RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 TAF12Q16514 161 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 APPL2Q8NEU8 664 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 LPGAT1Q92604 370 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 VPS33AQ96AX1 596 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 NSUN4Q96CB9 384 aaKnown RBP11.34□□□□□ -0.59
SPIN3-230ENST00000639888 TBATAQ96M53 351 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 ZNF717Q9BY31 904 aaPredicted RBP11.34□□□□□ -0.59
SPIN3-230ENST00000639888 PCDHAC1Q9H158 963 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 NEK6Q9HC98 313 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 TOPORSQ9NS56 1045 aaPredicted RBP11.34□□□□□ -0.59
SPIN3-230ENST00000639888 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 KLHL20Q9Y2M5 609 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 CCDC162PA2VCL2 907 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 F8VP50 259 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 SLC4A1P02730 911 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 JAM2P57087 298 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 RAB14P61106 215 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 PLIN5Q00G26 463 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 ANKRD22Q5VYY1 191 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 METTL25Q8N6Q8 603 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 SNX31Q8N9S9 440 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 SLC44A1Q8WWI5 657 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 RNF145Q96MT1 663 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 LXNQ9BS40 222 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 AVENQ9NQS1 362 aaPredicted RBP11.34□□□□□ -0.59
SPIN3-230ENST00000639888 TOR4AQ9NXH8 423 aa11.34□□□□□ -0.59
SPIN3-230ENST00000639888 KANSL1LA0AUZ9 987 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 H0Y858 1186 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 CLPXO76031 633 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 KPNA2P52292 529 aaKnown RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 YWHAHQ04917 246 aaPredicted RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 LRP8Q14114 963 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 SF3B4Q15427 424 aaKnown RBP eCLIP11.33□□□□□ -0.66e-8■■■■■ 30.8
SPIN3-230ENST00000639888 SAMD4BQ5PRF9 694 aaKnown RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 GLIS1Q8NBF1 620 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 RP9Q8TA86 221 aaKnown RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ADI1Q9BV57 179 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 CNTNAP2Q9UHC6 1331 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 LTN1O94822 1766 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ASTN1O14525 1302 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 TISP43B9A030 160 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 PIGNO95427 931 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 CRYZL1O95825 349 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ASNSP08243 561 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ALAS1P13196 640 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ABCG1P45844 678 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 NDST2P52849 883 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 PTPN20Q4JDL3 420 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 FAM182AQ5T1J6 154 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 PHTF2Q8N3S3 785 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 C1orf21Q9H246 121 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 VPS33BQ9H267 617 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ASNSD1Q9NWL6 643 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 KLHL8Q9P2G9 620 aaPredicted RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 TMCC2O75069 709 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 MT-ND1P03886 318 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 TRIM32Q13049 653 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 DPYSL3Q14195 570 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 FASTKQ14296 549 aaKnown RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 SNX17Q15036 470 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 FAM102AQ5T9C2 384 aaPredicted RBP11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF720Q7Z2F6 126 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 KATNAL2Q8IYT4 538 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 ZDHHC7Q9NXF8 308 aa11.33□□□□□ -0.6
SPIN3-230ENST00000639888 NR5A2O00482 541 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 GNL1P36915 607 aaPredicted RBP11.32□□□□□ -0.6
SPIN3-230ENST00000639888 NAGLUP54802 743 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 HNRNPDQ14103 355 aaKnown RBP11.32□□□□□ -0.6
SPIN3-230ENST00000639888 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
SPIN3-230ENST00000639888 ARMCX4Q5H9R4 360 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF669Q96BR6 464 aaPredicted RBP11.32□□□□□ -0.6
SPIN3-230ENST00000639888 MTERF3Q96E29 417 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 GBA3Q9H227 469 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 ITM2CQ9NQX7 267 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 UCKL1Q9NWZ5 548 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 CACNA2D2Q9NY47 1150 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 WBP11Q9Y2W2 641 aaKnown RBP11.32□□□□□ -0.6
SPIN3-230ENST00000639888 KRT87PA6NCN2 255 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 TPP1O14773 563 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 CDH1P12830 882 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 IDH3AP50213 366 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 PRELPP51888 382 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 ZDHHC14Q8IZN3 488 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 LRRC20Q8TCA0 184 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 APBA2Q99767 749 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 TP63Q9H3D4 680 aaPredicted RBP11.32□□□□□ -0.6
SPIN3-230ENST00000639888 SIX2Q9NPC8 291 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
SPIN3-230ENST00000639888 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms