RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
PAF1-201ENST00000221265 MTHFSP49914 203 aa20.25■□□□□ 0.83
PAF1-201ENST00000221265 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
PAF1-201ENST00000221265 USP6P35125 1406 aa20.24■□□□□ 0.83
PAF1-201ENST00000221265 FBLN1P23142 703 aa20.23■□□□□ 0.83
PAF1-201ENST00000221265 POLR3AO14802 1390 aaPredicted RBP20.22■□□□□ 0.83
PAF1-201ENST00000221265 SHPRHQ149N8 1683 aa20.22■□□□□ 0.83
PAF1-201ENST00000221265 NGDNQ8NEJ9 315 aaKnown RBP20.22■□□□□ 0.83
PAF1-201ENST00000221265 TTC21BQ7Z4L5 1316 aa20.22■□□□□ 0.83
PAF1-201ENST00000221265 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
PAF1-201ENST00000221265 WDR43Q15061 677 aaKnown RBP eCLIP20.2■□□□□ 0.82
PAF1-201ENST00000221265 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
PAF1-201ENST00000221265 SSH2Q76I76 1423 aa20.2■□□□□ 0.82
PAF1-201ENST00000221265 TMEM94Q12767 1356 aa20.19■□□□□ 0.82
PAF1-201ENST00000221265 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
PAF1-201ENST00000221265 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
PAF1-201ENST00000221265 PHF8Q9UPP1 1060 aa20.16■□□□□ 0.82
PAF1-201ENST00000221265 SALL2Q9Y467 1007 aaPredicted RBP20.16■□□□□ 0.82
PAF1-201ENST00000221265 ESCO1Q5FWF5 840 aa20.15■□□□□ 0.82
PAF1-201ENST00000221265 COG3Q96JB2 828 aa20.15■□□□□ 0.82
PAF1-201ENST00000221265 ORAI2Q96SN7 254 aa20.15■□□□□ 0.82
PAF1-201ENST00000221265 C19orf44Q9H6X5 657 aa20.15■□□□□ 0.82
PAF1-201ENST00000221265 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.82
PAF1-201ENST00000221265 INSRP06213 1382 aa20.14■□□□□ 0.81
PAF1-201ENST00000221265 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
PAF1-201ENST00000221265 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
PAF1-201ENST00000221265 POLKQ9UBT6 870 aa20.14■□□□□ 0.81
PAF1-201ENST00000221265 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.81
PAF1-201ENST00000221265 OVOS2A0A0J9YW53 1432 aa20.13■□□□□ 0.81
PAF1-201ENST00000221265 OVOS2Q6IE36 1432 aa20.13■□□□□ 0.81
PAF1-201ENST00000221265 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
PAF1-201ENST00000221265 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
PAF1-201ENST00000221265 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
PAF1-201ENST00000221265 ERICH6BQ5W0A0 696 aa20.11■□□□□ 0.81
PAF1-201ENST00000221265 RRS1Q15050 365 aaKnown RBP20.11■□□□□ 0.81
PAF1-201ENST00000221265 TTC21AQ8NDW8 1320 aa20.1■□□□□ 0.81
PAF1-201ENST00000221265 MARF1Q9Y4F3 1742 aaKnown RBP20.1■□□□□ 0.81
PAF1-201ENST00000221265 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
PAF1-201ENST00000221265 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.81
PAF1-201ENST00000221265 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
PAF1-201ENST00000221265 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.81
PAF1-201ENST00000221265 NUTM2GQ5VZR2 741 aa20.08■□□□□ 0.81
PAF1-201ENST00000221265 SOX12O15370 315 aa20.07■□□□□ 0.8
PAF1-201ENST00000221265 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
PAF1-201ENST00000221265 ATF3P18847 181 aa20.07■□□□□ 0.8
PAF1-201ENST00000221265 MST1RQ04912 1400 aa20.07■□□□□ 0.8
PAF1-201ENST00000221265 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
PAF1-201ENST00000221265 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
PAF1-201ENST00000221265 FOXO3O43524 673 aa20.07■□□□□ 0.8
PAF1-201ENST00000221265 XPCQ01831 940 aaPredicted RBP20.07■□□□□ 0.8
PAF1-201ENST00000221265 DCCP43146 1447 aa20.05■□□□□ 0.8
PAF1-201ENST00000221265 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
PAF1-201ENST00000221265 PSME1Q06323 249 aa20.05■□□□□ 0.8
PAF1-201ENST00000221265 APAF1O14727 1248 aa20.04■□□□□ 0.8
PAF1-201ENST00000221265 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
PAF1-201ENST00000221265 NLRP6P59044 892 aa20.04■□□□□ 0.8
PAF1-201ENST00000221265 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
PAF1-201ENST00000221265 PEAK1Q9H792 1746 aa20.04■□□□□ 0.8
PAF1-201ENST00000221265 U2SURPO15042 1029 aaKnown RBP20.04■□□□□ 0.8
PAF1-201ENST00000221265 ABTB2Q8N961 1025 aa20.04■□□□□ 0.8
PAF1-201ENST00000221265 MSH6P52701 1360 aa20.03■□□□□ 0.8
PAF1-201ENST00000221265 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
PAF1-201ENST00000221265 PPP4R2Q9NY27 417 aa20.03■□□□□ 0.8
PAF1-201ENST00000221265 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
PAF1-201ENST00000221265 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
PAF1-201ENST00000221265 KIF1AQ12756 1690 aa20.02■□□□□ 0.8
PAF1-201ENST00000221265 USP54Q70EL1 1684 aa20.02■□□□□ 0.8
PAF1-201ENST00000221265 CADPS2Q86UW7 1296 aa20.01■□□□□ 0.79
PAF1-201ENST00000221265 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
PAF1-201ENST00000221265 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
PAF1-201ENST00000221265 CDCA7LQ96GN5 454 aa20■□□□□ 0.79
PAF1-201ENST00000221265 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
PAF1-201ENST00000221265 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
PAF1-201ENST00000221265 MAP3K19Q56UN5 1328 aa19.98■□□□□ 0.79
PAF1-201ENST00000221265 IL13P35225 146 aa19.97■□□□□ 0.79
PAF1-201ENST00000221265 KRT28Q7Z3Y7 464 aa19.97■□□□□ 0.79
PAF1-201ENST00000221265 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
PAF1-201ENST00000221265 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
PAF1-201ENST00000221265 IQSEC2Q5JU85 1478 aa19.97■□□□□ 0.79
PAF1-201ENST00000221265 ZNF521Q96K83 1311 aa19.96■□□□□ 0.79
PAF1-201ENST00000221265 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
PAF1-201ENST00000221265 TCP11L2Q8N4U5 519 aa19.96■□□□□ 0.79
PAF1-201ENST00000221265 RNF123Q5XPI4 1314 aa19.96■□□□□ 0.79
PAF1-201ENST00000221265 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
PAF1-201ENST00000221265 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
PAF1-201ENST00000221265 PLEKHF1Q96S99 279 aa19.95■□□□□ 0.78
PAF1-201ENST00000221265 LTN1O94822 1766 aa19.94■□□□□ 0.78
PAF1-201ENST00000221265 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
PAF1-201ENST00000221265 HMOX1P09601 288 aa19.93■□□□□ 0.78
PAF1-201ENST00000221265 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
PAF1-201ENST00000221265 EIF4A2Q14240 407 aaKnown RBP19.93■□□□□ 0.78
PAF1-201ENST00000221265 ALS2Q96Q42 1657 aa19.92■□□□□ 0.78
PAF1-201ENST00000221265 BRINP3Q76B58 766 aa19.91■□□□□ 0.78
PAF1-201ENST00000221265 NFAT5O94916 1531 aa19.91■□□□□ 0.78
PAF1-201ENST00000221265 B4GALNT3Q6L9W6 998 aa19.91■□□□□ 0.78
PAF1-201ENST00000221265 RSPH6AQ9H0K4 717 aa19.91■□□□□ 0.78
PAF1-201ENST00000221265 SLAIN2Q9P270 581 aa19.91■□□□□ 0.78
PAF1-201ENST00000221265 SBNO1A3KN83 1393 aa19.91■□□□□ 0.78
PAF1-201ENST00000221265 FLT4P35916 1363 aa19.9■□□□□ 0.78
PAF1-201ENST00000221265 AMPHP49418 695 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms