 1.56
SNX17-201ENST00000233575 DDX17Q92841 729 aaKnown RBP24.81■■□□□ 1.56
SNX17-201ENST00000233575 PNPLA6Q8IY17 1366 aa24.81■■□□□ 1.56
SNX17-201ENST00000233575 INSRP06213 1382 aa24.81■■□□□ 1.56
SNX17-201ENST00000233575 SMG6Q86US8 1419 aaKnown RBP24.8■■□□□ 1.56
SNX17-201ENST00000233575 TRPM3Q9HCF6 1732 aaPredicted RBP24.79■■□□□ 1.56
SNX17-201ENST00000233575 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
SNX17-201ENST00000233575 USP54Q70EL1 1684 aa24.78■■□□□ 1.56
SNX17-201ENST00000233575 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
SNX17-201ENST00000233575 KRT28Q7Z3Y7 464 aa24.77■■□□□ 1.56
SNX17-201ENST00000233575 CDK12Q9NYV4 1490 aaPredicted RBP24.76■■□□□ 1.55
SNX17-201ENST00000233575 LTBP4Q8N2S1 1624 aa24.76■■□□□ 1.55
SNX17-201ENST00000233575 PEAK1Q9H792 1746 aa24.75■■□□□ 1.55
SNX17-201ENST00000233575 BRINP3Q76B58 766 aa24.74■■□□□ 1.55
SNX17-201ENST00000233575 SLAIN2Q9P270 581 aa24.74■■□□□ 1.55
SNX17-201ENST00000233575 DIAPH1O60610 1272 aaKnown RBP24.74■■□□□ 1.55
SNX17-201ENST00000233575 U2SURPO15042 1029 aaKnown RBP24.73■■□□□ 1.55
SNX17-201ENST00000233575 U2AF1L5P0DN76 240 aaPredicted RBP24.73■■□□□ 1.55
SNX17-201ENST00000233575 U2AF1Q01081 240 aaKnown RBP eCLIP24.73■■□□□ 1.55
SNX17-201ENST00000233575 MAP3K19Q56UN5 1328 aa24.71■■□□□ 1.55
SNX17-201ENST00000233575 LMOD2Q6P5Q4 547 aa24.71■■□□□ 1.55
SNX17-201ENST00000233575 PLEKHG5O94827 1062 aa24.69■■□□□ 1.54
SNX17-201ENST00000233575 NUDCQ9Y266 331 aa24.69■■□□□ 1.54
SNX17-201ENST00000233575 ALS2Q96Q42 1657 aa24.69■■□□□ 1.54
SNX17-201ENST00000233575 NPHP3Q7Z494 1330 aa24.69■■□□□ 1.54
SNX17-201ENST00000233575 PXDNQ92626 1479 aa24.68■■□□□ 1.54
SNX17-201ENST00000233575 APAF1O14727 1248 aa24.68■■□□□ 1.54
SNX17-201ENST00000233575 IL13P35225 146 aa24.68■■□□□ 1.54
SNX17-201ENST00000233575 HSP90AB2PQ58FF8 381 aa24.68■■□□□ 1.54
SNX17-201ENST00000233575 NFAT5O94916 1531 aa24.66■■□□□ 1.54
SNX17-201ENST00000233575 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
SNX17-201ENST00000233575 SBNO1A3KN83 1393 aa24.64■■□□□ 1.53
SNX17-201ENST00000233575 LTN1O94822 1766 aa24.64■■□□□ 1.53
SNX17-201ENST00000233575 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
SNX17-201ENST00000233575 SLIT3O75094 1523 aa24.63■■□□□ 1.53
SNX17-201ENST00000233575 EIF4A2Q14240 407 aaKnown RBP24.62■■□□□ 1.53
SNX17-201ENST00000233575 FLT4P35916 1363 aa24.62■■□□□ 1.53
SNX17-201ENST00000233575 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
SNX17-201ENST00000233575 TNS3Q68CZ2 1445 aa24.61■■□□□ 1.53
SNX17-201ENST00000233575 AMPHP49418 695 aa24.61■■□□□ 1.53
SNX17-201ENST00000233575 PLEKHF1Q96S99 279 aa24.61■■□□□ 1.53
SNX17-201ENST00000233575 USP19O94966 1318 aa24.61■■□□□ 1.53
SNX17-201ENST00000233575 MED1Q15648 1581 aaPredicted RBP24.61■■□□□ 1.53
SNX17-201ENST00000233575 GCP02774 474 aa24.6■■□□□ 1.53
SNX17-201ENST00000233575 HMOX1P09601 288 aa24.6■■□□□ 1.53
SNX17-201ENST00000233575 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
SNX17-201ENST00000233575 RRP7AQ9Y3A4 280 aaKnown RBP24.59■■□□□ 1.53
SNX17-201ENST00000233575 SPATA31A3Q5VYP0 1347 aa24.59■■□□□ 1.53
SNX17-201ENST00000233575 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
SNX17-201ENST00000233575 HOXC9P31274 260 aa24.58■■□□□ 1.53
SNX17-201ENST00000233575 CDCA7LQ96GN5 454 aa24.58■■□□□ 1.53
SNX17-201ENST00000233575 RSPH6AQ9H0K4 717 aa24.57■■□□□ 1.52
SNX17-201ENST00000233575 SOS2Q07890 1332 aaPredicted RBP24.57■■□□□ 1.52
SNX17-201ENST00000233575 NEUROD2Q15784 382 aa24.57■■□□□ 1.52
SNX17-201ENST00000233575 ZNF521Q96K83 1311 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms