RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Iffo2Q8R2V2 512 aa12.53□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 Supt5hO55201 1082 aaKnown RBP12.53□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 Polr3dQ91WD1 398 aa12.53□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 Golga3P55937 1487 aa12.53□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 StamP70297 548 aa12.53□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 Taf12Q8VE65 161 aa12.53□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 Synj1Q8CHC4 1574 aa12.52□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 PogzQ8BZH4 1409 aaKnown RBP12.52□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 Fnbp4Q6ZQ03 1031 aa12.52□□□□□ -0.4
Pdgfra-202ENSMUST00000168162 DroshaQ5HZJ0 1373 aaKnown RBP12.52□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ccdc155Q80VJ8 648 aa12.52□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Znf330Q922H9 316 aa12.51□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ppfibp2O35711 882 aa12.51□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ncf1Q09014 390 aa12.51□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ankib1Q6ZPS6 1085 aa12.51□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Fkbp4P30416 458 aa12.51□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 OvosQ3UU35 1456 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 SfswapQ3USH5 945 aaKnown RBP12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Cfap69Q8BH53 942 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Slc14a2Q8R4T9 930 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Pm20d1Q8C165 503 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Hdgfl1Q2VPR5 283 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Washc4Q3UMB9 1173 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ythdc2B2RR83 1445 aaKnown RBP12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Jarid2Q62315 1234 aa12.5□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ferd3lQ923Z4 168 aa12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 CanxP35564 591 aaKnown RBP12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Cadps2Q8BYR5 1297 aa12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Mad1l1Q9WTX8 717 aaKnown RBP12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 DekQ7TNV0 380 aaKnown RBP12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Rock1P70335 1354 aa12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Rock2P70336 1388 aa12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Pde4dQ01063 747 aa12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Vps37dQ810I0 261 aa12.49□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ccnl1Q52KE7 532 aaKnown RBP12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Tpd52l2Q9CYZ2 220 aaKnown RBP12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Cfap52Q5F201 620 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 AceP09470 1312 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Stard3nlQ9DCI3 235 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Gm21969J3QJZ1 289 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 HypkQ9CR41 129 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Mia2Q91ZV0 1396 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Pde3bQ61409 1100 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Zmynd15Q8C0R7 736 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Spire2Q8K1S6 718 aa12.48□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Smarca2Q6DIC0 1577 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Efcab5A0JP43 1406 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 AU015836B2RUM3 263 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Gdpd2Q9ESM6 539 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 A2mQ6GQT1 1474 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Palm3A2TJV2 734 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Pkd2O35245 966 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ddx17Q501J6 650 aaKnown RBP12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Zc3h12cQ5DTV4 884 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Txnrd1Q9JMH6 613 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Ehmt1Q5DW34 1296 aa12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Nop9Q8BMC4 636 aaKnown RBP12.47□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 MpripP97434 1024 aa12.46□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Fez1Q8K0X8 392 aa12.46□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Kdm8Q9CXT6 414 aa12.46□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Slain2Q8CI08 581 aa12.46□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Tpm3-rs7D3Z2H9 248 aa12.46□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Tbc1d32Q3URV1 1296 aa12.46□□□□□ -0.41
Pdgfra-202ENSMUST00000168162 Rundc1Q0VDN7 615 aa12.46□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Eif2s2Q99L45 331 aaKnown RBP12.45□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Rai14Q9EP71 979 aaKnown RBP12.45□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Ccdc141E9Q8Q6 1531 aa12.45□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Ccdc174Q3U155 467 aa12.45□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Ginm1Q91WR6 327 aa12.45□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 FanciQ8K368 1330 aa12.44□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Micall1Q8BGT6 870 aa12.44□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Anp32aO35381 247 aa12.44□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 TimelessQ9R1X4 1197 aa12.44□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Scaf1Q5U4C3 1256 aaKnown RBP12.44□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Upf2A2AT37 1269 aaKnown RBP12.43□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Fndc3aQ8BX90 1198 aa12.43□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Hoxd10P28359 340 aa12.43□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Gimap8Q75N62 688 aa12.43□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Atp6v1aP50516 617 aaKnown RBP12.43□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Cdk19Q8BWD8 501 aa12.43□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 PnisrA2AJT4 805 aaKnown RBP12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 AampJ3QN89 436 aa12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Gm38655A0A286YDK6 273 aa12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Pde4cQ3UEI1 686 aa12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Wdr7Q920I9 1489 aa12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Rbm17Q8JZX4 405 aaKnown RBP12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 HnrnpuQ8VEK3 800 aaKnown RBP12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Arhgef5E9Q7D5 1581 aa12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Large2Q5XPT3 690 aa12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Lrrc59Q922Q8 307 aaKnown RBP12.42□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Kcnh8P59111 1102 aa12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Snap47Q8R570 413 aa12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Sel1lQ9Z2G6 790 aa12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Mrs2Q5NCE8 434 aa12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Ccdc9Q8VC31 543 aaKnown RBP12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Stard8Q8K031 1019 aa12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Nip7Q9CXK8 180 aaKnown RBP12.41□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Cfdp1O88271 295 aaKnown RBP12.4□□□□□ -0.42
Pdgfra-202ENSMUST00000168162 Tsen2Q6P7W5 460 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 77.8 ms