RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Psme1P97371 249 aa11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Fam50aQ9WV03 339 aaKnown RBP11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Kif14L0N7N1 1674 aaKnown RBP11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Ssh2Q5SW75 1423 aa11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 NpatQ8BMA5 1420 aa11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Fhod3Q76LL6 1578 aa11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Adgrl2Q8JZZ7 1487 aa11.66□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Znf518aB2RRF6 1478 aaKnown RBP11.65□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Cops2P61202 443 aaKnown RBP11.65□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Tsen34Q8BMZ5 316 aa11.65□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Clec2iQ9WVF9 217 aa11.65□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Naip6Q9JIB6 1403 aa11.65□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Cdc42bpgQ80UW5 1551 aa11.65□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Zfp644E9QA22 1323 aa11.64□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Map3k9Q3U1V8 1077 aa11.64□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Tmem52Q9D702 196 aa11.64□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Prdm16A2A935 1275 aa11.63□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Nob1Q8BW10 403 aa11.63□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Map3k14Q9WUL6 942 aa11.63□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Trpm1Q2TV84 1622 aa11.63□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 AlkP97793 1621 aa11.62□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 OplahQ8K010 1288 aa11.62□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Rfx7F8VPJ6 1459 aa11.62□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 UacaQ8CGB3 1411 aa11.61□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Gli2Q0VGT2 1544 aa11.61□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Topbp1Q6ZQF0 1515 aa11.61□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Abca17E9PX95 1733 aa11.61□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 RydenQ8CAK3 290 aaKnown RBP11.61□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Usp54Q8BL06 1588 aaKnown RBP11.61□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 ColqO35348 457 aa11.6□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 TsksO54887 585 aa11.6□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Cfap65Q3V0B4 1847 aa11.6□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Spag9Q58A65 1321 aaKnown RBP11.6□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Kif3bQ61771 747 aa11.59□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Asxl1P59598 1514 aa11.59□□□□□ -0.55
Ssbp1-201ENSMUST00000031971 Thsd4Q3UTY6 1018 aa11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 MlecQ6ZQI3 291 aaKnown RBP11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Zbtb7cQ8VCZ7 619 aa11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Uggt2E9Q4X2 1504 aa11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Fhad1A6PWD2 1420 aa11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Vps8Q0P5W1 1427 aa11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 ShprhQ7TPQ3 1674 aa11.58□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Camsap2Q8C1B1 1461 aa11.57□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Trpm2Q91YD4 1506 aa11.56□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Nos2P29477 1144 aa11.56□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Afap1Q80YS6 731 aa11.56□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Supt6hQ62383 1726 aaKnown RBP11.55□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Naip5Q9R016 1403 aa11.55□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Dab2P98078 766 aa11.55□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 MsmpB1AWI6 139 aa11.54□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Rasgrp4Q8BTM9 673 aa11.54□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Mia2Q91ZV0 1396 aa11.54□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Plch2A2AP18 1501 aa11.53□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Ttll5Q8CHB8 1328 aa11.53□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Abca6Q8K441 1624 aa11.53□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Myom2Q14BI5 1463 aa11.52□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Arhgap23Q69ZH9 1483 aa11.52□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 Robo2Q7TPD3 1470 aa11.52□□□□□ -0.56
Ssbp1-201ENSMUST00000031971 VaspP70460 375 aaKnown RBP11.52□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Scube3Q66PY1 993 aa11.52□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Tmem131lQ3U3D7 1597 aa11.52□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Nup155Q99P88 1391 aaKnown RBP11.52□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Myo5cE9Q1F5 1742 aa11.52□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 NclP09405 707 aaKnown RBP11.51□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Apba2P98084 750 aa11.51□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Prex1Q69ZK0 1650 aa11.51□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 CltcQ68FD5 1675 aaKnown RBP11.5□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Hoxb4P10284 250 aa11.5□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Map4P27546 1125 aaKnown RBP11.49□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Spryd7Q3TFQ1 196 aa11.49□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Cyp7a1Q64505 503 aa11.49□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 RictorQ6QI06 1708 aa11.49□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Spryd3E9Q9B3 442 aa11.48□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Ppfibp2O35711 882 aa11.48□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Kif1bQ60575 1816 aaKnown RBP11.47□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Brwd3A2AHJ4 1799 aa11.47□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Knl1Q66JQ7 1612 aa11.47□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 PtprmP28828 1452 aa11.47□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Rbm46P86049 533 aa11.47□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Grxcr1Q50H32 290 aa11.47□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 Dip2bQ3UH60 1574 aa11.46□□□□□ -0.57
Ssbp1-201ENSMUST00000031971 4930407I10RikD3Z5T8 1512 aa11.45□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 AnkarA2RT91 1465 aa11.45□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Talpid3E9PV87 1520 aa11.45□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Safb2Q80YR5 991 aaKnown RBP11.44□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Med14A2ABV5 1459 aaKnown RBP11.44□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 PtprgQ05909 1442 aa11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Ttc21bQ0HA38 1315 aa11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Ahdc1Q6PAL7 1594 aaKnown RBP11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Mphosph9A6H5Y1 991 aa11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Man1a2P39098 641 aa11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Trak1Q6PD31 939 aa11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Mtfr1Q99MB2 328 aa11.43□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Dhx9O70133 1380 aaKnown RBP11.42□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Adamts7Q68SA9 1657 aa11.42□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Cd109Q8R422 1442 aa11.42□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Ercc6l2Q9JIM3 1537 aa11.41□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Adamts8P57110 905 aa11.41□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Lamc1P02468 1607 aaKnown RBP11.41□□□□□ -0.58
Ssbp1-201ENSMUST00000031971 Myom3A2ABU4 1439 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms