RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CCDC85AQ96PX6 553 aaPredicted RBP16.89■□□□□ 0.29
SIX4-201ENST00000216513 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
SIX4-201ENST00000216513 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
SIX4-201ENST00000216513 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
SIX4-201ENST00000216513 GRM1Q13255 1194 aa16.88■□□□□ 0.29
SIX4-201ENST00000216513 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
SIX4-201ENST00000216513 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
SIX4-201ENST00000216513 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
SIX4-201ENST00000216513 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
SIX4-201ENST00000216513 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
SIX4-201ENST00000216513 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
SIX4-201ENST00000216513 ZSCAN29Q8IWY8 852 aaPredicted RBP16.86■□□□□ 0.29
SIX4-201ENST00000216513 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
SIX4-201ENST00000216513 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
SIX4-201ENST00000216513 TRDNQ13061 729 aa16.86■□□□□ 0.29
SIX4-201ENST00000216513 ERICH2A1L162 156 aa16.85■□□□□ 0.29
SIX4-201ENST00000216513 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
SIX4-201ENST00000216513 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
SIX4-201ENST00000216513 NME9Q86XW9 330 aa16.85■□□□□ 0.29
SIX4-201ENST00000216513 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
SIX4-201ENST00000216513 GNL3LQ9NVN8 582 aaKnown RBP16.85■□□□□ 0.29
SIX4-201ENST00000216513 KDM4AO75164 1064 aa16.85■□□□□ 0.29
SIX4-201ENST00000216513 ROCK1Q13464 1354 aa16.85■□□□□ 0.29
SIX4-201ENST00000216513 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
SIX4-201ENST00000216513 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
SIX4-201ENST00000216513 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
SIX4-201ENST00000216513 WWC1Q8IX03 1113 aa16.84■□□□□ 0.29
SIX4-201ENST00000216513 ZNF622Q969S3 477 aaKnown RBP eCLIP16.84■□□□□ 0.29
SIX4-201ENST00000216513 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
SIX4-201ENST00000216513 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
SIX4-201ENST00000216513 FOSBP53539 338 aa16.83■□□□□ 0.29
SIX4-201ENST00000216513 TBC1D2BQ9UPU7 963 aa16.83■□□□□ 0.28
SIX4-201ENST00000216513 PCF11O94913 1555 aaKnown RBP16.83■□□□□ 0.28
SIX4-201ENST00000216513 C16orf71Q8IYS4 520 aaPredicted RBP16.83■□□□□ 0.28
SIX4-201ENST00000216513 PRKRIP1Q9H875 184 aaPredicted RBP16.83■□□□□ 0.28
SIX4-201ENST00000216513 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
SIX4-201ENST00000216513 ADGRF5Q8IZF2 1346 aa16.82■□□□□ 0.28
SIX4-201ENST00000216513 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
SIX4-201ENST00000216513 RFC4P35249 363 aa16.82■□□□□ 0.28
SIX4-201ENST00000216513 DNAJC2Q99543 621 aaKnown RBP16.82■□□□□ 0.28
SIX4-201ENST00000216513 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
SIX4-201ENST00000216513 RPGRQ92834 1020 aaKnown RBP16.81■□□□□ 0.28
SIX4-201ENST00000216513 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
SIX4-201ENST00000216513 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
SIX4-201ENST00000216513 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
SIX4-201ENST00000216513 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
SIX4-201ENST00000216513 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
SIX4-201ENST00000216513 POLD1P28340 1107 aa16.81■□□□□ 0.28
SIX4-201ENST00000216513 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
SIX4-201ENST00000216513 TIAM1Q13009 1591 aa16.8■□□□□ 0.28
SIX4-201ENST00000216513 SIL1Q9H173 461 aa16.8■□□□□ 0.28
SIX4-201ENST00000216513 MSNP26038 577 aaKnown RBP16.8■□□□□ 0.28
SIX4-201ENST00000216513 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
SIX4-201ENST00000216513 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
SIX4-201ENST00000216513 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
SIX4-201ENST00000216513 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
SIX4-201ENST00000216513 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 CCDC34Q96HJ3 373 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 H3BQV1 296 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
SIX4-201ENST00000216513 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
SIX4-201ENST00000216513 NOS1P29475 1434 aa16.79■□□□□ 0.28
SIX4-201ENST00000216513 C19orf44Q9H6X5 657 aa16.78■□□□□ 0.28
SIX4-201ENST00000216513 DDB1Q16531 1140 aa16.78■□□□□ 0.28
SIX4-201ENST00000216513 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
SIX4-201ENST00000216513 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
SIX4-201ENST00000216513 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
SIX4-201ENST00000216513 ATP10BO94823 1461 aa16.77■□□□□ 0.28
SIX4-201ENST00000216513 TWISTNBQ3B726 338 aaPredicted RBP16.77■□□□□ 0.28
SIX4-201ENST00000216513 ZMYM3Q14202 1370 aa16.77■□□□□ 0.28
SIX4-201ENST00000216513 ZNF518AQ6AHZ1 1483 aa16.77■□□□□ 0.28
SIX4-201ENST00000216513 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
SIX4-201ENST00000216513 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
SIX4-201ENST00000216513 PLCH2O75038 1416 aa16.77■□□□□ 0.28
SIX4-201ENST00000216513 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.27
SIX4-201ENST00000216513 TMOD2Q9NZR1 351 aa16.77■□□□□ 0.27
SIX4-201ENST00000216513 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.27
SIX4-201ENST00000216513 ANKRD24Q8TF21 1146 aa16.77■□□□□ 0.27
SIX4-201ENST00000216513 KDM5BQ9UGL1 1544 aa16.77■□□□□ 0.27
SIX4-201ENST00000216513 NRDCO43847 1150 aa16.77■□□□□ 0.27
SIX4-201ENST00000216513 CPLX2Q6PUV4 134 aaKnown RBP16.77■□□□□ 0.27
SIX4-201ENST00000216513 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
SIX4-201ENST00000216513 A2MP01023 1474 aa16.76■□□□□ 0.27
SIX4-201ENST00000216513 CPLX1O14810 134 aa16.76■□□□□ 0.27
SIX4-201ENST00000216513 TRIM29Q14134 588 aa16.76■□□□□ 0.27
SIX4-201ENST00000216513 KIAA2012Q0VF49 1180 aa16.76■□□□□ 0.27
SIX4-201ENST00000216513 MCTP1Q6DN14 999 aa16.76■□□□□ 0.27
SIX4-201ENST00000216513 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
SIX4-201ENST00000216513 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
SIX4-201ENST00000216513 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
SIX4-201ENST00000216513 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
SIX4-201ENST00000216513 ACEP12821 1306 aa16.75■□□□□ 0.27
SIX4-201ENST00000216513 ERC2O15083 957 aa16.75■□□□□ 0.27
SIX4-201ENST00000216513 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms