RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ARHGEF26Q96DR7 871 aa27.52■■■□□ 2
VEGFA-231ENST00000640499 ERLEC1Q96DZ1 483 aa27.52■■■□□ 2
VEGFA-231ENST00000640499 SSU72P8A0A1W2PR75 194 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 PRKCHP24723 683 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 MZF1P28698 734 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-231ENST00000640499 GALCP54803 685 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 SLC18A3Q16572 532 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 PITRM1Q5JRX3 1037 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 MANEALQ5VSG8 457 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 MDGA1Q8NFP4 955 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 TSTD1Q8NFU3 115 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 FNIP1Q8TF40 1166 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 ATRIPQ8WXE1 791 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 NTAN1Q96AB6 310 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 FAM122AQ96E09 287 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 TRIM11Q96F44 468 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 MYO19Q96H55 970 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 OSBPL2Q9H1P3 480 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 MPP6Q9NZW5 540 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 KIAA1522Q9P206 1035 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-231ENST00000640499 NEU3Q9UQ49 428 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 OR51B4Q9Y5P0 310 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 USP34Q70CQ2 3546 aa27.51■■□□□ 1.99
VEGFA-231ENST00000640499 CCDC163A0A0D9SF12 145 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 CYP1A2P05177 515 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 TPM1P09493 284 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 HOXB2P14652 356 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 CSKP41240 450 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 CTSOP43234 321 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-231ENST00000640499 NRG1Q02297 640 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-231ENST00000640499 SCAPQ12770 1279 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 ZNF557Q8N988 423 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-231ENST00000640499 MRGPRX3Q96LB0 322 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 PACSIN1Q9BY11 444 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 TMEM245Q9H330 911 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 OR12D3Q9UGF7 316 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 TBC1D30Q9Y2I9 924 aa27.5■■□□□ 1.99
VEGFA-231ENST00000640499 ANKRD62A6NC57 917 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 SRGAP2O75044 1071 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 PSMA2P25787 234 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 NUMBP49757 651 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 PLK1P53350 603 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 CDH4P55283 916 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 PLEKHG6Q3KR16 790 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 ANO7Q6IWH7 933 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 CNGA4Q8IV77 575 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 PYROXD2Q8N2H3 581 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 UCMAQ8WVF2 138 aa27.49■■□□□ 1.99
VEGFA-231ENST00000640499 NHEJ1Q9H9Q4 299 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-231ENST00000640499 NPC1O15118 1278 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 AXIN1O15169 862 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 CLDN11O75508 207 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 DLDP09622 509 aaKnown RBP27.48■■□□□ 1.99
VEGFA-231ENST00000640499 ACBD5Q5T8D3 534 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-231ENST00000640499 SCYL2Q6P3W7 929 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 ZC3H14Q6PJT7 736 aaKnown RBP27.48■■□□□ 1.99
VEGFA-231ENST00000640499 CYP4V2Q6ZWL3 525 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-231ENST00000640499 SLFN11Q7Z7L1 901 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 SUMF1Q8NBK3 374 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 PEBP4Q96S96 227 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 ZNHIT6Q9NWK9 470 aaKnown RBP27.48■■□□□ 1.99
VEGFA-231ENST00000640499 PPARGC1AQ9UBK2 798 aaKnown RBP27.48■■□□□ 1.99
VEGFA-231ENST00000640499 FZD10Q9ULW2 581 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 SCINQ9Y6U3 715 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 CKAP5Q14008 2032 aa27.48■■□□□ 1.99
VEGFA-231ENST00000640499 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-231ENST00000640499 TCRBV21S2A2A0A5A6 115 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 GABRG2P18507 467 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 POLR2EP19388 210 aaKnown RBP27.47■■□□□ 1.99
VEGFA-231ENST00000640499 ZNF177Q13360 481 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-231ENST00000640499 ARL13BQ3SXY8 428 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 DAB2IPQ5VWQ8 1189 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 LRRC31Q6UY01 552 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 ASCL5Q7RTU5 278 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 BTBD6Q96KE9 485 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 FEM1AQ9BSK4 669 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 TPSD1Q9BZJ3 242 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 MRPL47Q9HD33 250 aaKnown RBP27.47■■□□□ 1.99
VEGFA-231ENST00000640499 SPTLC3Q9NUV7 552 aa27.47■■□□□ 1.99
VEGFA-231ENST00000640499 ZFHX2Q9C0A1 2572 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-231ENST00000640499 LRIG2O94898 1065 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 HLA-EP13747 358 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 SDE2Q6IQ49 451 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 ZNF366Q8N895 744 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 SLC6A17Q9H1V8 727 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 EPC1Q9H2F5 836 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 POLMQ9NP87 494 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-231ENST00000640499 ERVW-1Q9UQF0 538 aa27.46■■□□□ 1.99
VEGFA-231ENST00000640499 GPR179Q6PRD1 2367 aa27.45■■□□□ 1.99
VEGFA-231ENST00000640499 SEMA3BQ13214 749 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 SLC12A1Q13621 1099 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 TSR1Q2NL82 804 aaKnown RBP27.45■■□□□ 1.98
VEGFA-231ENST00000640499 TFAP2DQ7Z6R9 452 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 NLRP14Q86W24 1093 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 CCDC117Q8IWD4 279 aaPredicted RBP27.45■■□□□ 1.98
VEGFA-231ENST00000640499 HMGB4Q8WW32 186 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 PSMB7Q99436 277 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 NUP85Q9BW27 656 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 ZYG11BQ9C0D3 744 aa27.45■■□□□ 1.98
VEGFA-231ENST00000640499 MTG2Q9H4K7 406 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms