RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 NUTM2BA6NNL0 878 aaPredicted RBP22.76■■□□□ 1.23
MBD3-201ENST00000156825 NUTM2EB1AL46 878 aaPredicted RBP22.76■■□□□ 1.23
MBD3-201ENST00000156825 NUTM2AQ8IVF1 878 aaPredicted RBP22.76■■□□□ 1.23
MBD3-201ENST00000156825 SLC52A1Q9NWF4 448 aa22.76■■□□□ 1.23
MBD3-201ENST00000156825 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
MBD3-201ENST00000156825 GNAI2P04899 355 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 GOLGA6L1Q8N7Z2 621 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 CDK13Q14004 1512 aaKnown RBP22.74■■□□□ 1.23
MBD3-201ENST00000156825 ERBINQ96RT1 1412 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
MBD3-201ENST00000156825 WAPLQ7Z5K2 1190 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 STK11IPQ8N1F8 1099 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 TPM1P09493 284 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 MIS18AQ9NYP9 233 aa22.74■■□□□ 1.23
MBD3-201ENST00000156825 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
MBD3-201ENST00000156825 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
MBD3-201ENST00000156825 CCDC73Q6ZRK6 1079 aa22.72■■□□□ 1.23
MBD3-201ENST00000156825 DAPK1P53355 1430 aa22.72■■□□□ 1.23
MBD3-201ENST00000156825 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
MBD3-201ENST00000156825 SASS6Q6UVJ0 657 aa22.72■■□□□ 1.23
MBD3-201ENST00000156825 SAFBQ15424 915 aaKnown RBP eCLIP22.72■■□□□ 1.23
MBD3-201ENST00000156825 RRP12Q5JTH9 1297 aaKnown RBP22.72■■□□□ 1.23
MBD3-201ENST00000156825 ZNF692Q9BU19 519 aaPredicted RBP22.71■■□□□ 1.23
MBD3-201ENST00000156825 AAMPQ13685 434 aa22.7■■□□□ 1.22
MBD3-201ENST00000156825 ATF7IPQ6VMQ6 1270 aa22.7■■□□□ 1.22
MBD3-201ENST00000156825 CABP4P57796 275 aa22.7■■□□□ 1.22
MBD3-201ENST00000156825 C11orf95C9JLR9 678 aaPredicted RBP22.7■■□□□ 1.22
MBD3-201ENST00000156825 TPM2P07951 284 aa22.7■■□□□ 1.22
MBD3-201ENST00000156825 HOMER1Q86YM7 354 aa22.69■■□□□ 1.22
MBD3-201ENST00000156825 EHBP1L1Q8N3D4 1523 aa22.69■■□□□ 1.22
MBD3-201ENST00000156825 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
MBD3-201ENST00000156825 CEBPZQ03701 1054 aaKnown RBP22.68■■□□□ 1.22
MBD3-201ENST00000156825 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
MBD3-201ENST00000156825 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
MBD3-201ENST00000156825 SDF4Q9BRK5 362 aa22.68■■□□□ 1.22
MBD3-201ENST00000156825 CNNM1Q9NRU3 951 aa22.68■■□□□ 1.22
MBD3-201ENST00000156825 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
MBD3-201ENST00000156825 KIF6Q6ZMV9 814 aa22.68■■□□□ 1.22
MBD3-201ENST00000156825 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
MBD3-201ENST00000156825 IL1RAPL2Q9NP60 686 aa22.67■■□□□ 1.22
MBD3-201ENST00000156825 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
MBD3-201ENST00000156825 SRCIN1Q9C0H9 1055 aa22.67■■□□□ 1.22
MBD3-201ENST00000156825 PRDM11Q9NQV5 511 aa22.67■■□□□ 1.22
MBD3-201ENST00000156825 SKAP1Q86WV1 359 aa22.67■■□□□ 1.22
MBD3-201ENST00000156825 CAVIN1Q6NZI2 390 aaKnown RBP22.67■■□□□ 1.22
MBD3-201ENST00000156825 TBC1D2BQ9UPU7 963 aa22.66■■□□□ 1.22
MBD3-201ENST00000156825 IPO7O95373 1038 aaKnown RBP22.65■■□□□ 1.22
MBD3-201ENST00000156825 STK3Q13188 491 aa22.65■■□□□ 1.22
MBD3-201ENST00000156825 HSP90AA2PQ14568 343 aaPredicted RBP22.65■■□□□ 1.22
MBD3-201ENST00000156825 CCDC47Q96A33 483 aaKnown RBP22.65■■□□□ 1.22
MBD3-201ENST00000156825 NUDT16Q96DE0 195 aaKnown RBP22.65■■□□□ 1.22
MBD3-201ENST00000156825 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
MBD3-201ENST00000156825 FIBPO43427 364 aa22.65■■□□□ 1.22
MBD3-201ENST00000156825 PSMA5P28066 241 aa22.65■■□□□ 1.22
MBD3-201ENST00000156825 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
MBD3-201ENST00000156825 PRPF40AO75400 957 aaKnown RBP22.65■■□□□ 1.22
MBD3-201ENST00000156825 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
MBD3-201ENST00000156825 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
MBD3-201ENST00000156825 MVPQ14764 893 aaKnown RBP22.64■■□□□ 1.21
MBD3-201ENST00000156825 ANKRD20A12PQ8NF67 263 aa22.64■■□□□ 1.21
MBD3-201ENST00000156825 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.21
MBD3-201ENST00000156825 MCM10Q7L590 875 aa22.64■■□□□ 1.21
MBD3-201ENST00000156825 FMNL2Q96PY5 1086 aa22.64■■□□□ 1.21
MBD3-201ENST00000156825 ARHGEF11O15085 1522 aa22.64■■□□□ 1.21
MBD3-201ENST00000156825 NAIPQ13075 1403 aa22.63■■□□□ 1.21
MBD3-201ENST00000156825 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
MBD3-201ENST00000156825 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.63■■□□□ 1.21
MBD3-201ENST00000156825 WDR63Q8IWG1 891 aa22.63■■□□□ 1.21
MBD3-201ENST00000156825 TRAK2O60296 914 aa22.63■■□□□ 1.21
MBD3-201ENST00000156825 SMG6Q86US8 1419 aaKnown RBP22.63■■□□□ 1.21
MBD3-201ENST00000156825 SRGAP3O43295 1099 aa22.62■■□□□ 1.21
MBD3-201ENST00000156825 LRRCC1Q9C099 1032 aa22.62■■□□□ 1.21
MBD3-201ENST00000156825 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
MBD3-201ENST00000156825 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
MBD3-201ENST00000156825 HOOK1Q9UJC3 728 aaKnown RBP22.62■■□□□ 1.21
MBD3-201ENST00000156825 CCDC61Q9Y6R9 512 aa22.62■■□□□ 1.21
MBD3-201ENST00000156825 FAM13BQ9NYF5 915 aa22.62■■□□□ 1.21
MBD3-201ENST00000156825 TMPOP42166 694 aaKnown RBP22.61■■□□□ 1.21
MBD3-201ENST00000156825 CCDC43Q96MW1 224 aaKnown RBP22.61■■□□□ 1.21
MBD3-201ENST00000156825 IFT57Q9NWB7 429 aa22.61■■□□□ 1.21
MBD3-201ENST00000156825 TNNT3P45378 269 aaPredicted RBP22.61■■□□□ 1.21
MBD3-201ENST00000156825 CCT4P50991 539 aaKnown RBP22.6■■□□□ 1.21
MBD3-201ENST00000156825 PPP1R1BQ9UD71 204 aaPredicted RBP22.6■■□□□ 1.21
MBD3-201ENST00000156825 TTC39AQ5SRH9 613 aa22.6■■□□□ 1.21
MBD3-201ENST00000156825 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
MBD3-201ENST00000156825 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
MBD3-201ENST00000156825 USHBP1Q8N6Y0 703 aa22.59■■□□□ 1.21
MBD3-201ENST00000156825 FBXO31Q5XUX0 539 aaPredicted RBP22.59■■□□□ 1.21
MBD3-201ENST00000156825 TMEM57Q8N5G2 664 aa22.59■■□□□ 1.21
MBD3-201ENST00000156825 SPINK5Q9NQ38 1064 aaPredicted RBP22.59■■□□□ 1.21
MBD3-201ENST00000156825 EPRSP07814 1512 aaKnown RBP22.59■■□□□ 1.21
MBD3-201ENST00000156825 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
MBD3-201ENST00000156825 MPNDQ8N594 471 aa22.59■■□□□ 1.21
MBD3-201ENST00000156825 FKBP4Q02790 459 aaKnown RBP eCLIP22.58■■□□□ 1.211e-6■■■□□ 15.1
MBD3-201ENST00000156825 NASPP49321 788 aaPredicted RBP22.58■■□□□ 1.21
MBD3-201ENST00000156825 EXOC6BQ9Y2D4 811 aa22.58■■□□□ 1.21
MBD3-201ENST00000156825 CCDC158Q5M9N0 1113 aa22.58■■□□□ 1.2
MBD3-201ENST00000156825 BACH2Q9BYV9 841 aa22.58■■□□□ 1.2
MBD3-201ENST00000156825 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms