RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 MYT1Q01538 1121 aa10.77□□□□□ -0.69
CCL13-201ENST00000225844 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
CCL13-201ENST00000225844 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
CCL13-201ENST00000225844 NBPF8Q3BBV2 869 aa10.76□□□□□ -0.69
CCL13-201ENST00000225844 ROCK2O75116 1388 aaKnown RBP10.76□□□□□ -0.69
CCL13-201ENST00000225844 EIF3AQ14152 1382 aaKnown RBP10.75□□□□□ -0.69
CCL13-201ENST00000225844 TECPR2O15040 1411 aa10.75□□□□□ -0.69
CCL13-201ENST00000225844 COL22A1Q8NFW1 1626 aaPredicted RBP10.74□□□□□ -0.69
CCL13-201ENST00000225844 BAG6P46379 1132 aa10.74□□□□□ -0.69
CCL13-201ENST00000225844 KRT27Q7Z3Y8 459 aa10.74□□□□□ -0.69
CCL13-201ENST00000225844 CARD11Q9BXL7 1154 aa10.74□□□□□ -0.69
CCL13-201ENST00000225844 YTHDC2Q9H6S0 1430 aaKnown RBP10.74□□□□□ -0.69
CCL13-201ENST00000225844 PXDNQ92626 1479 aa10.74□□□□□ -0.69
CCL13-201ENST00000225844 ADGRB1O14514 1584 aa10.73□□□□□ -0.69
CCL13-201ENST00000225844 VPS72Q15906 364 aa10.72□□□□□ -0.69
CCL13-201ENST00000225844 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
CCL13-201ENST00000225844 PROM2Q8N271 834 aa10.72□□□□□ -0.69
CCL13-201ENST00000225844 STK26Q9P289 416 aa10.72□□□□□ -0.69
CCL13-201ENST00000225844 SLIT2O94813 1529 aa10.72□□□□□ -0.69
CCL13-201ENST00000225844 DLC1Q96QB1 1528 aa10.72□□□□□ -0.69
CCL13-201ENST00000225844 GLI3P10071 1580 aa10.71□□□□□ -0.69
CCL13-201ENST00000225844 SPATA31A3Q5VYP0 1347 aa10.71□□□□□ -0.69
CCL13-201ENST00000225844 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
CCL13-201ENST00000225844 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
CCL13-201ENST00000225844 TRPM1Q7Z4N2 1603 aa10.71□□□□□ -0.69
CCL13-201ENST00000225844 LRP5O75197 1615 aa10.7□□□□□ -0.7
CCL13-201ENST00000225844 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
CCL13-201ENST00000225844 R3HDM1Q15032 1099 aaKnown RBP10.7□□□□□ -0.7
CCL13-201ENST00000225844 KRT28Q7Z3Y7 464 aa10.7□□□□□ -0.7
CCL13-201ENST00000225844 WAPLQ7Z5K2 1190 aa10.7□□□□□ -0.7
CCL13-201ENST00000225844 CABLES1Q8TDN4 633 aa10.7□□□□□ -0.7
CCL13-201ENST00000225844 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCL13-201ENST00000225844 EN1Q05925 392 aaPredicted RBP10.69□□□□□ -0.7
CCL13-201ENST00000225844 PUS7Q96PZ0 661 aaKnown RBP10.69□□□□□ -0.7
CCL13-201ENST00000225844 POGKQ9P215 609 aa10.69□□□□□ -0.7
CCL13-201ENST00000225844 SBNO2Q9Y2G9 1366 aa10.68□□□□□ -0.7
CCL13-201ENST00000225844 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
CCL13-201ENST00000225844 TRAK1Q9UPV9 953 aa10.68□□□□□ -0.7
CCL13-201ENST00000225844 CDC42BPGQ6DT37 1551 aa10.68□□□□□ -0.7
CCL13-201ENST00000225844 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
CCL13-201ENST00000225844 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
CCL13-201ENST00000225844 YY1P25490 414 aa10.67□□□□□ -0.7
CCL13-201ENST00000225844 PSME1Q06323 249 aa10.67□□□□□ -0.7
CCL13-201ENST00000225844 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
CCL13-201ENST00000225844 FAM182BQ5T319 152 aa10.66□□□□□ -0.7
CCL13-201ENST00000225844 PRAM1Q96QH2 718 aa10.66□□□□□ -0.7
CCL13-201ENST00000225844 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
CCL13-201ENST00000225844 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
CCL13-201ENST00000225844 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
CCL13-201ENST00000225844 USP32Q8NFA0 1604 aa10.65□□□□□ -0.7
CCL13-201ENST00000225844 USP47Q96K76 1375 aa10.65□□□□□ -0.71
CCL13-201ENST00000225844 PLEKHH1Q9ULM0 1364 aa10.65□□□□□ -0.71
CCL13-201ENST00000225844 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
CCL13-201ENST00000225844 FAM83GA6ND36 823 aa10.64□□□□□ -0.71
CCL13-201ENST00000225844 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
CCL13-201ENST00000225844 EVC2Q86UK5 1308 aa10.63□□□□□ -0.71
CCL13-201ENST00000225844 ST20-MTHFSA0A0A6YYL1 179 aa10.63□□□□□ -0.71
CCL13-201ENST00000225844 EZH2Q15910 746 aaKnown RBP10.63□□□□□ -0.71
CCL13-201ENST00000225844 CHRDL2Q6WN34 429 aa10.63□□□□□ -0.71
CCL13-201ENST00000225844 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
CCL13-201ENST00000225844 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
CCL13-201ENST00000225844 TMF1P82094 1093 aa10.62□□□□□ -0.71
CCL13-201ENST00000225844 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
CCL13-201ENST00000225844 ARHGEF10O15013 1369 aa10.62□□□□□ -0.71
CCL13-201ENST00000225844 WASLO00401 505 aaPredicted RBP10.61□□□□□ -0.71
CCL13-201ENST00000225844 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
CCL13-201ENST00000225844 TESK2Q96S53 571 aa10.61□□□□□ -0.71
CCL13-201ENST00000225844 TRIM37O94972 964 aa10.6□□□□□ -0.71
CCL13-201ENST00000225844 HSPA5P11021 654 aaKnown RBP10.6□□□□□ -0.71
CCL13-201ENST00000225844 SAFB2Q14151 953 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCL13-201ENST00000225844 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
CCL13-201ENST00000225844 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
CCL13-201ENST00000225844 SBNO1A3KN83 1393 aa10.6□□□□□ -0.71
CCL13-201ENST00000225844 APBA3O96018 575 aa10.59□□□□□ -0.71
CCL13-201ENST00000225844 ADGRB2O60241 1585 aa10.59□□□□□ -0.71
CCL13-201ENST00000225844 KIF1AQ12756 1690 aa10.59□□□□□ -0.71
CCL13-201ENST00000225844 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 ARHGEF28Q8N1W1 1705 aaKnown RBP10.58□□□□□ -0.72
CCL13-201ENST00000225844 NINLQ9Y2I6 1382 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 CDK19Q9BWU1 502 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 CCDC61Q9Y6R9 512 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
CCL13-201ENST00000225844 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
CCL13-201ENST00000225844 NBPF14Q5TI25 921 aa10.57□□□□□ -0.72
CCL13-201ENST00000225844 DISP2A7MBM2 1401 aa10.57□□□□□ -0.72
CCL13-201ENST00000225844 MINK1Q8N4C8 1332 aaPredicted RBP10.57□□□□□ -0.72
CCL13-201ENST00000225844 SRPK2P78362 688 aaKnown RBP10.56□□□□□ -0.72
CCL13-201ENST00000225844 FAM196AQ6ZSG2 479 aa10.56□□□□□ -0.72
CCL13-201ENST00000225844 PRDM11Q9NQV5 511 aa10.56□□□□□ -0.72
CCL13-201ENST00000225844 FMN2Q9NZ56 1722 aa10.55□□□□□ -0.72
CCL13-201ENST00000225844 NWD2Q9ULI1 1742 aa10.55□□□□□ -0.72
CCL13-201ENST00000225844 BRD4O60885 1362 aaPredicted RBP10.55□□□□□ -0.72
CCL13-201ENST00000225844 PLEKHG3A1L390 1219 aa10.55□□□□□ -0.72
CCL13-201ENST00000225844 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
CCL13-201ENST00000225844 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
CCL13-201ENST00000225844 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
CCL13-201ENST00000225844 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
CCL13-201ENST00000225844 SPON1Q9HCB6 807 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms