RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Dusp4Q8BFV3 398 aa12.38□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 NacadQ5SWP3 1504 aa12.37□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Wnt7bP28047 349 aa12.37□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 LmnaP48678 665 aaKnown RBP12.37□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Cog6Q8R3I3 657 aa12.37□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Kdm5dQ62240 1548 aa12.37□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Saxo1B1AXP3 476 aa12.36□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Mecp2Q9Z2D6 484 aaKnown RBP12.36□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Eno4Q8C042 619 aa12.35□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Zfp362B1ASA5 418 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Aldh1a1P24549 501 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Gpsm3Q3U1Z5 159 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Cln3Q61124 438 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Q6PAC4 1279 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Sh3d21Q7TSG5 549 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Lrch3Q8BVU0 778 aa12.34□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 KhsrpQ3U0V1 748 aaKnown RBP12.32□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Ipcef1Q5DU31 406 aa12.32□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Qtrt2B8ZXI1 415 aa12.31□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 KitP05532 979 aa12.31□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Tcf25Q8R3L2 676 aaKnown RBP12.31□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Gatad2bQ8VHR5 594 aaKnown RBP12.31□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Fam174aQ9D3L0 190 aa12.31□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Tll2Q9WVM6 1012 aa12.31□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Mcm6P97311 821 aa12.3□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Kctd15Q8K0E1 283 aa12.3□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Epb42P49222 691 aa12.29□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Grxcr1Q50H32 290 aa12.29□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Fkbp5Q64378 456 aa12.29□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Krtap4-1Q3UUY3 169 aa12.28□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Pde3bQ61409 1100 aa12.28□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Desi1Q9CQT7 168 aa12.28□□□□□ -0.44
Ccdc54-201ENSMUST00000062439 Thsd4Q3UTY6 1018 aa12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Map4k5Q8BPM2 847 aaKnown RBP12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Sirt1Q923E4 737 aa12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Mtfr1Q99MB2 328 aa12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Suv39h2Q9EQQ0 477 aa12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Hao2Q9NYQ2 353 aa12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Rlbp1Q9Z275 317 aa12.27□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 ColqO35348 457 aa12.26□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Q8BT18 775 aa12.26□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Gm21698A0A087WQP8 267 aa12.25□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Ccser2Q3UHI0 833 aa12.25□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Ints6lQ8BND4 861 aa12.25□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Tmem164Q6PHN7 296 aa12.24□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Kirrel2Q7TSU7 700 aa12.23□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Nsfl1cQ9CZ44 370 aaKnown RBP12.23□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 JundP15066 341 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 AaasP58742 546 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Ncoa4Q5U4H9 625 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Kif12Q9D2Z8 642 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Plpp6Q9D4F2 292 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Rmi1Q9D4G9 616 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Krtap3-2Q9D638 99 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Krtap3-3Q9D7P0 99 aa12.22□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Dcaf1Q80TR8 1506 aa12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Cspp1B2RX88 1205 aa12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Rfx1P48377 963 aa12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Foxk2Q3UCQ1 651 aa12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Atp1a2Q6PIE5 1020 aa12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Kiaa0391Q8JZY4 584 aaKnown RBP12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Gtf2iQ9ESZ8 998 aaKnown RBP12.21□□□□□ -0.45
Ccdc54-201ENSMUST00000062439 Wnt7aP24383 349 aa12.2□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Bmt2Q8BXK4 403 aa12.2□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Gdpd2Q9ESM6 539 aa12.2□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Erbb4Q61527 1308 aa12.19□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Ttll12Q3UDE2 639 aa12.19□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Kiaa1211Q5PR69 1207 aa12.19□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Fbxo22Q78JE5 402 aa12.19□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 IrgqQ8VIM9 583 aa12.19□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 HrcG5E8J6 738 aa12.18□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Ppm1fQ8CGA0 452 aa12.18□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Fyb2A2A995 729 aa12.17□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Kif4P33174 1231 aa12.17□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Nudt18Q3U2V3 323 aa12.17□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 LpoQ5SW46 710 aa12.17□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Zbtb4Q5F293 982 aa12.16□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Havcr2Q8VIM0 281 aa12.16□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Cd2apQ9JLQ0 637 aa12.16□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 D630036H23RikQ3UQD6 204 aa12.15□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 EgflamQ4VBE4 1017 aa12.15□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Zbtb42Q811H0 420 aa12.15□□□□□ -0.46
Ccdc54-201ENSMUST00000062439 Fam171a2A2A699 822 aa12.14□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Katnal1Q8K0T4 488 aa12.14□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Zbtb7cQ8VCZ7 619 aa12.14□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Sycp2Q9CUU3 1500 aa12.13□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Bicdl1A0JNT9 577 aa12.13□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Ddx54Q8K4L0 874 aaKnown RBP12.13□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Bag6Q9Z1R2 1154 aaKnown RBP12.13□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Mtmr2Q9Z2D1 643 aa12.13□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Adh6aE9Q5Z6 375 aa12.12□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Lrp8Q924X6 996 aa12.12□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Ndufb5Q9CQH3 189 aa12.12□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Lrrc46Q9DAP0 323 aa12.12□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Lemd3Q9WU40 921 aa12.12□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Brd1E9PZ26 1189 aaKnown RBP12.11□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Kcna1P16388 495 aa12.11□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Mkrn1Q9QXP6 481 aa12.11□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Snapc1Q8K0S9 389 aa12.1□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Pde3aQ9Z0X4 1141 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms