RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 A0A1B0GTH6 734 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ENTPD3O75355 529 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ICAM1P05362 532 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 SCIMPQ6UWF3 145 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 HHIPL2Q6UWX4 724 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 KCTD8Q6ZWB6 473 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ADGRG2Q8IZP9 1017 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 KRT35Q92764 455 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 GPAMQ9HCL2 828 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 PDGFCQ9NRA1 345 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 JCHAINP01591 159 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 NETO2Q8NC67 525 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 CLTCQ00610 1675 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 FOXN3O00409 490 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 NT5C2P49902 561 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 C10orf88Q9H8K7 445 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ANKDD1BA6NHY2 528 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 SSNA1O43805 119 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 NFIAQ12857 509 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 C1DQ13901 141 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 DEFB119Q8N690 84 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 DKK3Q9UBP4 350 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 SEPT3Q9UH03 358 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 C3orf18Q9UK00 162 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ADAM30Q9UKF2 790 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 IL1BP01584 269 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 GYPCP04921 128 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 MYL12AP19105 171 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 GEMP55040 296 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 LAMB3Q13751 1172 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ENKURQ8TC29 256 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 TMEM159Q96B96 161 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 GPER1Q99527 375 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 SIRPGQ9P1W8 387 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 BTN3A3O00478 584 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 NTSR2O95665 410 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 TKTL1P51854 596 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ABRQ12979 859 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 SLC39A12Q504Y0 691 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 RAET1GQ6H3X3 334 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 GET4Q7L5D6 327 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 FAM92AA1XBS5 289 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ANXA9O76027 345 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 CALCAP01258 141 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 BEX3Q00994 111 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ACAP1Q15027 740 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 PRR23BQ6ZRT6 265 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 DDX18Q9NVP1 670 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 USP18Q9UMW8 372 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 CROCC2H7BZ55 1655 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 MYL12BO14950 172 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 LRATO95237 230 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 POLR2EP19388 210 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 TPP2P29144 1249 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 MYL6P60660 151 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 MPZL3Q6UWV2 235 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 SPOCD1Q6ZMY3 1216 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF34Q8IZ26 560 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 OSBPL2Q9H1P3 480 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 CHMP1AQ9HD42 196 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 HEY2Q9UBP5 337 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 FAM50BQ9Y247 325 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 SPHKAPQ2M3C7 1700 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 CCDC189A1A4V9 331 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 KPNA6O60684 536 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 CYP2C8P10632 490 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 GSTM5P46439 218 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 PSEN2P49810 448 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF563Q8TA94 476 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 MRPL48Q96GC5 212 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 EMILIN2Q9BXX0 1053 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 RNF208Q9H0X6 261 aa17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 UBQLN1Q9UMX0 589 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-253ENST00000637927 KIAA0391O15091 583 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 EIF3DO15371 548 aaKnown RBP eCLIP17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 ZBTB11O95625 1053 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF806P0C7X5 589 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 RPL10AP62906 217 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 TFDP3Q5H9I0 405 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 COL23A1Q86Y22 540 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 ATL1Q8WXF7 558 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 PTPN5P54829 565 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 PTGISQ16647 500 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 STYK1Q6J9G0 422 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 LINC00523Q86TU6 105 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 CXorf40AQ8TE69 158 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 SLC20A1Q8WUM9 679 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 CLCC1Q96S66 551 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 VAV3Q9UKW4 847 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 A0A0B4J269 797 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 FFAR3O14843 346 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 GPR42O15529 346 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 PLOD3O60568 738 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 ITGALP20701 1170 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 MRNIPQ6NTE8 343 aa17.29■□□□□ 0.36
CACNA1A-253ENST00000637927 ADGRG6Q86SQ4 1221 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms