RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 FSCBQ5H9T9 825 aa19.57■□□□□ 0.72
CLN6-221ENST00000637494 FAM102AQ5T9C2 384 aaPredicted RBP19.57■□□□□ 0.72
CLN6-221ENST00000637494 CCAR2Q8N163 923 aaKnown RBP19.57■□□□□ 0.72
CLN6-221ENST00000637494 PCMTD1Q96MG8 357 aaPredicted RBP19.57■□□□□ 0.72
CLN6-221ENST00000637494 NAA15Q9BXJ9 866 aaKnown RBP19.57■□□□□ 0.72
CLN6-221ENST00000637494 WDCPQ9H6R7 721 aa19.57■□□□□ 0.72
CLN6-221ENST00000637494 SGK2Q9HBY8 427 aa19.57■□□□□ 0.72
CLN6-221ENST00000637494 FSCN3Q9NQT6 498 aa19.57■□□□□ 0.72
CLN6-221ENST00000637494 INTS6Q9UL03 887 aaKnown RBP19.57■□□□□ 0.72
CLN6-221ENST00000637494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 F8VZ95 297 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 MBD3O95983 291 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 CDH5P33151 784 aaPredicted RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 SULT1E1P49888 294 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 ZNF177Q13360 481 aaPredicted RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 STX1AQ16623 288 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 BRMS1LQ5PSV4 323 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 CDKAL1Q5VV42 579 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 DPY19L2P1Q6NXN4 242 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 MMS22LQ6ZRQ5 1243 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 ZNF677Q86XU0 584 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 DHX40Q8IX18 779 aaKnown RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 ZCCHC9Q8N567 271 aaKnown RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 GPT2Q8TD30 523 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 SPAG5Q96R06 1193 aa19.56■□□□□ 0.72
CLN6-221ENST00000637494 PRMT1Q99873 361 aaKnown RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 RSPH9Q9H1X1 276 aaPredicted RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 MUC22E2RYF6 1773 aaPredicted RBP19.56■□□□□ 0.72
CLN6-221ENST00000637494 BCAT2O15382 392 aaPredicted RBP19.55■□□□□ 0.72
CLN6-221ENST00000637494 SIN3BO75182 1162 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 SEMA4FO95754 770 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 PDGFRAP16234 1089 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 CDK11BP21127 795 aaKnown RBP19.55■□□□□ 0.72
CLN6-221ENST00000637494 GABRB2P47870 512 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 DEUP1Q05D60 604 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 AUHQ13825 339 aaKnown RBP19.55■□□□□ 0.72
CLN6-221ENST00000637494 ARID5BQ14865 1188 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 KRT31Q15323 416 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 ACBD5Q5T8D3 534 aaPredicted RBP19.55■□□□□ 0.72
CLN6-221ENST00000637494 FBXL22Q6P050 247 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
CLN6-221ENST00000637494 USP30Q70CQ3 517 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 APCDD1Q8J025 514 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 DEFB124Q8NES8 71 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 MRGPRX3Q96LB0 322 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 CNTNAP3BQ96NU0 1288 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 CNTNAP3Q9BZ76 1288 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 SIK2Q9H0K1 926 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 EIF2B4Q9UI10 523 aaKnown RBP19.55■□□□□ 0.72
CLN6-221ENST00000637494 SLC25A13Q9UJS0 675 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 VANGL2Q9ULK5 521 aa19.55■□□□□ 0.72
CLN6-221ENST00000637494 UPK3BL1B0FP48 263 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 UPK3BL2E5RIL1 263 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 GIPC1O14908 333 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 PAGE1O75459 146 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 CLDN11O75508 207 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 C7P10643 843 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 PMLP29590 882 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 ACSL1P33121 698 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 RDXP35241 583 aaKnown RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 POLR2FP61218 127 aaKnown RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 MYL5Q02045 173 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 SLC14A1Q13336 389 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 HNRNPDQ14103 355 aaKnown RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 IL27RAQ6UWB1 636 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 LRRC31Q6UY01 552 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 NOP9Q86U38 636 aaKnown RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 CIR1Q86X95 450 aaPredicted RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 MYO19Q96H55 970 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 RPL10LQ96L21 214 aaKnown RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 NPY6RQ99463 290 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 OMDQ99983 421 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 TKTL2Q9H0I9 626 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 PABPC3Q9H361 631 aaKnown RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 FAM207AQ9NSI2 230 aaPredicted RBP19.54■□□□□ 0.72
CLN6-221ENST00000637494 FANCLQ9NW38 375 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 HS3ST4Q9Y661 456 aa19.54■□□□□ 0.72
CLN6-221ENST00000637494 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 TTC34A8MYJ7 566 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 GOLGA8SH3BPF8 625 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 GFPT2O94808 682 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 CTSOP43234 321 aaPredicted RBP19.53■□□□□ 0.72
CLN6-221ENST00000637494 SEMA3BQ13214 749 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 TEAD4Q15561 434 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 CST6Q15828 149 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 SLC25A52Q3SY17 297 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 XYLT1Q86Y38 959 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 PGAP3Q96FM1 320 aaPredicted RBP19.53■□□□□ 0.72
CLN6-221ENST00000637494 GANQ9H2C0 597 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 MTG2Q9H4K7 406 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 C6orf106Q9H6K1 298 aaPredicted RBP19.53■□□□□ 0.72
CLN6-221ENST00000637494 PIGVQ9NUD9 493 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 DNAAF2Q9NVR5 837 aaKnown RBP19.53■□□□□ 0.72
CLN6-221ENST00000637494 FBXL12Q9NXK8 326 aa19.53■□□□□ 0.72
CLN6-221ENST00000637494 FSBPO95073 299 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 CER1O95813 267 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 ADH1BP00325 375 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 MMEP08473 750 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 MZF1P28698 734 aaPredicted RBP19.52■□□□□ 0.72
CLN6-221ENST00000637494 SOX5P35711 763 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms