RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 EIF3AQ14152 1382 aaKnown RBP14.54□□□□□ -0.08
CDCA3-201ENST00000229265 GLI3P10071 1580 aa14.53□□□□□ -0.08
CDCA3-201ENST00000229265 POGKQ9P215 609 aa14.53□□□□□ -0.08
CDCA3-201ENST00000229265 PLCH1Q4KWH8 1693 aa14.52□□□□□ -0.08
CDCA3-201ENST00000229265 QRICH2Q9H0J4 1663 aa14.52□□□□□ -0.08
CDCA3-201ENST00000229265 ATRNO75882 1429 aa14.52□□□□□ -0.08
CDCA3-201ENST00000229265 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-201ENST00000229265 TNS3Q68CZ2 1445 aa14.51□□□□□ -0.09
CDCA3-201ENST00000229265 ANKARQ7Z5J8 1434 aa14.51□□□□□ -0.09
CDCA3-201ENST00000229265 FNBP4Q8N3X1 1017 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-201ENST00000229265 QTRT2Q9H974 415 aaKnown RBP14.51□□□□□ -0.09
CDCA3-201ENST00000229265 GTF3C3Q9Y5Q9 886 aa14.51□□□□□ -0.09
CDCA3-201ENST00000229265 BRWD3Q6RI45 1802 aa14.5□□□□□ -0.09
CDCA3-201ENST00000229265 NRAPQ86VF7 1730 aa14.5□□□□□ -0.09
CDCA3-201ENST00000229265 SLIT2O94813 1529 aa14.5□□□□□ -0.09
CDCA3-201ENST00000229265 PER1O15534 1290 aaPredicted RBP14.49□□□□□ -0.09
CDCA3-201ENST00000229265 NGLY1Q96IV0 654 aa14.49□□□□□ -0.09
CDCA3-201ENST00000229265 SBNO2Q9Y2G9 1366 aa14.48□□□□□ -0.09
CDCA3-201ENST00000229265 ZNF772Q68DY9 489 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-201ENST00000229265 UPF1Q92900 1129 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDCA3-201ENST00000229265 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
CDCA3-201ENST00000229265 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.47□□□□□ -0.09
CDCA3-201ENST00000229265 RXRBP28702 533 aa14.47□□□□□ -0.09
CDCA3-201ENST00000229265 NUDT16Q96DE0 195 aaKnown RBP14.47□□□□□ -0.09
CDCA3-201ENST00000229265 USP21Q9UK80 565 aa14.47□□□□□ -0.09
CDCA3-201ENST00000229265 SBNO1A3KN83 1393 aa14.47□□□□□ -0.09
CDCA3-201ENST00000229265 PHRF1Q9P1Y6 1649 aaKnown RBP14.46□□□□□ -0.09
CDCA3-201ENST00000229265 FAM83GA6ND36 823 aa14.46□□□□□ -0.09
CDCA3-201ENST00000229265 CDK12Q9NYV4 1490 aaPredicted RBP14.45□□□□□ -0.1
CDCA3-201ENST00000229265 NUTM2GQ5VZR2 741 aa14.45□□□□□ -0.1
CDCA3-201ENST00000229265 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
CDCA3-201ENST00000229265 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
CDCA3-201ENST00000229265 MRS2Q9HD23 443 aa14.44□□□□□ -0.1
CDCA3-201ENST00000229265 BRD4O60885 1362 aaPredicted RBP14.44□□□□□ -0.1
CDCA3-201ENST00000229265 INSRP06213 1382 aa14.44□□□□□ -0.1
CDCA3-201ENST00000229265 NPC1L1Q9UHC9 1359 aa14.43□□□□□ -0.1
CDCA3-201ENST00000229265 MYBBP1AQ9BQG0 1328 aaKnown RBP14.42□□□□□ -0.1
CDCA3-201ENST00000229265 RBM6P78332 1123 aaKnown RBP14.42□□□□□ -0.1
CDCA3-201ENST00000229265 PSME1Q06323 249 aa14.42□□□□□ -0.1
CDCA3-201ENST00000229265 LMOD2Q6P5Q4 547 aa14.42□□□□□ -0.1
CDCA3-201ENST00000229265 ACEP12821 1306 aa14.41□□□□□ -0.1
CDCA3-201ENST00000229265 TMC1Q8TDI8 760 aa14.41□□□□□ -0.1
CDCA3-201ENST00000229265 POLR3AO14802 1390 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-201ENST00000229265 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
CDCA3-201ENST00000229265 POLR3GLQ9BT43 218 aa14.4□□□□□ -0.1
CDCA3-201ENST00000229265 NWD2Q9ULI1 1742 aa14.4□□□□□ -0.1
CDCA3-201ENST00000229265 CENPJQ9HC77 1338 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-201ENST00000229265 PIK3C2AO00443 1686 aa14.39□□□□□ -0.11
CDCA3-201ENST00000229265 NLRP13Q86W25 1043 aa14.39□□□□□ -0.11
CDCA3-201ENST00000229265 PNISRQ8TF01 805 aaKnown RBP14.39□□□□□ -0.11
CDCA3-201ENST00000229265 PANK3Q9H999 370 aa14.39□□□□□ -0.11
CDCA3-201ENST00000229265 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
CDCA3-201ENST00000229265 PARD3Q8TEW0 1356 aa14.38□□□□□ -0.11
CDCA3-201ENST00000229265 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
CDCA3-201ENST00000229265 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
CDCA3-201ENST00000229265 UNC5CLQ8IV45 518 aa14.38□□□□□ -0.11
CDCA3-201ENST00000229265 GJD4Q96KN9 370 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-201ENST00000229265 PPIP5K1Q6PFW1 1433 aa14.38□□□□□ -0.11
CDCA3-201ENST00000229265 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
CDCA3-201ENST00000229265 LMO7Q8WWI1 1683 aa14.37□□□□□ -0.11
CDCA3-201ENST00000229265 NGDNQ8NEJ9 315 aaKnown RBP14.37□□□□□ -0.11
CDCA3-201ENST00000229265 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-201ENST00000229265 KNSTRNQ9Y448 316 aa14.37□□□□□ -0.11
CDCA3-201ENST00000229265 CD163L1Q9NR16 1453 aa14.37□□□□□ -0.11
CDCA3-201ENST00000229265 ERICH6BQ5W0A0 696 aa14.36□□□□□ -0.11
CDCA3-201ENST00000229265 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
CDCA3-201ENST00000229265 COL14A1Q05707 1796 aaKnown RBP14.36□□□□□ -0.11
CDCA3-201ENST00000229265 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
CDCA3-201ENST00000229265 CAMTA1Q9Y6Y1 1673 aa14.36□□□□□ -0.11
CDCA3-201ENST00000229265 SRCAPQ6ZRS2 3230 aa14.35□□□□□ -0.11
CDCA3-201ENST00000229265 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
CDCA3-201ENST00000229265 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDCA3-201ENST00000229265 FAM182BQ5T319 152 aa14.35□□□□□ -0.11
CDCA3-201ENST00000229265 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
CDCA3-201ENST00000229265 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
CDCA3-201ENST00000229265 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
CDCA3-201ENST00000229265 COL18A1P39060 1754 aa14.34□□□□□ -0.11
CDCA3-201ENST00000229265 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
CDCA3-201ENST00000229265 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
CDCA3-201ENST00000229265 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.11
CDCA3-201ENST00000229265 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
CDCA3-201ENST00000229265 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
CDCA3-201ENST00000229265 USP6P35125 1406 aa14.32□□□□□ -0.12
CDCA3-201ENST00000229265 SRPK2P78362 688 aaKnown RBP14.32□□□□□ -0.12
CDCA3-201ENST00000229265 VPS72Q15906 364 aa14.32□□□□□ -0.12
CDCA3-201ENST00000229265 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
CDCA3-201ENST00000229265 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
CDCA3-201ENST00000229265 USP19O94966 1318 aa14.32□□□□□ -0.12
CDCA3-201ENST00000229265 MON2Q7Z3U7 1717 aa14.31□□□□□ -0.12
CDCA3-201ENST00000229265 SEPT12Q8IYM1 358 aa14.3□□□□□ -0.12
CDCA3-201ENST00000229265 EVC2Q86UK5 1308 aa14.3□□□□□ -0.12
CDCA3-201ENST00000229265 NINLQ9Y2I6 1382 aa14.3□□□□□ -0.12
CDCA3-201ENST00000229265 SLIT3O75094 1523 aa14.3□□□□□ -0.12
CDCA3-201ENST00000229265 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-201ENST00000229265 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
CDCA3-201ENST00000229265 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-201ENST00000229265 CPSF1Q10570 1443 aaKnown RBP14.29□□□□□ -0.12
CDCA3-201ENST00000229265 NEFLP07196 543 aa14.28□□□□□ -0.12
CDCA3-201ENST00000229265 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
CDCA3-201ENST00000229265 SPATA31A5Q5VU36 1347 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms