RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
SUPT4H1-201ENST00000225504 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
SUPT4H1-201ENST00000225504 COL22A1Q8NFW1 1626 aaPredicted RBP20.1■□□□□ 0.81
SUPT4H1-201ENST00000225504 CDCA8Q53HL2 280 aa20.09■□□□□ 0.81
SUPT4H1-201ENST00000225504 ALS2Q96Q42 1657 aa20.09■□□□□ 0.81
SUPT4H1-201ENST00000225504 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
SUPT4H1-201ENST00000225504 ABTB2Q8N961 1025 aa20.08■□□□□ 0.81
SUPT4H1-201ENST00000225504 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
SUPT4H1-201ENST00000225504 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
SUPT4H1-201ENST00000225504 ARHGEF10O15013 1369 aa20.07■□□□□ 0.8
SUPT4H1-201ENST00000225504 TTC21BQ7Z4L5 1316 aa20.06■□□□□ 0.8
SUPT4H1-201ENST00000225504 A0A1W2PP64 1363 aa20.05■□□□□ 0.8
SUPT4H1-201ENST00000225504 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
SUPT4H1-201ENST00000225504 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
SUPT4H1-201ENST00000225504 TERF2IPQ9NYB0 399 aa20.05■□□□□ 0.8
SUPT4H1-201ENST00000225504 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
SUPT4H1-201ENST00000225504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.05■□□□□ 0.8
SUPT4H1-201ENST00000225504 ZRANB1Q9UGI0 708 aa20.04■□□□□ 0.8
SUPT4H1-201ENST00000225504 BRD4O60885 1362 aaPredicted RBP20.03■□□□□ 0.8
SUPT4H1-201ENST00000225504 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
SUPT4H1-201ENST00000225504 C8orf37Q96NL8 207 aa20.02■□□□□ 0.8
SUPT4H1-201ENST00000225504 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.79
SUPT4H1-201ENST00000225504 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
SUPT4H1-201ENST00000225504 NLRP6P59044 892 aa20.01■□□□□ 0.79
SUPT4H1-201ENST00000225504 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
SUPT4H1-201ENST00000225504 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
SUPT4H1-201ENST00000225504 MYOM1P52179 1685 aa20■□□□□ 0.79
SUPT4H1-201ENST00000225504 NLRP13Q86W25 1043 aa20■□□□□ 0.79
SUPT4H1-201ENST00000225504 NME9Q86XW9 330 aa20■□□□□ 0.79
SUPT4H1-201ENST00000225504 NGLY1Q96IV0 654 aa20■□□□□ 0.79
SUPT4H1-201ENST00000225504 ANKRD36BQ8N2N9 1353 aa20■□□□□ 0.79
SUPT4H1-201ENST00000225504 KIF7Q2M1P5 1343 aa20■□□□□ 0.79
SUPT4H1-201ENST00000225504 NRKQ7Z2Y5 1582 aa19.99■□□□□ 0.79
SUPT4H1-201ENST00000225504 TTC21AQ8NDW8 1320 aa19.99■□□□□ 0.79
SUPT4H1-201ENST00000225504 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
SUPT4H1-201ENST00000225504 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
SUPT4H1-201ENST00000225504 PIK3C2AO00443 1686 aa19.98■□□□□ 0.79
SUPT4H1-201ENST00000225504 AFF2P51816 1311 aa19.98■□□□□ 0.79
SUPT4H1-201ENST00000225504 CRYBG1Q9Y4K1 1723 aa19.98■□□□□ 0.79
SUPT4H1-201ENST00000225504 EDC4Q6P2E9 1401 aaKnown RBP19.98■□□□□ 0.79
SUPT4H1-201ENST00000225504 FAM83GA6ND36 823 aa19.98■□□□□ 0.79
SUPT4H1-201ENST00000225504 USP19O94966 1318 aa19.97■□□□□ 0.79
SUPT4H1-201ENST00000225504 ZC3H6P61129 1189 aaKnown RBP19.97■□□□□ 0.79
SUPT4H1-201ENST00000225504 GCP02774 474 aa19.96■□□□□ 0.79
SUPT4H1-201ENST00000225504 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
SUPT4H1-201ENST00000225504 PANK3Q9H999 370 aa19.95■□□□□ 0.78
SUPT4H1-201ENST00000225504 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
SUPT4H1-201ENST00000225504 WASHC2AQ641Q2 1341 aa19.95■□□□□ 0.78
SUPT4H1-201ENST00000225504 FNBP4Q8N3X1 1017 aaPredicted RBP19.93■□□□□ 0.78
SUPT4H1-201ENST00000225504 CCDC7Q96M83 1385 aa19.93■□□□□ 0.78
SUPT4H1-201ENST00000225504 PHRF1Q9P1Y6 1649 aaKnown RBP19.93■□□□□ 0.78
SUPT4H1-201ENST00000225504 FYB1O15117 783 aa19.92■□□□□ 0.78
SUPT4H1-201ENST00000225504 SOX12O15370 315 aa19.92■□□□□ 0.78
SUPT4H1-201ENST00000225504 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
SUPT4H1-201ENST00000225504 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
SUPT4H1-201ENST00000225504 KIAA0232Q92628 1395 aa19.92■□□□□ 0.78
SUPT4H1-201ENST00000225504 GGNBP2Q9H3C7 697 aa19.91■□□□□ 0.78
SUPT4H1-201ENST00000225504 USP21Q9UK80 565 aa19.91■□□□□ 0.78
SUPT4H1-201ENST00000225504 BCL9LQ86UU0 1499 aa19.9■□□□□ 0.78
SUPT4H1-201ENST00000225504 SLIT3O75094 1523 aa19.9■□□□□ 0.78
SUPT4H1-201ENST00000225504 NSD3Q9BZ95 1437 aa19.89■□□□□ 0.77
SUPT4H1-201ENST00000225504 ZNF772Q68DY9 489 aaPredicted RBP19.89■□□□□ 0.77
SUPT4H1-201ENST00000225504 PRDM11Q9NQV5 511 aa19.89■□□□□ 0.77
SUPT4H1-201ENST00000225504 SLIT2O94813 1529 aa19.88■□□□□ 0.77
SUPT4H1-201ENST00000225504 ZBTB7CA1YPR0 619 aa19.88■□□□□ 0.77
SUPT4H1-201ENST00000225504 FBLN1P23142 703 aa19.88■□□□□ 0.77
SUPT4H1-201ENST00000225504 ILDR2Q71H61 639 aa19.88■□□□□ 0.77
SUPT4H1-201ENST00000225504 QTRT2Q9H974 415 aaKnown RBP19.88■□□□□ 0.77
SUPT4H1-201ENST00000225504 BTG4Q9NY30 223 aa19.87■□□□□ 0.77
SUPT4H1-201ENST00000225504 KCNH5Q8NCM2 988 aa19.86■□□□□ 0.77
SUPT4H1-201ENST00000225504 OVOS2A0A0J9YW53 1432 aa19.86■□□□□ 0.77
SUPT4H1-201ENST00000225504 OVOS2Q6IE36 1432 aa19.86■□□□□ 0.77
SUPT4H1-201ENST00000225504 UNC5CLQ8IV45 518 aa19.86■□□□□ 0.77
SUPT4H1-201ENST00000225504 COG3Q96JB2 828 aa19.86■□□□□ 0.77
SUPT4H1-201ENST00000225504 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
SUPT4H1-201ENST00000225504 CPDO75976 1380 aa19.85■□□□□ 0.77
SUPT4H1-201ENST00000225504 PLCH1Q4KWH8 1693 aa19.84■□□□□ 0.77
SUPT4H1-201ENST00000225504 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
SUPT4H1-201ENST00000225504 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
SUPT4H1-201ENST00000225504 NFAT5O94916 1531 aa19.83■□□□□ 0.77
SUPT4H1-201ENST00000225504 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.76
SUPT4H1-201ENST00000225504 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
SUPT4H1-201ENST00000225504 CGNL1Q0VF96 1302 aa19.81■□□□□ 0.76
SUPT4H1-201ENST00000225504 TRPC5Q9UL62 973 aaPredicted RBP19.81■□□□□ 0.76
SUPT4H1-201ENST00000225504 CAMTA1Q9Y6Y1 1673 aa19.81■□□□□ 0.76
SUPT4H1-201ENST00000225504 ATRNO75882 1429 aa19.81■□□□□ 0.76
SUPT4H1-201ENST00000225504 KIF20BQ96Q89 1820 aa19.8■□□□□ 0.76
SUPT4H1-201ENST00000225504 RXRBP28702 533 aa19.79■□□□□ 0.76
SUPT4H1-201ENST00000225504 STRN4Q9NRL3 753 aa19.79■□□□□ 0.76
SUPT4H1-201ENST00000225504 AATKQ6ZMQ8 1374 aa19.79■□□□□ 0.76
SUPT4H1-201ENST00000225504 COL18A1P39060 1754 aa19.79■□□□□ 0.76
SUPT4H1-201ENST00000225504 NWD2Q9ULI1 1742 aa19.79■□□□□ 0.76
SUPT4H1-201ENST00000225504 KNSTRNQ9Y448 316 aa19.79■□□□□ 0.76
SUPT4H1-201ENST00000225504 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
SUPT4H1-201ENST00000225504 VPS72Q15906 364 aa19.78■□□□□ 0.76
SUPT4H1-201ENST00000225504 GJD4Q96KN9 370 aaPredicted RBP19.78■□□□□ 0.76
SUPT4H1-201ENST00000225504 NRAPQ86VF7 1730 aa19.77■□□□□ 0.76
SUPT4H1-201ENST00000225504 EVA1CP58658 441 aa19.77■□□□□ 0.76
SUPT4H1-201ENST00000225504 RBM6P78332 1123 aaKnown RBP19.77■□□□□ 0.76
SUPT4H1-201ENST00000225504 RRS1Q15050 365 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms