RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 NCKAP1LP55160 1127 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 RNASE9P60153 205 aaKnown RBP8.16□□□□□ -1.1
RTTN-223ENST00000640931 RHAGQ02094 409 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 OCA2Q04671 838 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 RAD51Q06609 339 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 APOFQ13790 326 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 LSM12Q3MHD2 195 aaKnown RBP8.16□□□□□ -1.1
RTTN-223ENST00000640931 FAM205BPQ63HN1 556 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 NANOGP8Q6NSW7 305 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 PPP1R2P3Q6NXS1 205 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 AFAP1L2Q8N4X5 818 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 DTX3Q8N9I9 347 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 LMO3Q8TAP4 145 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 LNX1Q8TBB1 728 aaPredicted RBP8.16□□□□□ -1.1
RTTN-223ENST00000640931 DTX3LQ8TDB6 740 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 SLC20A1Q8WUM9 679 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 TRAPPC12Q8WVT3 735 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 VPS33AQ96AX1 596 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 ACCSQ96QU6 501 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 TMEM109Q9BVC6 243 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 ACAT2Q9BWD1 397 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
RTTN-223ENST00000640931 TP63Q9H3D4 680 aaPredicted RBP8.16□□□□□ -1.1
RTTN-223ENST00000640931 C8orf33Q9H7E9 229 aaPredicted RBP8.16□□□□□ -1.1
RTTN-223ENST00000640931 BRD9Q9H8M2 597 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 PLEKHA5Q9HAU0 1116 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 TAS2R14Q9NYV8 317 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 POLG2Q9UHN1 485 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 TBX20Q9UMR3 447 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 PTPRFP10586 1907 aa8.16□□□□□ -1.1
RTTN-223ENST00000640931 TMEM238LA0A1B0GVL6 79 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 PCP4L1A6NKN8 68 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 ST8SIA5O15466 376 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 ADAMTS4O75173 837 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 IFNA14P01570 189 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 PSAPP07602 524 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CD48P09326 243 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 MTHFRP42898 656 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 JAM2P57087 298 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CYP4F2P78329 520 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 PHC1P78364 1004 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 GTF2BQ00403 316 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 MYL7Q01449 175 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 POU5F1BQ06416 359 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 ENPEPQ07075 957 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CYP4F3Q08477 520 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 BFSP1Q12934 665 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 SELENBP1Q13228 472 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 DRAP1Q14919 205 aaPredicted RBP8.15□□□□□ -1.1
RTTN-223ENST00000640931 ACAP2Q15057 778 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 STXBP2Q15833 593 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 TAF12Q16514 161 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 SLC9C1Q4G0N8 1177 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 HABP4Q5JVS0 413 aaKnown RBP8.15□□□□□ -1.1
RTTN-223ENST00000640931 HP1BP3Q5SSJ5 553 aaPredicted RBP8.15□□□□□ -1.1
RTTN-223ENST00000640931 C6orf163Q5TEZ5 329 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 OTOP3Q7RTS5 596 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 RIOX2Q8IUF8 465 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CCNYL1Q8N7R7 359 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 TTC13Q8NBP0 860 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 RFWD2Q8NHY2 731 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 LHFPL5Q8TAF8 219 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 ENKURQ8TC29 256 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CIDECQ96AQ7 238 aaPredicted RBP8.15□□□□□ -1.1
RTTN-223ENST00000640931 MAP6Q96JE9 813 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 KRT12Q99456 494 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
RTTN-223ENST00000640931 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 PI4K2AQ9BTU6 479 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CADM1Q9BY67 442 aaKnown RBP8.15□□□□□ -1.1
RTTN-223ENST00000640931 Q9H521 79 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 PDLIM7Q9NR12 457 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CYP26B1Q9NR63 512 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 SDHAF3Q9NRP4 125 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 UCKL1Q9NWZ5 548 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 CDH7Q9ULB5 785 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 GRID1Q9ULK0 1009 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 VPS4AQ9UN37 437 aa8.15□□□□□ -1.1
RTTN-223ENST00000640931 ATP6V1G2-DDX39BF2Z307 99 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 H3BNX3 289 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 hCG_2039718K7EN88 272 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 RAD51CO43502 376 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 DENRO43583 198 aaKnown RBP8.15□□□□□ -1.11
RTTN-223ENST00000640931 BUD23O43709 281 aaKnown RBP8.15□□□□□ -1.11
RTTN-223ENST00000640931 FKBP6O75344 327 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 PALMO75781 387 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 INHBBP09529 407 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 MAPTP10636 758 aaKnown RBP8.15□□□□□ -1.11
RTTN-223ENST00000640931 ICAM2P13598 275 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 MUTP22033 750 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 SFNP31947 248 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 SSTR3P32745 418 aaPredicted RBP8.15□□□□□ -1.11
RTTN-223ENST00000640931 RGS7P49802 495 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 SLC26A2P50443 739 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 VAMP7P51809 220 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 RAP1GDS1P52306 607 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 COPAP53621 1224 aa8.15□□□□□ -1.11
RTTN-223ENST00000640931 SLC5A3P53794 718 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms