RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 NGDNQ8NEJ9 315 aaKnown RBP26.53■■□□□ 1.84
PXMP4-201ENST00000217398 CDK19Q9BWU1 502 aa26.53■■□□□ 1.84
PXMP4-201ENST00000217398 PHRF1Q9P1Y6 1649 aaKnown RBP26.53■■□□□ 1.84
PXMP4-201ENST00000217398 POLR3AO14802 1390 aaPredicted RBP26.52■■□□□ 1.84
PXMP4-201ENST00000217398 SEPT12Q8IYM1 358 aa26.52■■□□□ 1.84
PXMP4-201ENST00000217398 SRCAPQ6ZRS2 3230 aa26.49■■□□□ 1.83
PXMP4-201ENST00000217398 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
PXMP4-201ENST00000217398 BTG4Q9NY30 223 aa26.48■■□□□ 1.83
PXMP4-201ENST00000217398 PLEKHG3A1L390 1219 aa26.47■■□□□ 1.83
PXMP4-201ENST00000217398 CCDC61Q9Y6R9 512 aa26.46■■□□□ 1.83
PXMP4-201ENST00000217398 ACEP12821 1306 aa26.45■■□□□ 1.83
PXMP4-201ENST00000217398 PAK3O75914 559 aaPredicted RBP26.45■■□□□ 1.82
PXMP4-201ENST00000217398 QRICH2Q9H0J4 1663 aa26.44■■□□□ 1.82
PXMP4-201ENST00000217398 THSD7AQ9UPZ6 1657 aa26.44■■□□□ 1.82
PXMP4-201ENST00000217398 NBPF8Q3BBV2 869 aa26.43■■□□□ 1.82
PXMP4-201ENST00000217398 CCDC9Q9Y3X0 531 aaKnown RBP26.43■■□□□ 1.82
PXMP4-201ENST00000217398 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
PXMP4-201ENST00000217398 SPATA31A5Q5VU36 1347 aa26.41■■□□□ 1.82
PXMP4-201ENST00000217398 SPATA31A7Q8IWB4 1347 aa26.41■■□□□ 1.82
PXMP4-201ENST00000217398 KRT27Q7Z3Y8 459 aa26.41■■□□□ 1.82
PXMP4-201ENST00000217398 L3MBTL2Q969R5 705 aa26.41■■□□□ 1.82
PXMP4-201ENST00000217398 KIAA0232Q92628 1395 aa26.41■■□□□ 1.82
PXMP4-201ENST00000217398 NRKQ7Z2Y5 1582 aa26.41■■□□□ 1.82
PXMP4-201ENST00000217398 CENPJQ9HC77 1338 aaPredicted RBP26.4■■□□□ 1.82
PXMP4-201ENST00000217398 FAM98CQ17RN3 349 aaKnown RBP26.39■■□□□ 1.82
PXMP4-201ENST00000217398 PRDM11Q9NQV5 511 aa26.38■■□□□ 1.81
PXMP4-201ENST00000217398 DEFB132Q7Z7B7 95 aa26.37■■□□□ 1.81
PXMP4-201ENST00000217398 SIN3AQ96ST3 1273 aa26.37■■□□□ 1.81
PXMP4-201ENST00000217398 LMO7Q8WWI1 1683 aa26.37■■□□□ 1.81
PXMP4-201ENST00000217398 NUTM2GQ5VZR2 741 aa26.36■■□□□ 1.81
PXMP4-201ENST00000217398 ZRANB1Q9UGI0 708 aa26.36■■□□□ 1.81
PXMP4-201ENST00000217398 PPIP5K1Q6PFW1 1433 aa26.36■■□□□ 1.81
PXMP4-201ENST00000217398 USP19O94966 1318 aa26.36■■□□□ 1.81
PXMP4-201ENST00000217398 CHRNA2Q15822 529 aa26.34■■□□□ 1.81
PXMP4-201ENST00000217398 CABP2Q9NPB3 220 aa26.34■■□□□ 1.81
PXMP4-201ENST00000217398 SPATA31A1Q5TZJ5 1347 aa26.33■■□□□ 1.81
PXMP4-201ENST00000217398 CAMTA1Q9Y6Y1 1673 aa26.32■■□□□ 1.8
PXMP4-201ENST00000217398 CPDO75976 1380 aa26.32■■□□□ 1.8
PXMP4-201ENST00000217398 ZC3H6P61129 1189 aaKnown RBP26.31■■□□□ 1.8
PXMP4-201ENST00000217398 SRPK2P78362 688 aaKnown RBP26.31■■□□□ 1.8
PXMP4-201ENST00000217398 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
PXMP4-201ENST00000217398 TNS1Q9HBL0 1735 aaKnown RBP26.3■■□□□ 1.8
PXMP4-201ENST00000217398 SSH2Q76I76 1423 aa26.3■■□□□ 1.8
PXMP4-201ENST00000217398 ABTB2Q8N961 1025 aa26.29■■□□□ 1.8
PXMP4-201ENST00000217398 BRD4O60885 1362 aaPredicted RBP26.29■■□□□ 1.8
PXMP4-201ENST00000217398 USP6P35125 1406 aa26.28■■□□□ 1.8
PXMP4-201ENST00000217398 A0A0G2JS52 829 aa26.27■■□□□ 1.8
PXMP4-201ENST00000217398 MYT1Q01538 1121 aa26.27■■□□□ 1.8
PXMP4-201ENST00000217398 PIK3C2AO00443 1686 aa26.25■■□□□ 1.79
PXMP4-201ENST00000217398 SLIT3O75094 1523 aa26.25■■□□□ 1.79
PXMP4-201ENST00000217398 SF3B2Q13435 895 aaKnown RBP26.25■■□□□ 1.79
PXMP4-201ENST00000217398 FAM182BQ5T319 152 aa26.25■■□□□ 1.79
PXMP4-201ENST00000217398 CABP1Q9NZU7 370 aa26.25■■□□□ 1.79
PXMP4-201ENST00000217398 STRN4Q9NRL3 753 aa26.24■■□□□ 1.79
PXMP4-201ENST00000217398 AKAP12Q02952 1782 aa26.24■■□□□ 1.79
PXMP4-201ENST00000217398 GCP02774 474 aa26.23■■□□□ 1.79
PXMP4-201ENST00000217398 NLRP13Q86W25 1043 aa26.23■■□□□ 1.79
PXMP4-201ENST00000217398 COL18A1P39060 1754 aa26.22■■□□□ 1.79
PXMP4-201ENST00000217398 DISP2A7MBM2 1401 aa26.22■■□□□ 1.79
PXMP4-201ENST00000217398 NEUROD1Q13562 356 aa26.21■■□□□ 1.79
PXMP4-201ENST00000217398 ROCK2O75116 1388 aaKnown RBP26.2■■□□□ 1.79
PXMP4-201ENST00000217398 COL5A2P05997 1499 aaPredicted RBP26.2■■□□□ 1.78
PXMP4-201ENST00000217398 LARP1Q6PKG0 1096 aaKnown RBP26.2■■□□□ 1.78
PXMP4-201ENST00000217398 BARGINQ6ZT62 677 aa26.2■■□□□ 1.78
PXMP4-201ENST00000217398 EVC2Q86UK5 1308 aa26.19■■□□□ 1.78
PXMP4-201ENST00000217398 BAG6P46379 1132 aa26.19■■□□□ 1.78
PXMP4-201ENST00000217398 PARP4Q9UKK3 1724 aaKnown RBP26.17■■□□□ 1.78
PXMP4-201ENST00000217398 LRP5O75197 1615 aa26.15■■□□□ 1.78
PXMP4-201ENST00000217398 EVA1CP58658 441 aa26.15■■□□□ 1.78
PXMP4-201ENST00000217398 EN1Q05925 392 aaPredicted RBP26.15■■□□□ 1.78
PXMP4-201ENST00000217398 CPSF1Q10570 1443 aaKnown RBP26.14■■□□□ 1.78
PXMP4-201ENST00000217398 USP35Q9P2H5 1018 aa26.14■■□□□ 1.78
PXMP4-201ENST00000217398 AATKQ6ZMQ8 1374 aa26.13■■□□□ 1.77
PXMP4-201ENST00000217398 SBNO2Q9Y2G9 1366 aa26.13■■□□□ 1.77
PXMP4-201ENST00000217398 NLRP6P59044 892 aa26.13■■□□□ 1.77
PXMP4-201ENST00000217398 TCP11L2Q8N4U5 519 aa26.13■■□□□ 1.77
PXMP4-201ENST00000217398 MON2Q7Z3U7 1717 aa26.13■■□□□ 1.77
PXMP4-201ENST00000217398 TTC21BQ7Z4L5 1316 aa26.12■■□□□ 1.77
PXMP4-201ENST00000217398 FAM196AQ6ZSG2 479 aa26.11■■□□□ 1.77
PXMP4-201ENST00000217398 THRAP3Q9Y2W1 955 aaKnown RBP26.11■■□□□ 1.77
PXMP4-201ENST00000217398 RGPD5Q99666 1765 aa26.1■■□□□ 1.77
PXMP4-201ENST00000217398 CRB1P82279 1406 aa26.1■■□□□ 1.77
PXMP4-201ENST00000217398 WNK3Q9BYP7 1800 aa26.09■■□□□ 1.77
PXMP4-201ENST00000217398 RREB1Q92766 1687 aa26.09■■□□□ 1.77
PXMP4-201ENST00000217398 PEAK1Q9H792 1746 aa26.09■■□□□ 1.77
PXMP4-201ENST00000217398 ZNF692Q9BU19 519 aaPredicted RBP26.09■■□□□ 1.77
PXMP4-201ENST00000217398 TRIM37O94972 964 aa26.08■■□□□ 1.77
PXMP4-201ENST00000217398 CAMKK2Q96RR4 588 aa26.08■■□□□ 1.77
PXMP4-201ENST00000217398 USP54Q70EL1 1684 aa26.08■■□□□ 1.77
PXMP4-201ENST00000217398 CD163L1Q9NR16 1453 aa26.07■■□□□ 1.76
PXMP4-201ENST00000217398 NFAT5O94916 1531 aa26.07■■□□□ 1.76
PXMP4-201ENST00000217398 LRRC37A3O60309 1634 aa26.06■■□□□ 1.76
PXMP4-201ENST00000217398 PSDA5PKW4 1024 aaPredicted RBP26.06■■□□□ 1.76
PXMP4-201ENST00000217398 EZH2Q15910 746 aaKnown RBP26.06■■□□□ 1.76
PXMP4-201ENST00000217398 AXIN2Q9Y2T1 843 aa26.06■■□□□ 1.76
PXMP4-201ENST00000217398 ARHGEF25Q86VW2 580 aa26.05■■□□□ 1.76
PXMP4-201ENST00000217398 TTC21AQ8NDW8 1320 aa26.05■■□□□ 1.76
PXMP4-201ENST00000217398 SBF2Q86WG5 1849 aa26.04■■□□□ 1.76
PXMP4-201ENST00000217398 PDE3BQ13370 1112 aa26.04■■□□□ 1.76
PXMP4-201ENST00000217398 NUP188Q5SRE5 1749 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms