RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
VPS18-201ENST00000220509 HDAC5Q9UQL6 1122 aa13.16□□□□□ -0.3
VPS18-201ENST00000220509 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
VPS18-201ENST00000220509 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
VPS18-201ENST00000220509 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
VPS18-201ENST00000220509 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
VPS18-201ENST00000220509 PANK2Q9BZ23 570 aa13.15□□□□□ -0.3
VPS18-201ENST00000220509 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
VPS18-201ENST00000220509 AMPHP49418 695 aa13.14□□□□□ -0.31
VPS18-201ENST00000220509 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
VPS18-201ENST00000220509 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
VPS18-201ENST00000220509 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
VPS18-201ENST00000220509 PTMSP20962 102 aa13.14□□□□□ -0.31
VPS18-201ENST00000220509 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
VPS18-201ENST00000220509 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
VPS18-201ENST00000220509 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS18-201ENST00000220509 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
VPS18-201ENST00000220509 PLCD4Q9BRC7 762 aa13.13□□□□□ -0.31
VPS18-201ENST00000220509 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
VPS18-201ENST00000220509 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
VPS18-201ENST00000220509 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
VPS18-201ENST00000220509 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
VPS18-201ENST00000220509 NSD3Q9BZ95 1437 aa13.12□□□□□ -0.31
VPS18-201ENST00000220509 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
VPS18-201ENST00000220509 NEO1Q92859 1461 aa13.11□□□□□ -0.31
VPS18-201ENST00000220509 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
VPS18-201ENST00000220509 TSR2Q969E8 191 aaKnown RBP13.11□□□□□ -0.31
VPS18-201ENST00000220509 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
VPS18-201ENST00000220509 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
VPS18-201ENST00000220509 CLGNO14967 610 aa13.11□□□□□ -0.31
VPS18-201ENST00000220509 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
VPS18-201ENST00000220509 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
VPS18-201ENST00000220509 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
VPS18-201ENST00000220509 NGEFQ8N5V2 710 aa13.1□□□□□ -0.31
VPS18-201ENST00000220509 ZMYM3Q14202 1370 aa13.1□□□□□ -0.31
VPS18-201ENST00000220509 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
VPS18-201ENST00000220509 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
VPS18-201ENST00000220509 SEC24BO95487 1268 aa13.09□□□□□ -0.31
VPS18-201ENST00000220509 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
VPS18-201ENST00000220509 KDM5DQ9BY66 1539 aa13.09□□□□□ -0.31
VPS18-201ENST00000220509 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
VPS18-201ENST00000220509 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
VPS18-201ENST00000220509 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
VPS18-201ENST00000220509 LMOD3Q0VAK6 560 aa13.08□□□□□ -0.32
VPS18-201ENST00000220509 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
VPS18-201ENST00000220509 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
VPS18-201ENST00000220509 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
VPS18-201ENST00000220509 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
VPS18-201ENST00000220509 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 KDM5CP41229 1560 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 THEMISQ8N1K5 641 aaPredicted RBP13.06□□□□□ -0.32
VPS18-201ENST00000220509 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 IQGAP3Q86VI3 1631 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
VPS18-201ENST00000220509 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
VPS18-201ENST00000220509 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
VPS18-201ENST00000220509 PTPRTO14522 1441 aa13.05□□□□□ -0.32
VPS18-201ENST00000220509 ANKRD45Q5TZF3 282 aa13.05□□□□□ -0.32
VPS18-201ENST00000220509 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
VPS18-201ENST00000220509 HECW2Q9P2P5 1572 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 TRAK2O60296 914 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
VPS18-201ENST00000220509 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 NME9Q86XW9 330 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 UNC13BO14795 1591 aa13.04□□□□□ -0.32
VPS18-201ENST00000220509 TNRQ92752 1358 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 IGHDP01880 384 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
VPS18-201ENST00000220509 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 E9PCH4 1651 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 TPM2P07951 284 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 TRPM2O94759 1503 aa13.03□□□□□ -0.32
VPS18-201ENST00000220509 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.32
VPS18-201ENST00000220509 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
VPS18-201ENST00000220509 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
VPS18-201ENST00000220509 KIDINS220Q9ULH0 1771 aa13.01□□□□□ -0.33
VPS18-201ENST00000220509 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
VPS18-201ENST00000220509 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
VPS18-201ENST00000220509 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
VPS18-201ENST00000220509 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
VPS18-201ENST00000220509 MSNP26038 577 aaKnown RBP13.01□□□□□ -0.33
VPS18-201ENST00000220509 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
VPS18-201ENST00000220509 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
VPS18-201ENST00000220509 LTKP29376 864 aa13□□□□□ -0.33
VPS18-201ENST00000220509 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
VPS18-201ENST00000220509 MCM4P33991 863 aa13□□□□□ -0.33
VPS18-201ENST00000220509 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
VPS18-201ENST00000220509 ESPNB1AK53 854 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 NLRP6P59044 892 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
VPS18-201ENST00000220509 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms