RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 KRT10P13645 584 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ZNF182P17025 639 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 RPL22P35268 128 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 IDUAP35475 653 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 NME5P56597 212 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L24Q0WX57 530 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 PPIL2Q13356 520 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 NFIXQ14938 502 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 KAZNQ674X7 775 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 KIAA1841Q6NSI8 718 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L6PQ6QN14 398 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 EPGNQ6UW88 154 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 IGDCC3Q8IVU1 814 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 MYO1HQ8N1T3 1032 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 NLGN1Q8N2Q7 840 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ESX1Q8N693 406 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SNX31Q8N9S9 440 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 FEZF2Q8TBJ5 459 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 HCAR2Q8TDS4 363 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SLC16A10Q8TF71 515 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 RASSF5Q8WWW0 418 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ATL1Q8WXF7 558 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ASB9Q96DX5 294 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ADAMTS10Q9H324 1103 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 BCAS3Q9H6U6 928 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 CPNE5Q9HCH3 593 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
CAPN3-221ENST00000638141 ANGPTL3Q9Y5C1 460 aa12.28□□□□□ -0.44
CAPN3-221ENST00000638141 USP17L10C9JJH3 530 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 K7ENM7 598 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 PLOD2O00469 737 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 TRIM38O00635 465 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 TADA2AO75478 443 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 TOM1L1O75674 476 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 ALX3O95076 343 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 IFNB1P01574 187 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 RALBP11234 206 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 NCF2P19878 526 aaPredicted RBP12.27□□□□□ -0.44
CAPN3-221ENST00000638141 M6PRP20645 277 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 KLRK1P26718 216 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 RHDQ02161 417 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 TAP1Q03518 808 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 C4orf22Q6V702 233 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 PLEKHG7Q6ZR37 379 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 PRR23CQ6ZRP0 262 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 POLNQ7Z5Q5 900 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 ZC3H7AQ8IWR0 971 aaKnown RBP12.27□□□□□ -0.44
CAPN3-221ENST00000638141 LRRC47Q8N1G4 583 aaKnown RBP12.27□□□□□ -0.44
CAPN3-221ENST00000638141 TMCO5AQ8N6Q1 288 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 GOLM1Q8NBJ4 401 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 RDH13Q8NBN7 331 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 SEMA4DQ92854 862 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 VMP1Q96GC9 406 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 LENG8Q96PV6 779 aaPredicted RBP12.27□□□□□ -0.44
CAPN3-221ENST00000638141 HERC2P3Q9BVR0 1158 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 SHCBP1LQ9BZQ2 653 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 MARCH7Q9H992 704 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 POLR1BQ9H9Y6 1135 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 SLC38A10Q9HBR0 1119 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 TCAF1Q9Y4C2 921 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.44
CAPN3-221ENST00000638141 C6orf229H3BNL8 230 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 MTRF1O75570 445 aaKnown RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 SEC14L2O76054 403 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 MMP10P09238 476 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 MYCLP1P12525 358 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 BMP2P12643 396 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 CXCR2P25025 360 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 PIK3R1P27986 724 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 SLC7A1P30825 629 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 CDKN2BP42772 138 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 OTUD4Q01804 1114 aaKnown RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 C6orf10Q5SRN2 563 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 INTS11Q5TA45 600 aaKnown RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 ZCCHC23Q6ZST2 131 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 C14orf80Q86SX3 495 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 CCDC60Q8IWA6 550 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 ADGRF2Q8IZF7 708 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 NDUFAF2Q8N183 169 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 ZNF786Q8N393 782 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-221ENST00000638141 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 CDY2AQ9Y6F7 541 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 CDY1Q9Y6F8 540 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 IVNS1ABPQ9Y6Y0 642 aa12.27□□□□□ -0.45
CAPN3-221ENST00000638141 WTIPA6NIX2 430 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 FAM86B1E9PN63 330 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 NOP56O00567 594 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
CAPN3-221ENST00000638141 TEX28O15482 410 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 ENTPD3O75355 529 aa12.26□□□□□ -0.45
CAPN3-221ENST00000638141 LYPLA1O75608 230 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms