RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
LAMA4-201ENST00000230538 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
LAMA4-201ENST00000230538 TRAK2O60296 914 aa13.82□□□□□ -0.2
LAMA4-201ENST00000230538 SMC2O95347 1197 aa13.82□□□□□ -0.2
LAMA4-201ENST00000230538 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
LAMA4-201ENST00000230538 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
LAMA4-201ENST00000230538 TRIM5Q9C035 493 aa13.82□□□□□ -0.2
LAMA4-201ENST00000230538 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
LAMA4-201ENST00000230538 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
LAMA4-201ENST00000230538 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
LAMA4-201ENST00000230538 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
LAMA4-201ENST00000230538 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
LAMA4-201ENST00000230538 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
LAMA4-201ENST00000230538 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
LAMA4-201ENST00000230538 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
LAMA4-201ENST00000230538 NEK4P51957 841 aa13.81□□□□□ -0.2
LAMA4-201ENST00000230538 MAGEC2Q9UBF1 373 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-201ENST00000230538 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 RRBP1Q9P2E9 1410 aaKnown RBP13.8□□□□□ -0.2
LAMA4-201ENST00000230538 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 EXOSC9Q06265 439 aaKnown RBP13.8□□□□□ -0.2
LAMA4-201ENST00000230538 ERC1Q8IUD2 1116 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-201ENST00000230538 MCM2P49736 904 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 FILIP1LQ4L180 1135 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-201ENST00000230538 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-201ENST00000230538 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
LAMA4-201ENST00000230538 MBD3O95983 291 aa13.8□□□□□ -0.2
LAMA4-201ENST00000230538 SMG6Q86US8 1419 aaKnown RBP13.79□□□□□ -0.2
LAMA4-201ENST00000230538 TXLNAP40222 546 aa13.79□□□□□ -0.2
LAMA4-201ENST00000230538 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
LAMA4-201ENST00000230538 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
LAMA4-201ENST00000230538 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
LAMA4-201ENST00000230538 PDCP20941 246 aa13.79□□□□□ -0.2
LAMA4-201ENST00000230538 GNAI2P04899 355 aa13.79□□□□□ -0.2
LAMA4-201ENST00000230538 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
LAMA4-201ENST00000230538 BCAR3O75815 825 aa13.78□□□□□ -0.2
LAMA4-201ENST00000230538 TMEM132AQ24JP5 1023 aa13.78□□□□□ -0.2
LAMA4-201ENST00000230538 RABEP1Q15276 862 aa13.78□□□□□ -0.2
LAMA4-201ENST00000230538 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
LAMA4-201ENST00000230538 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
LAMA4-201ENST00000230538 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
LAMA4-201ENST00000230538 CCP110O43303 1012 aa13.78□□□□□ -0.2
LAMA4-201ENST00000230538 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.2
LAMA4-201ENST00000230538 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.2
LAMA4-201ENST00000230538 DCTN1Q14203 1278 aa13.77□□□□□ -0.2
LAMA4-201ENST00000230538 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.2
LAMA4-201ENST00000230538 CNNM1Q9NRU3 951 aa13.77□□□□□ -0.2
LAMA4-201ENST00000230538 BRPF3Q9ULD4 1205 aa13.77□□□□□ -0.21
LAMA4-201ENST00000230538 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
LAMA4-201ENST00000230538 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
LAMA4-201ENST00000230538 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-201ENST00000230538 STK38Q15208 465 aa13.76□□□□□ -0.21
LAMA4-201ENST00000230538 CCAR1Q8IX12 1150 aaKnown RBP13.76□□□□□ -0.21
LAMA4-201ENST00000230538 KRT18P05783 430 aaKnown RBP13.76□□□□□ -0.21
LAMA4-201ENST00000230538 FIBPO43427 364 aa13.76□□□□□ -0.21
LAMA4-201ENST00000230538 SKIDA1Q1XH10 827 aa13.76□□□□□ -0.21
LAMA4-201ENST00000230538 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
LAMA4-201ENST00000230538 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.21
LAMA4-201ENST00000230538 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
LAMA4-201ENST00000230538 SYCP1Q15431 976 aa13.75□□□□□ -0.21
LAMA4-201ENST00000230538 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
LAMA4-201ENST00000230538 MAP7D2Q96T17 732 aa13.75□□□□□ -0.21
LAMA4-201ENST00000230538 GNL3LQ9NVN8 582 aaKnown RBP13.75□□□□□ -0.21
LAMA4-201ENST00000230538 PIP4K2AP48426 406 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-201ENST00000230538 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 CWC15Q9P013 229 aaKnown RBP13.74□□□□□ -0.21
LAMA4-201ENST00000230538 CFTRP13569 1480 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 MTERF4Q7Z6M4 381 aaKnown RBP13.74□□□□□ -0.21
LAMA4-201ENST00000230538 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 NBPF1Q3BBV0 1214 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
LAMA4-201ENST00000230538 H0YHG0 523 aa13.73□□□□□ -0.21
LAMA4-201ENST00000230538 STK3Q13188 491 aa13.73□□□□□ -0.21
LAMA4-201ENST00000230538 TATP17735 454 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-201ENST00000230538 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
LAMA4-201ENST00000230538 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
LAMA4-201ENST00000230538 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
LAMA4-201ENST00000230538 JMYQ8N9B5 988 aa13.73□□□□□ -0.21
LAMA4-201ENST00000230538 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
LAMA4-201ENST00000230538 ANKRD1Q15327 319 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 SERPINC1P01008 464 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
LAMA4-201ENST00000230538 PDE3AQ14432 1141 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
LAMA4-201ENST00000230538 STK11IPQ8N1F8 1099 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 SIL1Q9H173 461 aa13.72□□□□□ -0.21
LAMA4-201ENST00000230538 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
LAMA4-201ENST00000230538 CCDC69A6NI79 296 aa13.71□□□□□ -0.21
LAMA4-201ENST00000230538 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms