RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 HmmrQ00547 794 aaKnown RBP13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Trim29Q8R2Q0 587 aa13.03□□□□□ -0.32
Ciita-201ENSMUST00000023147 Atf7ipQ7TT18 1306 aa13.02□□□□□ -0.32
Ciita-201ENSMUST00000023147 CrcpO35427 148 aa13.02□□□□□ -0.33
Ciita-201ENSMUST00000023147 NaspQ99MD9 773 aaKnown RBP13.02□□□□□ -0.33
Ciita-201ENSMUST00000023147 Wdr7Q920I9 1489 aa13.02□□□□□ -0.33
Ciita-201ENSMUST00000023147 Ncbp3Q8BZR9 615 aaKnown RBP13.02□□□□□ -0.33
Ciita-201ENSMUST00000023147 Kif3aP28741 701 aa13.02□□□□□ -0.33
Ciita-201ENSMUST00000023147 Ssh1Q76I79 1042 aa13.02□□□□□ -0.33
Ciita-201ENSMUST00000023147 Gcom1E9PZ54 550 aa13.01□□□□□ -0.33
Ciita-201ENSMUST00000023147 MyzapQ3UIJ9 466 aa13.01□□□□□ -0.33
Ciita-201ENSMUST00000023147 PxdnQ3UQ28 1475 aa13.01□□□□□ -0.33
Ciita-201ENSMUST00000023147 KinQ8K339 391 aa13.01□□□□□ -0.33
Ciita-201ENSMUST00000023147 Swt1Q9DBQ9 907 aa13.01□□□□□ -0.33
Ciita-201ENSMUST00000023147 Gnai1B2RSH2 354 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Gnai3Q9DC51 354 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Cabp4Q8VHC5 271 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Utp3Q9JI13 469 aaKnown RBP13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Magi3Q9EQJ9 1476 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Fbxo2Q80UW2 297 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Bicd2Q921C5 820 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Ppp4r3bQ922R5 820 aa13□□□□□ -0.33
Ciita-201ENSMUST00000023147 Map3k5O35099 1380 aa12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Adcy10Q8C0T9 1614 aa12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Cavin4A2AMM0 362 aa12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Rbm25B2RY56 838 aaKnown RBP12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 EzrP26040 586 aaKnown RBP12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Utp14aQ640M1 767 aaKnown RBP12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Hoxa7P02830 229 aa12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Zkscan1Q8BGS3 561 aaKnown RBP12.99□□□□□ -0.33
Ciita-201ENSMUST00000023147 Chmp7Q8R1T1 451 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 PhaxQ9JJT9 385 aaKnown RBP12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Shroom2A2ALU4 1481 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Fancd2Q80V62 1450 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Dnajc5bQ9CQ94 199 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Mcm4P49717 862 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Tceal9Q9DD24 104 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Arhgef40Q3UPH7 1517 aa12.98□□□□□ -0.33
Ciita-201ENSMUST00000023147 Puf60Q3UEB3 564 aaKnown RBP12.97□□□□□ -0.33
Ciita-201ENSMUST00000023147 Adgrl2Q8JZZ7 1487 aa12.97□□□□□ -0.33
Ciita-201ENSMUST00000023147 Igf1rQ60751 1373 aa12.97□□□□□ -0.33
Ciita-201ENSMUST00000023147 Kif18aQ91WD7 886 aa12.97□□□□□ -0.33
Ciita-201ENSMUST00000023147 Hmgn5Q9JL35 406 aa12.97□□□□□ -0.33
Ciita-201ENSMUST00000023147 Gcc1Q9D4H2 778 aa12.97□□□□□ -0.33
Ciita-201ENSMUST00000023147 Nkx1-2P42580 305 aa12.96□□□□□ -0.33
Ciita-201ENSMUST00000023147 Wwc1Q5SXA9 1104 aa12.96□□□□□ -0.33
Ciita-201ENSMUST00000023147 Commd10Q8JZY2 202 aa12.96□□□□□ -0.33
Ciita-201ENSMUST00000023147 Nek4Q9Z1J2 792 aa12.96□□□□□ -0.33
Ciita-201ENSMUST00000023147 Adgrb2Q8CGM1 1561 aa12.96□□□□□ -0.33
Ciita-201ENSMUST00000023147 Senp3Q9EP97 568 aaKnown RBP12.96□□□□□ -0.34
Ciita-201ENSMUST00000023147 Lamc1P02468 1607 aaKnown RBP12.96□□□□□ -0.34
Ciita-201ENSMUST00000023147 Nap1l1P28656 391 aaKnown RBP12.95□□□□□ -0.34
Ciita-201ENSMUST00000023147 Adamts12Q811B3 1600 aa12.95□□□□□ -0.34
Ciita-201ENSMUST00000023147 Unc13aQ4KUS2 1712 aa12.95□□□□□ -0.34
Ciita-201ENSMUST00000023147 Sycp1Q62209 993 aa12.95□□□□□ -0.34
Ciita-201ENSMUST00000023147 Phlpp2Q8BXA7 1320 aa12.95□□□□□ -0.34
Ciita-201ENSMUST00000023147 Pbrm1Q8BSQ9 1634 aaKnown RBP12.94□□□□□ -0.34
Ciita-201ENSMUST00000023147 Atp7aQ64430 1491 aa12.94□□□□□ -0.34
Ciita-201ENSMUST00000023147 Paxip1Q6NZQ4 1056 aa12.94□□□□□ -0.34
Ciita-201ENSMUST00000023147 Anp32eP97822 260 aaKnown RBP12.94□□□□□ -0.34
Ciita-201ENSMUST00000023147 Tbc1d32Q3URV1 1296 aa12.94□□□□□ -0.34
Ciita-201ENSMUST00000023147 Gpatch3Q8BIY1 525 aa12.94□□□□□ -0.34
Ciita-201ENSMUST00000023147 Tspyl2Q7TQI8 677 aa12.93□□□□□ -0.34
Ciita-201ENSMUST00000023147 PtprgQ05909 1442 aa12.93□□□□□ -0.34
Ciita-201ENSMUST00000023147 Eva1cP58659 440 aa12.93□□□□□ -0.34
Ciita-201ENSMUST00000023147 Shq1Q7TMX5 569 aa12.93□□□□□ -0.34
Ciita-201ENSMUST00000023147 Ubap1lG3UW59 384 aa12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 Q8C5K5 320 aa12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 Supt6hQ62383 1726 aaKnown RBP12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 Polr3gQ6NXY9 223 aa12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 Pdcl2Q78Y63 240 aa12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 CalrP14211 416 aaKnown RBP12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 FanciQ8K368 1330 aa12.92□□□□□ -0.34
Ciita-201ENSMUST00000023147 NexnQ7TPW1 607 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 AnlnQ8K298 1121 aaKnown RBP12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Nup160Q9Z0W3 1402 aaKnown RBP12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Sbno1Q689Z5 1390 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Ric3Q8BPM6 367 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Cog6Q8R3I3 657 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Chrna2Q91X60 512 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Smc3Q9CW03 1217 aaKnown RBP12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Prex2Q3LAC4 1598 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 AI481877A2ALV5 1481 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Fchsd2Q3USJ8 740 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Gnl3lQ6PGG6 577 aaKnown RBP12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Smc2Q8CG48 1191 aaKnown RBP12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Kdm2bQ6P1G2 1309 aa12.91□□□□□ -0.34
Ciita-201ENSMUST00000023147 Cfap99A0A140LIX9 648 aa12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 Gsto1O09131 240 aa12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 Ubxn4Q8VCH8 506 aa12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 Cep89Q9CZX2 791 aa12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 AlkP97793 1621 aa12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 Triml2E9PW10 424 aa12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 Cwc15Q9JHS9 229 aaKnown RBP12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 ScaperF8VQ70 1398 aaKnown RBP12.9□□□□□ -0.34
Ciita-201ENSMUST00000023147 A0A0U1RNP2 1173 aa12.9□□□□□ -0.35
Ciita-201ENSMUST00000023147 Erc2Q6PH08 957 aa12.9□□□□□ -0.35
Ciita-201ENSMUST00000023147 Cdk13Q69ZA1 1511 aaKnown RBP12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Dusp27Q148W8 1138 aa12.89□□□□□ -0.35
Ciita-201ENSMUST00000023147 Rbm28Q8CGC6 750 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms