RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
RTCB-201ENST00000216038 PRKRIP1Q9H875 184 aaPredicted RBP13.54□□□□□ -0.24
RTCB-201ENST00000216038 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
RTCB-201ENST00000216038 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
RTCB-201ENST00000216038 TNNT2P45379 298 aaPredicted RBP13.54□□□□□ -0.24
RTCB-201ENST00000216038 NME9Q86XW9 330 aa13.54□□□□□ -0.24
RTCB-201ENST00000216038 FYB1O15117 783 aa13.53□□□□□ -0.24
RTCB-201ENST00000216038 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
RTCB-201ENST00000216038 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
RTCB-201ENST00000216038 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
RTCB-201ENST00000216038 PLEKHG5O94827 1062 aa13.52□□□□□ -0.24
RTCB-201ENST00000216038 PIP4K2BP78356 416 aa13.52□□□□□ -0.24
RTCB-201ENST00000216038 CERKQ8TCT0 537 aa13.52□□□□□ -0.24
RTCB-201ENST00000216038 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.24
RTCB-201ENST00000216038 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
RTCB-201ENST00000216038 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
RTCB-201ENST00000216038 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
RTCB-201ENST00000216038 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
RTCB-201ENST00000216038 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
RTCB-201ENST00000216038 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
RTCB-201ENST00000216038 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
RTCB-201ENST00000216038 TOM1O60784 492 aa13.49□□□□□ -0.25
RTCB-201ENST00000216038 FBLN1P23142 703 aa13.49□□□□□ -0.25
RTCB-201ENST00000216038 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
RTCB-201ENST00000216038 NPHP3Q7Z494 1330 aa13.49□□□□□ -0.25
RTCB-201ENST00000216038 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
RTCB-201ENST00000216038 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
RTCB-201ENST00000216038 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
RTCB-201ENST00000216038 SOX12O15370 315 aa13.48□□□□□ -0.25
RTCB-201ENST00000216038 TTC21AQ8NDW8 1320 aa13.47□□□□□ -0.25
RTCB-201ENST00000216038 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
RTCB-201ENST00000216038 NLRP6P59044 892 aa13.47□□□□□ -0.25
RTCB-201ENST00000216038 RALBP1Q15311 655 aa13.47□□□□□ -0.25
RTCB-201ENST00000216038 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
RTCB-201ENST00000216038 COG3Q96JB2 828 aa13.47□□□□□ -0.25
RTCB-201ENST00000216038 ANKRD26Q9UPS8 1709 aa13.46□□□□□ -0.25
RTCB-201ENST00000216038 PXDNQ92626 1479 aa13.46□□□□□ -0.25
RTCB-201ENST00000216038 NSD2O96028 1365 aa13.46□□□□□ -0.26
RTCB-201ENST00000216038 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
RTCB-201ENST00000216038 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
RTCB-201ENST00000216038 NHSL1Q5SYE7 1610 aa13.44□□□□□ -0.26
RTCB-201ENST00000216038 IQSEC2Q5JU85 1478 aa13.43□□□□□ -0.26
RTCB-201ENST00000216038 MARF1Q9Y4F3 1742 aaKnown RBP13.43□□□□□ -0.26
RTCB-201ENST00000216038 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
RTCB-201ENST00000216038 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
RTCB-201ENST00000216038 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
RTCB-201ENST00000216038 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
RTCB-201ENST00000216038 ALS2Q96Q42 1657 aa13.42□□□□□ -0.26
RTCB-201ENST00000216038 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
RTCB-201ENST00000216038 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
RTCB-201ENST00000216038 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
RTCB-201ENST00000216038 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
RTCB-201ENST00000216038 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
RTCB-201ENST00000216038 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
RTCB-201ENST00000216038 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
RTCB-201ENST00000216038 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
RTCB-201ENST00000216038 MTHFSP49914 203 aa13.4□□□□□ -0.26
RTCB-201ENST00000216038 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
RTCB-201ENST00000216038 PHLPP1O60346 1717 aa13.4□□□□□ -0.26
RTCB-201ENST00000216038 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
RTCB-201ENST00000216038 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
RTCB-201ENST00000216038 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
RTCB-201ENST00000216038 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
RTCB-201ENST00000216038 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
RTCB-201ENST00000216038 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
RTCB-201ENST00000216038 POLKQ9UBT6 870 aa13.39□□□□□ -0.27
RTCB-201ENST00000216038 GCP02774 474 aa13.37□□□□□ -0.27
RTCB-201ENST00000216038 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
RTCB-201ENST00000216038 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
RTCB-201ENST00000216038 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
RTCB-201ENST00000216038 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
RTCB-201ENST00000216038 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
RTCB-201ENST00000216038 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
RTCB-201ENST00000216038 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
RTCB-201ENST00000216038 SUPT16HQ9Y5B9 1047 aaKnown RBP13.36□□□□□ -0.27
RTCB-201ENST00000216038 COL16A1Q07092 1604 aaPredicted RBP13.36□□□□□ -0.27
RTCB-201ENST00000216038 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
RTCB-201ENST00000216038 USP19O94966 1318 aa13.35□□□□□ -0.27
RTCB-201ENST00000216038 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
RTCB-201ENST00000216038 LTN1O94822 1766 aa13.35□□□□□ -0.27
RTCB-201ENST00000216038 AATKQ6ZMQ8 1374 aa13.35□□□□□ -0.27
RTCB-201ENST00000216038 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
RTCB-201ENST00000216038 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
RTCB-201ENST00000216038 NFAT5O94916 1531 aa13.34□□□□□ -0.27
RTCB-201ENST00000216038 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
RTCB-201ENST00000216038 SLIT3O75094 1523 aa13.33□□□□□ -0.27
RTCB-201ENST00000216038 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
RTCB-201ENST00000216038 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.28
RTCB-201ENST00000216038 HSPA1LP34931 641 aa13.33□□□□□ -0.28
RTCB-201ENST00000216038 AMPHP49418 695 aa13.33□□□□□ -0.28
RTCB-201ENST00000216038 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
RTCB-201ENST00000216038 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
RTCB-201ENST00000216038 CFAP53Q96M91 514 aa13.32□□□□□ -0.28
RTCB-201ENST00000216038 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
RTCB-201ENST00000216038 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
RTCB-201ENST00000216038 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
RTCB-201ENST00000216038 ABCA3Q99758 1704 aa13.31□□□□□ -0.28
RTCB-201ENST00000216038 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
RTCB-201ENST00000216038 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
RTCB-201ENST00000216038 PRKCSHP14314 528 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms