RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	PTPN2	P17706	415 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	TACR2	P21452	398 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	SERPINB6	P35237	376 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	ACTN2	P35609	894 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	NRIP1	P48552	1158 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	BASP1	P80723	227 aa	Known RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	GAD2	Q05329	585 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	MTM1	Q13496	603 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	FAM133B	Q5BKY9	247 aa	Known RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	LGI2	Q8N0V4	545 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	ADAMTS19	Q8TE59	1207 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	LRRC45	Q96CN5	670 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	ZYG11B	Q9C0D3	744 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	SLC39A8	Q9C0K1	460 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	AGO1	Q9UL18	857 aa	Known RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	DOCK6	Q96HP0	2047 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	PPP1R12A	O14974	1030 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	TNRC18	O15417	2968 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	FGF10	O15520	208 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	TSPAN3	O60637	253 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	METTL18	O95568	372 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	RHO	P08100	348 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	GARS	P41250	739 aa	Known RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	SLC11A2	P49281	568 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	NRG1	Q02297	640 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	PRKD1	Q15139	912 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	SLC5A9	Q2M3M2	681 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	ANKRD22	Q5VYY1	191 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	RHBDF2	Q6PJF5	856 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	NLRP14	Q86W24	1093 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	ARHGAP12	Q8IWW6	846 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	RTL3	Q8N8U3	475 aa	Known RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	CPT1B	Q92523	772 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	PLD4	Q96BZ4	506 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	IGFLR1	Q9H665	355 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	RAB6B	Q9NRW1	208 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	TMEM51	Q9NW97	253 aa		10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	MTRF1L	Q9UGC7	380 aa	Known RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAP1-223	ENST00000640091	NUP205	Q92621	2012 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	IGLV3-10	A0A075B6K4	115 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	CFAP69	A5D8W1	941 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	DRGX	A6NNA5	263 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	HACD1	B0YJ81	288 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091		F5H5T6	163 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	MAP2K7	O14733	419 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	CDC25C	P30307	473 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	RPS24	P62847	133 aa	Known RBP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	GALNT2	Q10471	571 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	RAB30	Q15771	203 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	ANKRD20A2	Q5SQ80	823 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	RNASEH2B	Q5TBB1	312 aa	Known RBP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	ANKRD20A1	Q5TYW2	823 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	ANKRD20A3	Q5VUR7	823 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	PDE12	Q6L8Q7	609 aa	Known RBP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	TMC3	Q7Z5M5	1100 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	SHKBP1	Q8TBC3	707 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	RTP4	Q96DX8	246 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	NOL6	Q9H6R4	1146 aa	Known RBP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	MYO9B	Q13459	2157 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	UNC80	Q8N2C7	3258 aa		10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.74	□□□□□ -0.69
NECAP1-223	ENST00000640091	EYS	Q5T1H1	3165 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	C5orf60	A6NFR6	353 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	RNF103	O00237	685 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	NCAM2	O15394	837 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	MOSPD3	O75425	235 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	GCAT	O75600	419 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	OLFM2	O95897	454 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	RHOQ	P17081	205 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	MX2	P20592	715 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	OR1E1	P30953	314 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	HTR7	P34969	479 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	PAPOLA	P51003	745 aa	Known RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	SGSH	P51688	502 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	PPID	Q08752	370 aa	Known RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	WASHC5	Q12768	1159 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	CBX2	Q14781	532 aa	Predicted RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	TEAD2	Q15562	447 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	ADGRF1	Q5T601	910 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	UBAP2	Q5T6F2	1119 aa	Known RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	GPR158	Q5T848	1215 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	TMC5	Q6UXY8	1006 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	BBOF1	Q8ND07	529 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	GCNA	Q96QF7	691 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	SEMA4A	Q9H3S1	761 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	ETNK1	Q9HBU6	452 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	PAK5	Q9P286	719 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	CCL26	Q9Y258	94 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	GREM1	O60565	184 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	HSD17B3	P37058	310 aa		10.73	□□□□□ -0.69
NECAP1-223	ENST00000640091	HSPA9	P38646	679 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms