RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 PLPPR4Q7Z2D5 763 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NCAPG2Q86XI2 1143 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GALNT15Q8N3T1 639 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 EMC1Q8N766 993 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 JOSD2Q8TAC2 188 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SLC26A7Q8TE54 656 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TFB1MQ8WVM0 346 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RTP4Q96DX8 246 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SERAC1Q96JX3 654 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 APOL6Q9BWW8 343 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NMUR2Q9GZQ4 415 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DHX35Q9H5Z1 703 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DNAJC28Q9NX36 388 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ETAA1Q9NY74 926 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 BFARQ9NZS9 450 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SIRPGQ9P1W8 387 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RCOR3Q9P2K3 495 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TLK1Q9UKI8 766 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DNAJC16Q9Y2G8 782 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TMEM114B3SHH9 223 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 FAM189A1O60320 539 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CILPO75339 1184 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GCATO75600 419 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 AMHP03971 560 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ITGB3P05106 788 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MPOP05164 745 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 EDN1P05305 212 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 THRAP10827 490 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 UBA1P22314 1058 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MAGEA6P43360 314 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SLC1A6P48664 564 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CDC42EP1Q00587 391 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CNTN2Q02246 1040 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ZNF252P-AS1Q0IIN9 211 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MAPRE2Q15555 327 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GRAMD1BQ3KR37 738 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DCAF4L1Q3SXM0 396 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MMEL1Q495T6 779 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 LRRC23Q53EV4 343 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SPANXN3Q5MJ09 141 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TEDDM1Q5T9Z0 273 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GRTP1Q5TC63 336 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MROH9Q5TGP6 573 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 C16orf87Q6PH81 154 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CATSPERGQ6ZRH7 1159 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SH2D5Q6ZV89 423 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DHDDSQ86SQ9 333 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 FAM172AQ8WUF8 416 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NLRP7Q8WX94 980 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 PPP1R2P1Q96PQ5 205 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NELL2Q99435 816 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 HAUS8Q9BT25 410 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 EFHD1Q9BUP0 239 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 BCO2Q9BYV7 579 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 HAPLN2Q9GZV7 340 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 BRD8Q9H0E9 1235 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SNX25Q9H3E2 840 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NSUN3Q9H649 340 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RUBCNLQ9H714 662 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SMYD3Q9H7B4 428 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 PLAC1Q9HBJ0 212 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DMAP1Q9NPF5 467 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 EIF2B3Q9NR50 452 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 FBXO6Q9NRD1 293 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 STAP1Q9ULZ2 295 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NOD1Q9Y239 953 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 C2CD2Q9Y426 696 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TTLL3Q9Y4R7 772 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 COMMD3-BMI1R4GMX3 469 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MCM3APO60318 1980 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 FAM159BA6NKW6 160 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CFHP08603 1231 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 AOC1P19801 751 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CYP2F1P24903 491 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SCNN1AP37088 669 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GP5P40197 560 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MTHFRP42898 656 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ETV4P43268 484 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CPA2P48052 419 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 EPHB1P54762 984 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GDF10P55107 478 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 COG7P83436 770 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SLC6A3Q01959 620 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MAP7D1Q3KQU3 841 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 LCLAT1Q6UWP7 414 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DSTYKQ6XUX3 929 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MARK2Q7KZI7 788 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 PSTKQ8IV42 348 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RBM15BQ8NDT2 890 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MIPOL1Q8TD10 442 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DDI1Q8WTU0 396 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TFAP2BQ92481 460 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ZFRQ96KR1 1074 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RIPOR3Q96MK2 946 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ZNF560Q96MR9 790 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 BTBD9Q96Q07 612 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CPXM1Q96SM3 734 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CPNE1Q99829 537 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ARMCX1Q9P291 453 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms