RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
EXTL3-201ENST00000220562 NEK4P51957 841 aa21.4■■□□□ 1.02
EXTL3-201ENST00000220562 SART3Q15020 963 aaKnown RBP21.4■■□□□ 1.02
EXTL3-201ENST00000220562 TSPY26PQ9H489 355 aa21.4■■□□□ 1.02
EXTL3-201ENST00000220562 CASKIN1Q8WXD9 1431 aa21.39■■□□□ 1.02
EXTL3-201ENST00000220562 SMC2O95347 1197 aa21.39■■□□□ 1.02
EXTL3-201ENST00000220562 IKQ13123 557 aaPredicted RBP21.39■■□□□ 1.01
EXTL3-201ENST00000220562 GPRASP1Q5JY77 1395 aa21.39■■□□□ 1.01
EXTL3-201ENST00000220562 PRPF40AO75400 957 aaKnown RBP21.39■■□□□ 1.01
EXTL3-201ENST00000220562 TTC39AQ5SRH9 613 aa21.39■■□□□ 1.01
EXTL3-201ENST00000220562 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
EXTL3-201ENST00000220562 ESCO1Q5FWF5 840 aa21.38■■□□□ 1.01
EXTL3-201ENST00000220562 HIP1O00291 1037 aa21.38■■□□□ 1.01
EXTL3-201ENST00000220562 CDR1P51861 262 aa21.38■■□□□ 1.01
EXTL3-201ENST00000220562 TRIM5Q9C035 493 aa21.38■■□□□ 1.01
EXTL3-201ENST00000220562 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
EXTL3-201ENST00000220562 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
EXTL3-201ENST00000220562 GNAI2P04899 355 aa21.38■■□□□ 1.01
EXTL3-201ENST00000220562 TSR2Q969E8 191 aaKnown RBP21.38■■□□□ 1.01
EXTL3-201ENST00000220562 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
EXTL3-201ENST00000220562 OFD1O75665 1012 aa21.37■■□□□ 1.01
EXTL3-201ENST00000220562 ATP2B1P20020 1258 aa21.37■■□□□ 1.01
EXTL3-201ENST00000220562 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
EXTL3-201ENST00000220562 RRP12Q5JTH9 1297 aaKnown RBP21.37■■□□□ 1.01
EXTL3-201ENST00000220562 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
EXTL3-201ENST00000220562 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
EXTL3-201ENST00000220562 ERC1Q8IUD2 1116 aa21.36■■□□□ 1.01
EXTL3-201ENST00000220562 CEBPZQ03701 1054 aaKnown RBP21.36■■□□□ 1.01
EXTL3-201ENST00000220562 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
EXTL3-201ENST00000220562 BCAR3O75815 825 aa21.35■■□□□ 1.01
EXTL3-201ENST00000220562 HSP90B2PQ58FF3 399 aa21.35■■□□□ 1.01
EXTL3-201ENST00000220562 RABEP1Q15276 862 aa21.35■■□□□ 1.01
EXTL3-201ENST00000220562 ZFYVE27Q5T4F4 411 aa21.35■■□□□ 1.01
EXTL3-201ENST00000220562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.34■■□□□ 1.012e-6■■■■■ 96.1
EXTL3-201ENST00000220562 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
EXTL3-201ENST00000220562 SLC4A2P04920 1241 aa21.34■■□□□ 1.01
EXTL3-201ENST00000220562 ZNF396Q96N95 335 aaPredicted RBP21.34■■□□□ 1.01
EXTL3-201ENST00000220562 SCAPERQ9BY12 1400 aa21.33■■□□□ 1.01
EXTL3-201ENST00000220562 MCM2P49736 904 aa21.33■■□□□ 1.01
EXTL3-201ENST00000220562 ZNF428Q96B54 188 aa21.33■■□□□ 1.01
EXTL3-201ENST00000220562 CNNM1Q9NRU3 951 aa21.33■■□□□ 1
EXTL3-201ENST00000220562 MBD3O95983 291 aa21.33■■□□□ 1
EXTL3-201ENST00000220562 CDK5RAP3Q96JB5 506 aa21.33■■□□□ 1
EXTL3-201ENST00000220562 CCDC158Q5M9N0 1113 aa21.32■■□□□ 1
EXTL3-201ENST00000220562 FMNL2Q96PY5 1086 aa21.32■■□□□ 1
EXTL3-201ENST00000220562 FIBPO43427 364 aa21.32■■□□□ 1
EXTL3-201ENST00000220562 SLC3A2P08195 630 aaKnown RBP21.32■■□□□ 1
EXTL3-201ENST00000220562 AFAP1Q8N556 730 aa21.32■■□□□ 1
EXTL3-201ENST00000220562 STK3Q13188 491 aa21.32■■□□□ 1
EXTL3-201ENST00000220562 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
EXTL3-201ENST00000220562 MAGEC2Q9UBF1 373 aaPredicted RBP21.31■■□□□ 1
EXTL3-201ENST00000220562 BRPF1P55201 1214 aaPredicted RBP21.31■■□□□ 1
EXTL3-201ENST00000220562 CCDC173Q0VFZ6 552 aa21.31■■□□□ 1
EXTL3-201ENST00000220562 AKNAQ7Z591 1439 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 CDK19Q9BWU1 502 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 STK11IPQ8N1F8 1099 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 SIL1Q9H173 461 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 FILIP1LQ4L180 1135 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 SMARCE1Q969G3 411 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 STRN4Q9NRL3 753 aa21.3■■□□□ 1
EXTL3-201ENST00000220562 PDCP20941 246 aa21.29■■□□□ 1
EXTL3-201ENST00000220562 PDE3AQ14432 1141 aa21.29■■□□□ 1
EXTL3-201ENST00000220562 STK38Q15208 465 aa21.29■■□□□ 1
EXTL3-201ENST00000220562 LRRCC1Q9C099 1032 aa21.29■■□□□ 1
EXTL3-201ENST00000220562 SPC24Q8NBT2 197 aa21.29■■□□□ 1
EXTL3-201ENST00000220562 CFTRP13569 1480 aa21.28■■□□□ 1
EXTL3-201ENST00000220562 NOM1Q5C9Z4 860 aaKnown RBP21.28■■□□□ 1
EXTL3-201ENST00000220562 TXLNAP40222 546 aa21.28■■□□□ 1
EXTL3-201ENST00000220562 SKIDA1Q1XH10 827 aa21.28■■□□□ 1
EXTL3-201ENST00000220562 HDGFL1Q5TGJ6 251 aa21.28■■□□□ 1
EXTL3-201ENST00000220562 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
EXTL3-201ENST00000220562 TATP17735 454 aaPredicted RBP21.28■■□□□ 1
EXTL3-201ENST00000220562 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
EXTL3-201ENST00000220562 CYP46A1Q9Y6A2 500 aa21.28■■□□□ 1
EXTL3-201ENST00000220562 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.27■■□□□ 1
EXTL3-201ENST00000220562 ERCC4Q92889 916 aaPredicted RBP21.26■□□□□ 0.99
EXTL3-201ENST00000220562 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
EXTL3-201ENST00000220562 CABP4P57796 275 aa21.26■□□□□ 0.99
EXTL3-201ENST00000220562 TMEM132AQ24JP5 1023 aa21.26■□□□□ 0.99
EXTL3-201ENST00000220562 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
EXTL3-201ENST00000220562 CCP110O43303 1012 aa21.25■□□□□ 0.99
EXTL3-201ENST00000220562 KRT18P05783 430 aaKnown RBP21.25■□□□□ 0.99
EXTL3-201ENST00000220562 CABP1Q9NZU7 370 aa21.25■□□□□ 0.99
EXTL3-201ENST00000220562 GNL3LQ9NVN8 582 aaKnown RBP21.24■□□□□ 0.99
EXTL3-201ENST00000220562 MYL6BP14649 208 aa21.24■□□□□ 0.99
EXTL3-201ENST00000220562 AEBP1Q8IUX7 1158 aa21.24■□□□□ 0.99
EXTL3-201ENST00000220562 CCAR1Q8IX12 1150 aaKnown RBP21.24■□□□□ 0.99
EXTL3-201ENST00000220562 KRI1Q8N9T8 703 aaKnown RBP21.23■□□□□ 0.99
EXTL3-201ENST00000220562 MYO6Q9UM54 1294 aa21.23■□□□□ 0.99
EXTL3-201ENST00000220562 K7ELQ4 463 aaPredicted RBP21.23■□□□□ 0.99
EXTL3-201ENST00000220562 PROSER2Q86WR7 435 aaPredicted RBP21.23■□□□□ 0.99
EXTL3-201ENST00000220562 KIAA1107Q9UPP5 1409 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 CCDC69A6NI79 296 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 C9orf84Q5VXU9 1444 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 ERBINQ96RT1 1412 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 SERPINC1P01008 464 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 ANKRD1Q15327 319 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 EHBP1L1Q8N3D4 1523 aa21.22■□□□□ 0.99
EXTL3-201ENST00000220562 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms