RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 SIRT1Q96EB6 747 aa17■□□□□ 0.31
PLOD3-201ENST00000223127 PTPRUQ92729 1446 aa17■□□□□ 0.31
PLOD3-201ENST00000223127 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
PLOD3-201ENST00000223127 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
PLOD3-201ENST00000223127 GOLGA2Q08379 1002 aa17■□□□□ 0.31
PLOD3-201ENST00000223127 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
PLOD3-201ENST00000223127 PRR36Q9H6K5 1346 aa16.99■□□□□ 0.31
PLOD3-201ENST00000223127 PLIN1O60240 522 aa16.99■□□□□ 0.31
PLOD3-201ENST00000223127 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
PLOD3-201ENST00000223127 CRBNQ96SW2 442 aa16.98■□□□□ 0.31
PLOD3-201ENST00000223127 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
PLOD3-201ENST00000223127 RIMS1Q86UR5 1692 aaKnown RBP16.98■□□□□ 0.31
PLOD3-201ENST00000223127 ARHGAP23Q9P227 1491 aa16.98■□□□□ 0.31
PLOD3-201ENST00000223127 ZRANB1Q9UGI0 708 aa16.98■□□□□ 0.31
PLOD3-201ENST00000223127 SLIT1O75093 1534 aa16.98■□□□□ 0.31
PLOD3-201ENST00000223127 NME9Q86XW9 330 aa16.97■□□□□ 0.31
PLOD3-201ENST00000223127 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
PLOD3-201ENST00000223127 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
PLOD3-201ENST00000223127 CPS1P31327 1500 aa16.97■□□□□ 0.31
PLOD3-201ENST00000223127 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
PLOD3-201ENST00000223127 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
PLOD3-201ENST00000223127 DUSP27Q5VZP5 1158 aa16.96■□□□□ 0.3
PLOD3-201ENST00000223127 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.3
PLOD3-201ENST00000223127 ATP7BP35670 1465 aa16.96■□□□□ 0.3
PLOD3-201ENST00000223127 MED14O60244 1454 aa16.95■□□□□ 0.3
PLOD3-201ENST00000223127 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
PLOD3-201ENST00000223127 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
PLOD3-201ENST00000223127 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
PLOD3-201ENST00000223127 GSE1Q14687 1217 aa16.94■□□□□ 0.3
PLOD3-201ENST00000223127 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
PLOD3-201ENST00000223127 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
PLOD3-201ENST00000223127 CPSF1Q10570 1443 aaKnown RBP16.93■□□□□ 0.3
PLOD3-201ENST00000223127 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
PLOD3-201ENST00000223127 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
PLOD3-201ENST00000223127 KCNA6P17658 529 aa16.93■□□□□ 0.3
PLOD3-201ENST00000223127 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
PLOD3-201ENST00000223127 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
PLOD3-201ENST00000223127 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
PLOD3-201ENST00000223127 RBM33Q96EV2 1170 aaKnown RBP16.92■□□□□ 0.3
PLOD3-201ENST00000223127 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
PLOD3-201ENST00000223127 ANKLE2Q86XL3 938 aa16.91■□□□□ 0.3
PLOD3-201ENST00000223127 EDC4Q6P2E9 1401 aaKnown RBP16.91■□□□□ 0.3
PLOD3-201ENST00000223127 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
PLOD3-201ENST00000223127 ACEP12821 1306 aa16.9■□□□□ 0.3
PLOD3-201ENST00000223127 POLKQ9UBT6 870 aa16.9■□□□□ 0.3
PLOD3-201ENST00000223127 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
PLOD3-201ENST00000223127 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
PLOD3-201ENST00000223127 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
PLOD3-201ENST00000223127 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
PLOD3-201ENST00000223127 COG3Q96JB2 828 aa16.89■□□□□ 0.29
PLOD3-201ENST00000223127 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
PLOD3-201ENST00000223127 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-201ENST00000223127 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
PLOD3-201ENST00000223127 E9PSI1 815 aa16.87■□□□□ 0.29
PLOD3-201ENST00000223127 KIF20BQ96Q89 1820 aa16.87■□□□□ 0.29
PLOD3-201ENST00000223127 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
PLOD3-201ENST00000223127 SOX12O15370 315 aa16.87■□□□□ 0.29
PLOD3-201ENST00000223127 ANKRD26Q9UPS8 1709 aa16.86■□□□□ 0.29
PLOD3-201ENST00000223127 C8orf34Q49A92 452 aa16.85■□□□□ 0.29
PLOD3-201ENST00000223127 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
PLOD3-201ENST00000223127 COL3A1P02461 1466 aaPredicted RBP16.85■□□□□ 0.29
PLOD3-201ENST00000223127 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
PLOD3-201ENST00000223127 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
PLOD3-201ENST00000223127 ADAMTSL3P82987 1691 aa16.85■□□□□ 0.29
PLOD3-201ENST00000223127 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
PLOD3-201ENST00000223127 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
PLOD3-201ENST00000223127 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
PLOD3-201ENST00000223127 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
PLOD3-201ENST00000223127 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
PLOD3-201ENST00000223127 HMOX1P09601 288 aa16.83■□□□□ 0.29
PLOD3-201ENST00000223127 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.29
PLOD3-201ENST00000223127 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
PLOD3-201ENST00000223127 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
PLOD3-201ENST00000223127 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
PLOD3-201ENST00000223127 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
PLOD3-201ENST00000223127 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
PLOD3-201ENST00000223127 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
PLOD3-201ENST00000223127 BCAR3O75815 825 aa16.81■□□□□ 0.28
PLOD3-201ENST00000223127 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
PLOD3-201ENST00000223127 PRKAR2BP31323 418 aa16.8■□□□□ 0.28
PLOD3-201ENST00000223127 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-201ENST00000223127 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-201ENST00000223127 ITSN1Q15811 1721 aa16.8■□□□□ 0.28
PLOD3-201ENST00000223127 USP6P35125 1406 aa16.8■□□□□ 0.28
PLOD3-201ENST00000223127 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
PLOD3-201ENST00000223127 MAP2P11137 1827 aaKnown RBP16.79■□□□□ 0.28
PLOD3-201ENST00000223127 FRAT2O75474 233 aaPredicted RBP16.78■□□□□ 0.28
PLOD3-201ENST00000223127 RIPK4P57078 832 aa16.78■□□□□ 0.28
PLOD3-201ENST00000223127 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
PLOD3-201ENST00000223127 PIK3R4Q99570 1358 aa16.78■□□□□ 0.28
PLOD3-201ENST00000223127 C14orf37Q86TY3 774 aa16.78■□□□□ 0.28
PLOD3-201ENST00000223127 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
PLOD3-201ENST00000223127 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
PLOD3-201ENST00000223127 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
PLOD3-201ENST00000223127 CCDC27Q2M243 656 aa16.77■□□□□ 0.28
PLOD3-201ENST00000223127 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.27
PLOD3-201ENST00000223127 FCHSD2O94868 740 aa16.76■□□□□ 0.27
PLOD3-201ENST00000223127 IL13P35225 146 aa16.76■□□□□ 0.27
PLOD3-201ENST00000223127 TSR2Q969E8 191 aaKnown RBP16.76■□□□□ 0.27
PLOD3-201ENST00000223127 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms