RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 WAPLQ7Z5K2 1190 aa20.44■□□□□ 0.86
SF3A2-201ENST00000221494 SIRT1Q96EB6 747 aa20.43■□□□□ 0.86
SF3A2-201ENST00000221494 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
SF3A2-201ENST00000221494 MINK1Q8N4C8 1332 aaPredicted RBP20.43■□□□□ 0.86
SF3A2-201ENST00000221494 TECPR2O15040 1411 aa20.42■□□□□ 0.86
SF3A2-201ENST00000221494 SLC4A3P48751 1232 aa20.41■□□□□ 0.86
SF3A2-201ENST00000221494 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
SF3A2-201ENST00000221494 FRAT2O75474 233 aaPredicted RBP20.41■□□□□ 0.86
SF3A2-201ENST00000221494 SLC12A5Q9H2X9 1139 aa20.41■□□□□ 0.86
SF3A2-201ENST00000221494 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
SF3A2-201ENST00000221494 CARD14Q9BXL6 1004 aa20.4■□□□□ 0.86
SF3A2-201ENST00000221494 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
SF3A2-201ENST00000221494 USP19O94966 1318 aa20.39■□□□□ 0.86
SF3A2-201ENST00000221494 FAM135BQ49AJ0 1406 aa20.39■□□□□ 0.85
SF3A2-201ENST00000221494 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
SF3A2-201ENST00000221494 RGS3P49796 1198 aa20.38■□□□□ 0.85
SF3A2-201ENST00000221494 SRPK2P78362 688 aaKnown RBP20.37■□□□□ 0.85
SF3A2-201ENST00000221494 L1TD1Q5T7N2 865 aaKnown RBP20.37■□□□□ 0.85
SF3A2-201ENST00000221494 CLUAP1Q96AJ1 413 aa20.37■□□□□ 0.85
SF3A2-201ENST00000221494 ANKLE2Q86XL3 938 aa20.36■□□□□ 0.85
SF3A2-201ENST00000221494 PMFBP1Q8TBY8 1022 aa20.36■□□□□ 0.85
SF3A2-201ENST00000221494 CDK19Q9BWU1 502 aa20.36■□□□□ 0.85
SF3A2-201ENST00000221494 USP32Q8NFA0 1604 aa20.36■□□□□ 0.85
SF3A2-201ENST00000221494 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
SF3A2-201ENST00000221494 ZNF142P52746 1687 aaPredicted RBP20.35■□□□□ 0.85
SF3A2-201ENST00000221494 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
SF3A2-201ENST00000221494 SETD1BQ9UPS6 1966 aaKnown RBP20.35■□□□□ 0.85
SF3A2-201ENST00000221494 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
SF3A2-201ENST00000221494 APAF1O14727 1248 aa20.34■□□□□ 0.85
SF3A2-201ENST00000221494 CPS1P31327 1500 aa20.34■□□□□ 0.85
SF3A2-201ENST00000221494 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.84
SF3A2-201ENST00000221494 UPF2Q9HAU5 1272 aaKnown RBP20.32■□□□□ 0.84
SF3A2-201ENST00000221494 AMOTL2Q9Y2J4 779 aa20.32■□□□□ 0.84
SF3A2-201ENST00000221494 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
SF3A2-201ENST00000221494 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
SF3A2-201ENST00000221494 WASLO00401 505 aaPredicted RBP20.3■□□□□ 0.84
SF3A2-201ENST00000221494 BCAR3O75815 825 aa20.3■□□□□ 0.84
SF3A2-201ENST00000221494 IGHDP01880 384 aa20.3■□□□□ 0.84
SF3A2-201ENST00000221494 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
SF3A2-201ENST00000221494 ANKRD36BQ8N2N9 1353 aa20.3■□□□□ 0.84
SF3A2-201ENST00000221494 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
SF3A2-201ENST00000221494 NSD3Q9BZ95 1437 aa20.28■□□□□ 0.84
SF3A2-201ENST00000221494 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
SF3A2-201ENST00000221494 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
SF3A2-201ENST00000221494 CCDC146Q8IYE0 955 aa20.27■□□□□ 0.84
SF3A2-201ENST00000221494 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
SF3A2-201ENST00000221494 TBC1D32Q96NH3 1257 aa20.26■□□□□ 0.83
SF3A2-201ENST00000221494 WDR63Q8IWG1 891 aa20.26■□□□□ 0.83
SF3A2-201ENST00000221494 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
SF3A2-201ENST00000221494 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
SF3A2-201ENST00000221494 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
SF3A2-201ENST00000221494 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
SF3A2-201ENST00000221494 A0A1W2PP64 1363 aa20.25■□□□□ 0.83
SF3A2-201ENST00000221494 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
SF3A2-201ENST00000221494 CANXP27824 592 aaKnown RBP20.25■□□□□ 0.83
SF3A2-201ENST00000221494 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
SF3A2-201ENST00000221494 TERF2IPQ9NYB0 399 aa20.23■□□□□ 0.83
SF3A2-201ENST00000221494 KCNA6P17658 529 aa20.23■□□□□ 0.83
SF3A2-201ENST00000221494 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.22■□□□□ 0.83
SF3A2-201ENST00000221494 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
SF3A2-201ENST00000221494 NUDT16Q96DE0 195 aaKnown RBP20.21■□□□□ 0.83
SF3A2-201ENST00000221494 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-201ENST00000221494 NCKAP5LQ9HCH0 1330 aa20.21■□□□□ 0.83
SF3A2-201ENST00000221494 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-201ENST00000221494 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
SF3A2-201ENST00000221494 RWDD1Q9H446 243 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-201ENST00000221494 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.19■□□□□ 0.82
SF3A2-201ENST00000221494 COG6Q9Y2V7 657 aa20.19■□□□□ 0.82
SF3A2-201ENST00000221494 CCDC61Q9Y6R9 512 aa20.19■□□□□ 0.82
SF3A2-201ENST00000221494 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
SF3A2-201ENST00000221494 ADGRB2O60241 1585 aa20.19■□□□□ 0.82
SF3A2-201ENST00000221494 HDGFL2Q7Z4V5 671 aaPredicted RBP20.19■□□□□ 0.82
SF3A2-201ENST00000221494 PRR36Q9H6K5 1346 aa20.18■□□□□ 0.82
SF3A2-201ENST00000221494 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
SF3A2-201ENST00000221494 SEC24BO95487 1268 aa20.17■□□□□ 0.82
SF3A2-201ENST00000221494 PANK1Q8TE04 598 aa20.17■□□□□ 0.82
SF3A2-201ENST00000221494 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
SF3A2-201ENST00000221494 PPIP5K1Q6PFW1 1433 aa20.16■□□□□ 0.82
SF3A2-201ENST00000221494 ATP7BP35670 1465 aa20.16■□□□□ 0.82
SF3A2-201ENST00000221494 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
SF3A2-201ENST00000221494 NSD2O96028 1365 aa20.16■□□□□ 0.82
SF3A2-201ENST00000221494 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
SF3A2-201ENST00000221494 TBC1D2Q9BYX2 928 aa20.15■□□□□ 0.82
SF3A2-201ENST00000221494 CPSF1Q10570 1443 aaKnown RBP20.15■□□□□ 0.82
SF3A2-201ENST00000221494 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
SF3A2-201ENST00000221494 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.81
SF3A2-201ENST00000221494 FYB1O15117 783 aa20.14■□□□□ 0.81
SF3A2-201ENST00000221494 KLHL34Q8N239 644 aa20.14■□□□□ 0.81
SF3A2-201ENST00000221494 CHMP5Q9NZZ3 219 aa20.12■□□□□ 0.81
SF3A2-201ENST00000221494 PCDHB15Q9Y5E8 787 aa20.12■□□□□ 0.81
SF3A2-201ENST00000221494 GOLGA6L3A6NEY3 463 aa20.11■□□□□ 0.81
SF3A2-201ENST00000221494 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
SF3A2-201ENST00000221494 SLKQ9H2G2 1235 aaPredicted RBP20.11■□□□□ 0.81
SF3A2-201ENST00000221494 PLEKHG3A1L390 1219 aa20.1■□□□□ 0.81
SF3A2-201ENST00000221494 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
SF3A2-201ENST00000221494 MCM4P33991 863 aa20.1■□□□□ 0.81
SF3A2-201ENST00000221494 GGNBP2Q9H3C7 697 aa20.1■□□□□ 0.81
SF3A2-201ENST00000221494 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
SF3A2-201ENST00000221494 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
SF3A2-201ENST00000221494 HSPA2P54652 639 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms