RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 F5H5T6 163 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 FAM72CH0Y354 149 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 C2CD2LO14523 706 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 TRDMT1O14717 391 aaKnown RBP9.98□□□□□ -0.81
PHGDH-215ENST00000641371 POLR3GO15318 223 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-215ENST00000641371 NEBLO76041 1014 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ACSL3O95573 720 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 APRTP07741 180 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ACRP10323 421 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 NR1D1P20393 614 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ETFBP38117 255 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 MMP13P45452 471 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 IFNAR2P48551 515 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 IFI35P80217 286 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-215ENST00000641371 PARP15Q460N3 678 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 C5orf22Q49AR2 442 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 TEX44Q53QW1 395 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 RABGAP1LQ5R372 815 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 TMEM240Q5SV17 173 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 FAM72AQ5TYM5 149 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 SDHAF4Q5VUM1 108 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 AFMIDQ63HM1 303 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 FAM72DQ6L9T8 149 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 CYS1Q717R9 158 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 LINC00523Q86TU6 105 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 FAM72BQ86X60 149 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 HERC6Q8IVU3 1022 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ZBED8Q8IZ13 594 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 UMODL1-AS1Q8N2C9 162 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 TTC9BQ8N6N2 239 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 LEMD2Q8NC56 503 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 CCDC110Q8TBZ0 833 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 GIPC2Q8TF65 315 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 BADQ92934 168 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 MCOLN1Q9GZU1 580 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 GBA3Q9H227 469 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ETNK1Q9HBU6 452 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 OSER1Q9NX31 292 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 LGALS13Q9UHV8 139 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ADAM21Q9UKJ8 722 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ZMYND8Q9ULU4 1186 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-215ENST00000641371 ZNF510Q9Y2H8 683 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 AAR2Q9Y312 384 aaKnown RBP9.98□□□□□ -0.81
PHGDH-215ENST00000641371 INSL5Q9Y5Q6 135 aa9.98□□□□□ -0.81
PHGDH-215ENST00000641371 EXOC1LA0A1B0GW35 172 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MAGEB16A2A368 324 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 TYW5A2RUC4 315 aaKnown RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MATN3O15232 486 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ADAM12O43184 909 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MSI1O43347 362 aaKnown RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 TLL1O43897 1013 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ACSL4O60488 711 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ANXA9O76027 345 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 TMEM63AO94886 807 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 SUN1O94901 812 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MOCS2O96007 188 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 LRG1P02750 347 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 VAV1P15498 845 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 HMGA1P17096 107 aaKnown RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 DDX6P26196 483 aaKnown RBP eCLIP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 CDC25CP30307 473 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 BMPR1AP36894 532 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MAGEA3P43357 314 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 RENBPP51606 427 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 WASHC5Q12768 1159 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 NAB1Q13506 487 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 AUHQ13825 339 aaKnown RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 KYNUQ16719 465 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 TTMPQ5BVD1 217 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MS4A13Q5J8X5 152 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 RASIP1Q5U651 963 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 NAPEPLDQ6IQ20 393 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 LRRC8BQ6P9F7 803 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 PID1Q7Z2X4 250 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 CHSY1Q86X52 802 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 CCDC117Q8IWD4 279 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 KLHDC8BQ8IXV7 354 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 BBS5Q8N3I7 341 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ARL8AQ96BM9 186 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 TLCD1Q96CP7 247 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ZNF599Q96NL3 588 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 CYTH2Q99418 400 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 LGMNQ99538 433 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 CENPHQ9H3R5 247 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 LRRC40Q9H9A6 602 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 VPS37BQ9H9H4 285 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ANLNQ9NQW6 1124 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MAGED2Q9UNF1 606 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 NEU3Q9UQ49 428 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 TEX264Q9Y6I9 313 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ALPK3Q96L96 1907 aa9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MTCL1Q9Y4B5 1905 aaKnown RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 MYO18AQ92614 2054 aaKnown RBP9.97□□□□□ -0.81
PHGDH-215ENST00000641371 ANAPC1Q9H1A4 1944 aa9.96□□□□□ -0.81
PHGDH-215ENST00000641371 NUP205Q92621 2012 aa9.96□□□□□ -0.81
PHGDH-215ENST00000641371 C5orf67F2Z3F1 127 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 I6L893 689 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TEX28O15482 410 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms