RNA–Protein interactions for RNA: ENST00000221954.6

CEACAM4-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEACAM4, Length 1,205 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4-201ENST00000221954 ABCA3Q99758 1704 aa29.51■■■□□ 2.31
CEACAM4-201ENST00000221954 USP21Q9UK80 565 aa29.49■■■□□ 2.31
CEACAM4-201ENST00000221954 SLC24A1O60721 1099 aa29.48■■■□□ 2.31
CEACAM4-201ENST00000221954 FNBP4Q8N3X1 1017 aaPredicted RBP29.48■■■□□ 2.31
CEACAM4-201ENST00000221954 ST20-MTHFSA0A0A6YYL1 179 aa29.47■■■□□ 2.31
CEACAM4-201ENST00000221954 RXRBP28702 533 aa29.47■■■□□ 2.31
CEACAM4-201ENST00000221954 QTRT2Q9H974 415 aaKnown RBP29.47■■■□□ 2.31
CEACAM4-201ENST00000221954 BRD4O60885 1362 aaPredicted RBP29.46■■■□□ 2.31
CEACAM4-201ENST00000221954 USP47Q96K76 1375 aa29.45■■■□□ 2.31
CEACAM4-201ENST00000221954 ABTB2Q8N961 1025 aa29.42■■■□□ 2.3
CEACAM4-201ENST00000221954 TRPC5Q9UL62 973 aaPredicted RBP29.42■■■□□ 2.3
CEACAM4-201ENST00000221954 USP6P35125 1406 aa29.42■■■□□ 2.3
CEACAM4-201ENST00000221954 ZNF692Q9BU19 519 aaPredicted RBP29.41■■■□□ 2.3
CEACAM4-201ENST00000221954 NUTM2GQ5VZR2 741 aa29.4■■■□□ 2.3
CEACAM4-201ENST00000221954 RBM6P78332 1123 aaKnown RBP29.39■■■□□ 2.3
CEACAM4-201ENST00000221954 TESK2Q96S53 571 aa29.39■■■□□ 2.3
CEACAM4-201ENST00000221954 CRYBG1Q9Y4K1 1723 aa29.39■■■□□ 2.3
CEACAM4-201ENST00000221954 BCL9LQ86UU0 1499 aa29.38■■■□□ 2.29
CEACAM4-201ENST00000221954 TMC1Q8TDI8 760 aa29.38■■■□□ 2.29
CEACAM4-201ENST00000221954 PUS7Q96PZ0 661 aaKnown RBP29.38■■■□□ 2.29
CEACAM4-201ENST00000221954 AKAP12Q02952 1782 aa29.37■■■□□ 2.29
CEACAM4-201ENST00000221954 SLIT2O94813 1529 aa29.37■■■□□ 2.29
CEACAM4-201ENST00000221954 NLRP13Q86W25 1043 aa29.36■■■□□ 2.29
CEACAM4-201ENST00000221954 PLCH1Q4KWH8 1693 aa29.36■■■□□ 2.29
CEACAM4-201ENST00000221954 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.36■■■□□ 2.29
CEACAM4-201ENST00000221954 CDK12Q9NYV4 1490 aaPredicted RBP29.36■■■□□ 2.29
CEACAM4-201ENST00000221954 PHRF1Q9P1Y6 1649 aaKnown RBP29.35■■■□□ 2.29
CEACAM4-201ENST00000221954 UNC5CLQ8IV45 518 aa29.35■■■□□ 2.29
CEACAM4-201ENST00000221954 KTN1Q86UP2 1357 aaKnown RBP29.35■■■□□ 2.29
CEACAM4-201ENST00000221954 ATRNO75882 1429 aa29.35■■■□□ 2.29
CEACAM4-201ENST00000221954 NWD2Q9ULI1 1742 aa29.34■■■□□ 2.29
CEACAM4-201ENST00000221954 TMF1P82094 1093 aa29.34■■■□□ 2.29
CEACAM4-201ENST00000221954 FAM83GA6ND36 823 aa29.33■■■□□ 2.29
CEACAM4-201ENST00000221954 CPSF1Q10570 1443 aaKnown RBP29.33■■■□□ 2.29
CEACAM4-201ENST00000221954 COL14A1Q05707 1796 aaKnown RBP29.32■■■□□ 2.28
CEACAM4-201ENST00000221954 PRDM11Q9NQV5 511 aa29.32■■■□□ 2.28
CEACAM4-201ENST00000221954 HDGFL2Q7Z4V5 671 aaPredicted RBP29.31■■■□□ 2.28
CEACAM4-201ENST00000221954 SSH2Q76I76 1423 aa29.3■■■□□ 2.28
CEACAM4-201ENST00000221954 NLRP6P59044 892 aa29.3■■■□□ 2.28
CEACAM4-201ENST00000221954 TERF2IPQ9NYB0 399 aa29.3■■■□□ 2.28
CEACAM4-201ENST00000221954 NINLQ9Y2I6 1382 aa29.29■■■□□ 2.28
CEACAM4-201ENST00000221954 MON2Q7Z3U7 1717 aa29.29■■■□□ 2.28
CEACAM4-201ENST00000221954 TTC21BQ7Z4L5 1316 aa29.29■■■□□ 2.28
CEACAM4-201ENST00000221954 TTC21AQ8NDW8 1320 aa29.29■■■□□ 2.28
CEACAM4-201ENST00000221954 SLC12A5Q9H2X9 1139 aa29.29■■■□□ 2.28
CEACAM4-201ENST00000221954 USP19O94966 1318 aa29.28■■■□□ 2.28
CEACAM4-201ENST00000221954 CDCA8Q53HL2 280 aa29.28■■■□□ 2.28
CEACAM4-201ENST00000221954 KIAA0232Q92628 1395 aa29.27■■■□□ 2.28
CEACAM4-201ENST00000221954 ZC3H6P61129 1189 aaKnown RBP29.27■■■□□ 2.28
CEACAM4-201ENST00000221954 GJD4Q96KN9 370 aaPredicted RBP29.27■■■□□ 2.28
CEACAM4-201ENST00000221954 BTG4Q9NY30 223 aa29.27■■■□□ 2.28
CEACAM4-201ENST00000221954 PIK3C2AO00443 1686 aa29.27■■■□□ 2.28
CEACAM4-201ENST00000221954 NRKQ7Z2Y5 1582 aa29.26■■■□□ 2.28
CEACAM4-201ENST00000221954 CCDC9Q9Y3X0 531 aaKnown RBP29.25■■■□□ 2.27
CEACAM4-201ENST00000221954 RGS12O14924 1447 aa29.25■■■□□ 2.27
CEACAM4-201ENST00000221954 CD163L1Q9NR16 1453 aa29.24■■■□□ 2.27
CEACAM4-201ENST00000221954 GCP02774 474 aa29.24■■■□□ 2.27
CEACAM4-201ENST00000221954 VPS72Q15906 364 aa29.23■■■□□ 2.27
CEACAM4-201ENST00000221954 EIF4G2P78344 907 aaKnown RBP eCLIP29.22■■■□□ 2.27
CEACAM4-201ENST00000221954 NRAPQ86VF7 1730 aa29.21■■■□□ 2.27
CEACAM4-201ENST00000221954 CHRNA2Q15822 529 aa29.21■■■□□ 2.27
CEACAM4-201ENST00000221954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.21■■■□□ 2.27
CEACAM4-201ENST00000221954 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.27
CEACAM4-201ENST00000221954 A0A1W2PP64 1363 aa29.2■■■□□ 2.26
CEACAM4-201ENST00000221954 CPDO75976 1380 aa29.2■■■□□ 2.26
CEACAM4-201ENST00000221954 SLIT3O75094 1523 aa29.2■■■□□ 2.26
CEACAM4-201ENST00000221954 GLI3P10071 1580 aa29.18■■■□□ 2.26
CEACAM4-201ENST00000221954 KCNH5Q8NCM2 988 aa29.16■■■□□ 2.26
CEACAM4-201ENST00000221954 ZBTB7CA1YPR0 619 aa29.15■■■□□ 2.26
CEACAM4-201ENST00000221954 ANKRD36BQ8N2N9 1353 aa29.13■■■□□ 2.25
CEACAM4-201ENST00000221954 HSPA5P11021 654 aaKnown RBP29.13■■■□□ 2.25
CEACAM4-201ENST00000221954 EVA1CP58658 441 aa29.13■■■□□ 2.25
CEACAM4-201ENST00000221954 STRN4Q9NRL3 753 aa29.13■■■□□ 2.25
CEACAM4-201ENST00000221954 NME9Q86XW9 330 aa29.12■■■□□ 2.25
CEACAM4-201ENST00000221954 SOX12O15370 315 aa29.11■■■□□ 2.25
CEACAM4-201ENST00000221954 USP31Q70CQ4 1352 aa29.11■■■□□ 2.25
CEACAM4-201ENST00000221954 USP54Q70EL1 1684 aa29.09■■■□□ 2.25
CEACAM4-201ENST00000221954 LMO7Q8WWI1 1683 aa29.09■■■□□ 2.25
CEACAM4-201ENST00000221954 CAMTA1Q9Y6Y1 1673 aa29.09■■■□□ 2.25
CEACAM4-201ENST00000221954 A0A0G2JS52 829 aa29.08■■■□□ 2.25
CEACAM4-201ENST00000221954 MYT1Q01538 1121 aa29.08■■■□□ 2.25
CEACAM4-201ENST00000221954 ZRANB1Q9UGI0 708 aa29.08■■■□□ 2.25
CEACAM4-201ENST00000221954 SPATA31A5Q5VU36 1347 aa29.08■■■□□ 2.25
CEACAM4-201ENST00000221954 SPATA31A7Q8IWB4 1347 aa29.08■■■□□ 2.25
CEACAM4-201ENST00000221954 AATKQ6ZMQ8 1374 aa29.08■■■□□ 2.25
CEACAM4-201ENST00000221954 SEPT12Q8IYM1 358 aa29.06■■■□□ 2.24
CEACAM4-201ENST00000221954 POLR3GLQ9BT43 218 aa29.06■■■□□ 2.24
CEACAM4-201ENST00000221954 FAM98CQ17RN3 349 aaKnown RBP29.05■■■□□ 2.24
CEACAM4-201ENST00000221954 NFAT5O94916 1531 aa29.04■■■□□ 2.24
CEACAM4-201ENST00000221954 ONECUT3O60422 494 aaPredicted RBP29.04■■■□□ 2.24
CEACAM4-201ENST00000221954 ARHGEF25Q86VW2 580 aa29.04■■■□□ 2.24
CEACAM4-201ENST00000221954 MYOM1P52179 1685 aa29.04■■■□□ 2.24
CEACAM4-201ENST00000221954 SPATA31A1Q5TZJ5 1347 aa29.02■■■□□ 2.24
CEACAM4-201ENST00000221954 UPF1Q92900 1129 aaKnown RBP eCLIP29.02■■■□□ 2.24
CEACAM4-201ENST00000221954 COL5A2P05997 1499 aaPredicted RBP29.02■■■□□ 2.24
CEACAM4-201ENST00000221954 COG3Q96JB2 828 aa29.01■■■□□ 2.23
CEACAM4-201ENST00000221954 OVOS2A0A0J9YW53 1432 aa29.01■■■□□ 2.23
CEACAM4-201ENST00000221954 OVOS2Q6IE36 1432 aa29.01■■■□□ 2.23
CEACAM4-201ENST00000221954 LARP1Q6PKG0 1096 aaKnown RBP29■■■□□ 2.23
CEACAM4-201ENST00000221954 BRWD3Q6RI45 1802 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms