RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CARNMT1Q8N4J0 409 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 CCDC33Q8N5R6 958 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 NETO2Q8NC67 525 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 PRDM16Q9HAZ2 1276 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 PRDM6Q9NQX0 595 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 TMEM248Q9NWD8 314 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 DONSONQ9NYP3 566 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 A0A1B0GVM2 712 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 TCAF2A6NFQ2 919 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 NEDD8-MDP1E9PL57 170 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 APOC4-APOC2K7ER74 178 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 MFSD11O43934 449 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 CLDN11O75508 207 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ECI2O75521 394 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 APOC2P02655 101 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 PECAM1P16284 738 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 PSMC3P17980 439 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ZNF177Q13360 481 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 NLRP14Q86W24 1093 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 CCDC117Q8IWD4 279 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ZDHHC14Q8IZN3 488 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 NPWQ8N729 165 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 KIAA1958Q8N8K9 716 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 TTC13Q8NBP0 860 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 C1orf54Q8WWF1 131 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ATG4AQ8WYN0 398 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 IRF7Q92985 503 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ASIC4Q96FT7 647 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 CELF6Q96J87 481 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 RPP25Q9BUL9 199 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 BBS2Q9BXC9 721 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 EBF3Q9H4W6 596 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 SPHK2Q9NRA0 654 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 NDFIP2Q9NV92 336 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 R3HDM2Q9Y2K5 976 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 H0Y626 953 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 GFRA2O00451 464 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 OTUD4Q01804 1114 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 FCHO2Q0JRZ9 810 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 CDH18Q13634 790 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 HTR4Q13639 388 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 PAFAH1B3Q15102 231 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 EML3Q32P44 896 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 PUS10Q3MIT2 529 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 LY6G5CQ5SRR4 150 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 CHST9Q7L1S5 443 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 DEPDC1BQ8WUY9 529 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 RSAD2Q8WXG1 361 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 ATP2A3Q93084 1043 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 TRMT61BQ9BVS5 477 aaKnown RBP17.96■□□□□ 0.47
PHGDH-230ENST00000641927 CARD6Q9BX69 1037 aa17.96■□□□□ 0.47
PHGDH-230ENST00000641927 WASH4PA8MWX3 477 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 DFFAO00273 331 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 NFATC1O95644 943 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 ARSAP15289 507 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 GDI1P31150 447 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 NR2C2P49116 596 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 MAPKAPK2P49137 400 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 C2orf54Q08AI8 447 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 SNX1Q13596 522 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 PDGFRLQ15198 375 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 DHCR24Q15392 516 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 SIX1Q15475 284 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-230ENST00000641927 MFN1Q8IWA4 741 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 PLCD3Q8N3E9 789 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 CEP112Q8N8E3 955 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 MNS1Q8NEH6 495 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 SPATA4Q8NEY3 305 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 L2HGDHQ9H9P8 463 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 DTLQ9NZJ0 730 aa17.95■□□□□ 0.46
PHGDH-230ENST00000641927 CTAGE15A4D2H0 777 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 ANHXE9PGG2 379 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 MCF2LO15068 1137 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 LUC7L3O95232 432 aaKnown RBP17.94■□□□□ 0.46
PHGDH-230ENST00000641927 ADH1CP00326 375 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 RHOCP08134 193 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 CTAGE8P0CG41 777 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 IL9P15248 144 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 HOXD9P28356 352 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-230ENST00000641927 TNK2Q07912 1038 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 SLC10A2Q12908 348 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-230ENST00000641927 MPP7Q5T2T1 576 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 C6orf118Q5T5N4 469 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 FYB2Q5VWT5 728 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 RHBDF2Q6PJF5 856 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 BZW1Q7L1Q6 419 aaKnown RBP17.94■□□□□ 0.46
PHGDH-230ENST00000641927 CTAGE6Q86UF2 777 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 ZC3H18Q86VM9 953 aaKnown RBP17.94■□□□□ 0.46
PHGDH-230ENST00000641927 ZNF354CQ86Y25 554 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 CTAGE4Q8IX94 777 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 PRELID2Q8N945 189 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 MAGOHBQ96A72 148 aaKnown RBP17.94■□□□□ 0.46
PHGDH-230ENST00000641927 P2RY11Q96G91 374 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 FAM83CQ9BQN1 747 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 HOMER3Q9NSC5 361 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 RBM12Q9NTZ6 932 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms