RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 PBX3P40426 434 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 GRIK3Q13003 919 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 SPRED3Q2MJR0 410 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 HEATR6Q6AI08 1181 aaKnown RBP14.26□□□□□ -0.13
ATRIP-208ENST00000639561 FAM171BQ6P995 826 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 PPP1R21Q6ZMI0 780 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 TMC7Q7Z402 723 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 OR10T2Q8NGX3 314 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 DENND1AQ8TEH3 1009 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 TMEM209Q96SK2 561 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 ELAC2Q9BQ52 826 aaKnown RBP14.26□□□□□ -0.13
ATRIP-208ENST00000639561 NKIRAS1Q9NYS0 192 aa14.26□□□□□ -0.13
ATRIP-208ENST00000639561 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
ATRIP-208ENST00000639561 CAPN9O14815 690 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 B4GALT3O60512 393 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 ASMTLO95671 621 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 C1QAP02745 245 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 CYP11A1P05108 521 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 NCAM1P13591 858 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 BDNFP23560 247 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 STX2P32856 288 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 MAGEA3P43357 314 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 ZP2Q05996 745 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 TUSC3Q13454 348 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 DPYSQ14117 519 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 INTS6LQ5JSJ4 861 aaKnown RBP14.25□□□□□ -0.13
ATRIP-208ENST00000639561 LRRTM3Q86VH5 581 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 TP53INP2Q8IXH6 220 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 VPS52Q8N1B4 723 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 TFB1MQ8WVM0 346 aaKnown RBP14.25□□□□□ -0.13
ATRIP-208ENST00000639561 HTR3CQ8WXA8 447 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 FAM193BQ96PV7 902 aaPredicted RBP14.25□□□□□ -0.13
ATRIP-208ENST00000639561 ACBD6Q9BR61 282 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 SENP1Q9P0U3 644 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 CLEC1BQ9P126 229 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 PTPRDP23468 1912 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 M0QZQ0 153 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 TYROBPO43914 113 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 GLP2RO95838 553 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 LTFP02788 710 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 KRT4P19013 534 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 FOXN2P32314 431 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 RPA3P35244 121 aaPredicted RBP14.25□□□□□ -0.13
ATRIP-208ENST00000639561 ADRA1BP35368 520 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 LIG3P49916 1009 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 YWHAGP61981 247 aaKnown RBP eCLIP14.25□□□□□ -0.13
ATRIP-208ENST00000639561 KBTBD12Q3ZCT8 623 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 RFX8Q6ZV50 586 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 PRPF39Q86UA1 669 aaKnown RBP14.25□□□□□ -0.13
ATRIP-208ENST00000639561 OTUD6BQ8N6M0 293 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 SMRP1Q8NCR6 262 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 CCDC197Q8NCU1 140 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 EDEM1Q92611 657 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 SGSM3Q96HU1 749 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 SMC6Q96SB8 1091 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 TMEM175Q9BSA9 504 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 GRID1Q9ULK0 1009 aa14.25□□□□□ -0.13
ATRIP-208ENST00000639561 H3BRJ5 948 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 PER2O15055 1255 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SNX3O60493 162 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 GRIA1P42261 906 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SEMA3BQ13214 749 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 PRKD1Q15139 912 aaPredicted RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 RNF187Q5TA31 235 aaPredicted RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 NUGGCQ68CJ6 796 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 TMEM184AQ6ZMB5 413 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 MCUQ8NE86 351 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 CFAP36Q96G28 342 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 CYTH2Q99418 400 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 TRIM56Q9BRZ2 755 aaKnown RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 FRMD8Q9BZ67 464 aaPredicted RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 BDP1A6H8Y1 2624 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 XIRP2A4UGR9 3374 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 HACD1B0YJ81 288 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 F5H423 210 aaPredicted RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 DCLK1O15075 740 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 OAS1P00973 400 aaKnown RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 GALTP07902 379 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 MSH2P43246 934 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 MAGEA9P43362 315 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SCAPQ12770 1279 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SEMA5AQ13591 1074 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 ZKSCAN8Q15776 578 aaPredicted RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 C4orf22Q6V702 233 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 DENND5BQ6ZUT9 1274 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 DDX53Q86TM3 631 aaKnown RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 NTAN1Q96AB6 310 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 PGAP3Q96FM1 320 aaPredicted RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 IGSF21Q96ID5 467 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 MAGEB18Q96M61 343 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 CEP41Q9BYV8 373 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 CD320Q9NPF0 282 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 DDIT4Q9NX09 232 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SAMD15Q9P1V8 674 aa14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SMG5Q9UPR3 1016 aaKnown RBP14.24□□□□□ -0.13
ATRIP-208ENST00000639561 SF3B1O75533 1304 aaKnown RBP eCLIP14.23□□□□□ -0.13
ATRIP-208ENST00000639561 A0A0A0MRY4 1105 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms